Contig 007397:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF027J16Sequence558007397 (2)ref|XP_002524051.1|7e-23conserved hypothetical protein [Ricinus communis] gb|EEF38419.1| conserved hypot
JMFF042F19Sequence629007397 (2)ref|XP_009776656.1|1e-82PREDICTED: uncharacterized protein LOC104226377 isoform X2 [Nicotiana sylvestri

Alignment

This contig is upended


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JMFF042F19+                GAATCAAAAAGATCCCTGTTCGCAACATCCAGCAAAGACTGTAGATGGGAGGAAT
                      ____________________________________________________________
consensus                  GAATCAAAAAGATCCCTGTTCGCAACATCCAGCAAAGACTGTAGATGGGAGGAAT
 
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JMFF042F19+           GAGAAAGCTGAGCATTCAATGAACTCTGCAATTCTACAATCTGCTCCTGCATCTCTAGTA
                      ____________________________________________________________
consensus             GAGAAAGCTGAGCATTCAATGAACTCTGCAATTCTACAATCTGCTCCTGCATCTCTAGTA
 
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JMFF042F19+           TCATTTCATCCCTTCTCTTCACCTGTTGTCTCAGCTTTTGTATTACTTCTCGCTTGCTGA
                      ____________________________________________________________
consensus             TCATTTCATCCCTTCTCTTCACCTGTTGTCTCAGCTTTTGTATTACTTCTCGCTTGCTGA
 
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JMFF042F19+           AAATGTCAGAACCAGATTCGGAGACACACGGTGACTCAGAGCCATTTGAGAGGTGCAATG
                      ____________________________________________________________
consensus             AAATGTCAGAACCAGATTCGGAGACACACGGTGACTCAGAGCCATTTGAGAGGTGCAATG
 
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JMFF042F19+           GCTTCTGCGGCAGCTCAAGACGATCTACGGAGGATGACCATGCCCCACCGTTTTCTCTGC
                      ____________________________________________________________
consensus             GCTTCTGCGGCAGCTCAAGACGATCTACGGAGGATGACCATGCCCCACCGTTTTCTCTGC
 
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JMFF042F19+           TGAATTCAAGCGAAGGGACAGTCACGAGAGGAAGTTCTGTTTCACTTTCTGTTAGTACTT
                      ____________________________________________________________
consensus             TGAATTCAAGCGAAGGGACAGTCACGAGAGGAAGTTCTGTTTCACTTTCTGTTAGTACTT
 
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JMFF042F19+           GGCCATTGCACTGCTGTTTCATATCCATCACGTCTCTAGTTCCTGAAAGGAAATTATAGC
                      ____________________________________________________________
consensus             GGCCATTGCACTGCTGTTTCATATCCATCACGTCTCTAGTTCCTGAAAGGAAATTATAGC
 
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JMFF042F19+           AGTTTTCATCATCTTGGTTGAAACAGTATGAACTTGACTGTAAATGGCAATTCCTAGCTT
JMFF027J16+                                                     AATGGCAATTCCTAGCTT
                      ____________________________________________________________
consensus             AGTTTTCATCATCTTGGTTGAAACAGTATGAACTTGACTGTAAATGGCAATTCCTAGCTT
 
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JMFF042F19+           TCTTTCTCTCAGCAGGTTTATTATTTTCTTTTGAAGTGTTGCCGGTAGTGTTCTGTTGTT
JMFF027J16+           TCTTTCTCTCAGCAGGTTTATTATTTTCTTTTGAAGTGTTGCCGGTAGTGTTCTGTTGTT
                      ____________________________________________________________
consensus             TCTTTCTCTCAGCAGGTTTATTATTTTCTTTTGAAGTGTTGCCGGTAGTGTTCTGTTGTT
 
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JMFF042F19+           TTGCATCAAGCACCTGCTTGAGCTTGTAGCCCAAGCGAACTGACAAGGTACTCAGTAAAG
JMFF027J16+           TTGCATCAAGCACCTGCTTGAGCTTGTAGCCCAAGCGAACTGACAAGGTACTCAGTAAAG
                      ____________________________________________________________
consensus             TTGCATCAAGCACCTGCTTGAGCTTGTAGCCCAAGCGAACTGACAAGGTACTCAGTAAAG
 
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JMFF042F19+           CACCACCCGCAATTAGGACCCAGTTTGGCCCCTC                          
JMFF027J16+           CACCACCCGCAATTAGGACCCAGTTTGGCCCCTCACCCTGTAAAGCTTTAGACTTCTGGG
                      ____________________________________________________________
consensus             CACCACCCGCAATTAGGACCCAGTTTGGCCCCTCACCCTGTAAAGCTTTAGACTTCTGGG
 
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JMFF027J16+           CTCTAGATGTCCCATTGGCTCTTGATTTCATTTTGTGAGTTGCCAGAGTATTGAATAATA
                      ____________________________________________________________
consensus             CTCTAGATGTCCCATTGGCTCTTGATTTCATTTTGTGAGTTGCCAGAGTATTGAATAATA
 
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JMFF027J16+           TAGTTGCAGATCACGAACATAAACGTACAGAAGAAAAGCAGCATACTACATCAAACTGCA
                      ____________________________________________________________
consensus             TAGTTGCAGATCACGAACATAAACGTACAGAAGAAAAGCAGCATACTACATCAAACTGCA
 
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JMFF027J16+           CCAGCCAGTATGCTCTGCTTCACATCTTCAGATAGCTCTTTACTATGTAATATGTTACTC
                      ____________________________________________________________
consensus             CCAGCCAGTATGCTCTGCTTCACATCTTCAGATAGCTCTTTACTATGTAATATGTTACTC
 
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JMFF027J16+           ATACATCAATTCTCTCACAAAAGCACTTTCTTGTTGTTCTCGACGAAATGAGGAAATCCA
                      ____________________________________________________________
consensus             ATACATCAATTCTCTCACAAAAGCACTTTCTTGTTGTTCTCGACGAAATGAGGAAATCCA
 
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JMFF027J16+           GAATCGGCTGATTGATTTCTGTGTTTCGGTTCAGAAATGAATGTTTGCGGGTTAGGGTTT
                      ____________________________________________________________
consensus             GAATCGGCTGATTGATTTCTGTGTTTCGGTTCAGAAATGAATGTTTGCGGGTTAGGGTTT
 
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JMFF027J16+           GTGGATTGAAAAAAGTGAGAATGAATGAGAGATGTAGAGCAGCGTAAAGCAGGTAAAGGC
                      ____________________________________________________________
consensus             GTGGATTGAAAAAAGTGAGAATGAATGAGAGATGTAGAGCAGCGTAAAGCAGGTAAAGGC