Contig 007396:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF004M21Sequence533007396 (6)ref|XP_006342320.1|3e-72PREDICTED: TBCC domain-containing protein 1-like isoform X1 [Solanum tuberosum]714001045 (4)ref|XP_011075175.1|1e-32PREDICTED: TBCC domain-containing protein 1-like [Sesamum indicum]
JMFF008C09Sequence597007396 (6)ref|XP_006342320.1|9e-87PREDICTED: TBCC domain-containing protein 1-like isoform X1 [Solanum tuberosum]743001045 (4)ref|XP_011075175.1|5e-34PREDICTED: TBCC domain-containing protein 1-like [Sesamum indicum]
JMFF018C16Sequence592007396 (6)ref|XP_006342320.1|9e-86PREDICTED: TBCC domain-containing protein 1-like isoform X1 [Solanum tuberosum]742001045 (4)ref|XP_011075175.1|5e-35PREDICTED: TBCC domain-containing protein 1-like [Sesamum indicum]
JMFF027G06Sequence554007396 (6)ref|XP_006342320.1|1e-76PREDICTED: TBCC domain-containing protein 1-like isoform X1 [Solanum tuberosum]679007396 (6)ref|XP_006342320.1|2e-106PREDICTED: TBCC domain-containing protein 1-like isoform X1 [Solanum tuberosum]
JMSF003P16Sequence248007396 (6)ref|XP_006342320.1|4e-16PREDICTED: TBCC domain-containing protein 1-like isoform X1 [Solanum tuberosum]710001045 (4)ref|XP_011075175.1|1e-32PREDICTED: TBCC domain-containing protein 1-like [Sesamum indicum]

Alignment

This contig is upended


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rJMFF027G06-                                             GTGATTCTTCTGCCTCTCCTTCAAC
                      ____________________________________________________________
consensus                                                GTGATTCTTCTGCCTCTCCTTCAAC
 
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rJMFF027G06-          TGAGTCAGCCAAAAGAGAGAGAATGTTGCCCACATGCTTCTGTAAATAGGATAACTGATG
                      ____________________________________________________________
consensus             TGAGTCAGCCAAAAGAGAGAGAATGTTGCCCACATGCTTCTGTAAATAGGATAACTGATG
 
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rJMFF027G06-          AGCCTCTTCATCAGATTGTGATGGCATGAACCTACGACTATTGCTGCGTACAAGTTGCAG
JMFF008C09+                  TCATCAGATTGTGATGGCATGAACCTACGACTATTGCTGCGTACAAGTTGCAG
JMFF018C16+                  TCATCAGATTGTGATGGCATGAACCTACGACTATTGCTGCGTACAAGTTGCAG
JMFF027G06+                                                         CGTACAAGTTGCAG
                      ____________________________________________________________
consensus             AGCCTCTTCATCAGATTGTGATGGCATGAACCTACGACTATTGCTGCGTACAAGTTGCAG
 
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rJMFF027G06-          TGGCGAAAGGGCAGATAAGAACCCATCAAACGCAGAAGTGGACGGCCAAACATCGGCGAC
JMFF008C09+           TGGCGAAAGGGCAGATAAGAACCCATCAAACGCAGAAGTGGACGGCCAAACATCGGCGAC
JMFF004M21+                 AAGGGCAGATAAGANCCCATCAAACGCAGAAGTGGACGGCCAAACATCGGCGAC
JMFF018C16+           TGGCGAAAGGGCAGATAAGAACCCATCAAACGCAGAAGTGGACGGCCAAACATCGGCGAC
JMFF027G06+           TGGCGAAAGGGCAGATAAGAACCCATCAAACGCAGAAGTGGACGGCCAAACATCGGCGAC
                      ____________________________________________________________
consensus             TGGCGAAAGGGCAGATAAGAACCCATCAAACGCAGAAGTGGACGGCCAAACATCGGCGAC
 
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rJMFF027G06-          TGCAGCGGAGTCCTTATGCCCCTTGGGAAGCAACCTCTTATAACTCTGAATGTACAGAAA
JMFF008C09+           TGCAGCGGAGTCCTTATGCCCCTTGGGAAGCAACCTCTTATAACTCTGAATGTACAGAAA
JMFF004M21+           TGCAGCGGAGTCCTTATGCCCCTTGGGAAGCAACCTCTTATAACTCTGAATGTACAGAAA
JMFF018C16+           TGCAGCGGAGTCCTTATGCCCCTTGGGAAGCAACCTCTTATAACTCTGAATGTACAGAAA
JMFF027G06+           TGCAGCGGAGTCCTTATGCCCCTTGGGAAGCAACCTCTTATAACTCTGAATGTACAGAAA
                      ____________________________________________________________
consensus             TGCAGCGGAGTCCTTATGCCCCTTGGGAAGCAACCTCTTATAACTCTGAATGTACAGAAA
 
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rJMFF027G06-          CACCACCAAATCGAACACATTCACGCCGACGGAATCAACCTCGGCGGGATTGGCAGAGAC
JMFF008C09+           CACCACCAAATCGAACACATTCACGCCGACGGAATCAACCTCGGCGGGATTGGCAGAGAC
JMFF004M21+           CACCACCAAATCGAACACATTCACGCCGACGGAATCAACCTCGGCGGGATTGGCAGAGAC
JMFF018C16+           CACCACCAAATCGAACACATTCACGCCGACGGAATCAACCTCGGCGGGATTGGCAGAGAC
JMFF027G06+           CACCACCAAATCGAACACATTCACGCCGACGGAATCAACCTCGGCGGGATTGGCAGAGAC
                      ____________________________________________________________
consensus             CACCACCAAATCGAACACATTCACGCCGACGGAATCAACCTCGGCGGGATTGGCAGAGAC
 
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rJMFF027G06-          GAGGGGATCCGATTCGTTGTGCAGAACGGCGGCAACAGTTTCGAGCACAAGGCGCGCGTG
JMFF008C09+           GAGGGGATCCGATTCGTTGTGCAGAACGGCGGCAACAGTTTCGAGCACAAGGCGCGCGTG
JMFF004M21+           GAGGGGATCCGATTCGTTGTGCAGAACGGCGGCAACAGTTTCGAGCACAAGGCGCGCGTG
JMFF018C16+           GAGGGGATCCGATTCGTTGTGCAGAACGGCGGCAACAGTTTCGAGCACAAGGCGCGCGTG
JMFF027G06+           GAGGGGATCCGATTCGTTGTGCAGAACGGCGGCAACAGTTTCGAGCACAAGGCGCGCGTG
                      ____________________________________________________________
consensus             GAGGGGATCCGATTCGTTGTGCAGAACGGCGGCAACAGTTTCGAGCACAAGGCGCGCGTG
 
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rJMFF027G06-          GTCAGGTGAGATCTGAAGCGTCTCCGAAACGGATTTCGAGTTGACACGGTGAGCAGAGTC
JMFF008C09+           GTCAGGTGAGATCTGAAGCGTCTCCGAAACGGATTTCGAGTTGACACGGTGAGCAGAGTC
JMFF004M21+           GTCAGGTGAGATCTGAAGCGTCTCCGAAACGGATTTCGAGTTGACACGGTGAGCAGAGTC
JMSF003P16+                                                            TGAGCAGAGTC
JMFF018C16+           GTCAGGTGAGATCTGAAGCGTCTCCGAAACGGATTTCGAGTTGACACGGTGAGCAGAGTC
JMFF027G06+           GTCAGGTGAGATCTGAAGCGTCTCCGAAACGGATTTCGAGTTGACACGGTGAGCAGAGTC
                      ____________________________________________________________
consensus             GTCAGGTGAGATCTGAAGCGTCTCCGAAACGGATTTCGAGTTGACACGGTGAGCAGAGTC
 
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rJMFF027G06-          GGCAGAGAGCGACAAGAGCTTGTCCTTGATCGGGCCTAGGGTTTGCGTGCCGTCGGTGAA
JMFF008C09+           GGCAGAGAGCGACAAGAGCTTGTCCTTGATCGGGCCTAGGGTTTGCGTGCCGTCGGTGAA
JMFF004M21+           GGCAGAGAGCGACAAGAGCTTGTCCTTGATCGGGCCTAGGGTTTGCGTGCCGTCGGTGAA
JMSF003P16+           GGCAGAGAGCGACAAGAGCTTGTCCTTGATCGGGCCTAGGGTTTGCGTGCCGTCGGTGAA
JMFF018C16+           GGCAGAGAGCGACAAGAGCTTGTCCTTGATCGGGCCTAGGGTTTGCGTGCCGTCGGTGAA
JMFF027G06+           GGCAGAGAGCGACAAGAGCTTGTCCTTGATCGGGCCTAGGGTTTGCGTGCCGTCGGTGAA
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consensus             GGCAGAGAGCGACAAGAGCTTGTCCTTGATCGGGCCTAGGGTTTGCGTGCCGTCGGTGAA
 
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rJMFF027G06-          TATGAGCTTCGTAATTTGGAGAAGGCCGTGCTCGAACGGCTCTCGCCGCGGATGGATATA
JMFF008C09+           TATGAGCTTCGTAATTTGGAGAAGGCCGTGCTCGAACGGCTCTCGCCGCGGATGGATATA
JMFF004M21+           TATGAGCTTCGTAATTTGGAGAAGGCCGTGCTCGAACGGCTCTCGCCGCGGATGGATATA
JMSF003P16+           TATGAGCTTCGTAATTTGGAGAAGGCCGTGCTCGAACGGCTCTCGCCGCGGATGGATATA
JMFF018C16+           TATGAGCTTCGTAATTTGGAGAAGGCCGTGCTCGAACGGCTCTCGCCGCGGATGGATATA
JMFF027G06+           TATGAGCTTCGTAATTTGGAGAAGGCCGTGCTCGAACGGCTCTCGCCGCGGATGGATATA
                      ____________________________________________________________
consensus             TATGAGCTTCGTAATTTGGAGAAGGCCGTGCTCGAACGGCTCTCGCCGCGGATGGATATA
 
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rJMFF027G06-          AATTGGCTCTGCGGTTCCGGCGGCGTACGGCGTCGACGGTGACGGTGACGGTGACGGTGG
JMFF008C09+           AATTGGCTCTGCGGTTCCGGCGGCGTACGGCGTCGACGGTGACGGTGACGGTGACGGTGG
JMFF004M21+           AATTGGCTCTGCGGTTCCGGCGGCGTACGGCGTCGACGGTGACGGTGACGGTGACGGTGG
JMSF003P16+           AATTGGCTCTGCGGTTCCGGCGGCGTACGGCGTCGACGGTGACGGTGACGGTGACGGTGG
JMFF018C16+           AATTGGCTCTGCGGTTCCGGCGGCGTACGGCGTCGACGGTGACGGTGACGGTGACGGTGG
JMFF027G06+           AATTGGCTCTGCGGTTCCGGCGGCGTACGGCGTCGACGGTGACGGTGACGGTGACGGTGG
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consensus             AATTGGCTCTGCGGTTCCGGCGGCGTACGGCGTCGACGGTGACGGTGACGGTGACGGTGG
 
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rJMFF027G06-          TTCGGTAGCGTTCTCCATGGCTTCCTTGTAAATGTAGTGATCAAATCTTTCA        
JMFF008C09+           TTCGGTAGCGTTCTCCATGGCTTCCTTGTAAATGTAGTGATCAAATCTTTCAGAG     
JMFF004M21+           TTCGGTAGCGTTCTCCATGGCTTCCTTGTAAATGTAGTGATCAAATCTTTCAGAG     
JMSF003P16+           TCCGGTAGCGTTCTCCATGGCTTCCTTGTAAATGTAGTGATCAAATCTTTCAGAG     
JMFF018C16+           TTCGGTAGCGTTCTCCATGGCTTCCTTGTAAATGTAGTGATCAAATCTTTCAGAG     
JMFF027G06+           TTCGGTAGCGTTCTCCATGGCTTCCTTGTAAATGTAGTGATCAAATCTTTCAGAGCAGAG
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consensus             TTCGGTAGCGTTCTCCATGGCTTCCTTGTAAATGTAGTGATCAAATCTTTCAGAGCAGAG