Contig 007393:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF026N23Sequence635007393 (3)emb|CDP08260.1|5e-34unnamed protein product [Coffea canephora]756012417 (3)ref|XP_011081683.1|1e-90PREDICTED: zinc transporter 4, chloroplastic-like [Sesamum indicum]
JMFF043D04Sequence666007393 (3)emb|CDP08260.1|5e-42unnamed protein product [Coffea canephora]605012417 (3)ref|XP_011081683.1|3e-91PREDICTED: zinc transporter 4, chloroplastic-like [Sesamum indicum]
JMSF009E15Sequence272007393 (3)751012417 (3)ref|XP_011081683.1|2e-108PREDICTED: zinc transporter 4, chloroplastic-like [Sesamum indicum]

Alignment

This contig is upended


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JMFF043D04+                                                                TAAATCC
                      ____________________________________________________________
consensus                                                                  TAAATCC
 
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JMFF043D04+           AGAGAATGGGAATTTCAACCAAGGATATTCAGGTAGACAGGGATTAGTCAGTTGCTCAGT
JMFF026N23+                                    TATTCAGGTAGACAGGGATTAGTCAGTTGCTCAGT
                      ____________________________________________________________
consensus             AGAGAATGGGAATTTCAACCAAGGATATTCAGGTAGACAGGGATTAGTCAGTTGCTCAGT
 
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JMFF043D04+           TGCATCAGGTAACATGTGAACAAAACCGGTGGCAAGGATGACACCAGCTGCAAAGGCTTT
JMFF026N23+           TGCATCAGGTAACATGTGAACAAAACCGGTGGCAAGGATGACACCAGCTGCAAAGGCTTT
                      ____________________________________________________________
consensus             TGCATCAGGTAACATGTGAACAAAACCGGTGGCAAGGATGACACCAGCTGCAAAGGCTTT
 
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JMFF043D04+           GGCAGCAACAAAGAGATTAGAATCTGTTTGAAGGAACCGTCGCTTCCTGCCAATTAATGG
JMFF026N23+           GGCAGCAACAAAGAGATTAGAATCTGTTTGAAGGAACCGTCGCTTCCTGCCAATTAATGG
                      ____________________________________________________________
consensus             GGCAGCAACAAAGAGATTAGAATCTGTTTGAAGGAACCGTCGCTTCCTGCCAATTAATGG
 
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JMFF043D04+           GACTGAAACTCCAAATGCACCAGCAATGAGAATAGCTGCAATAGCAATCATTTTAAGGAT
JMFF026N23+           GACTGAAACTCCAAATGCACCAGCAATGAGAATAGCTGCAATAGCAATCATTTTAAGGAT
                      ____________________________________________________________
consensus             GACTGAAACTCCAAATGCACCAGCAATGAGAATAGCTGCAATAGCAATCATTTTAAGGAT
 
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JMFF043D04+           GAAAGCAGATCCGCTGTCTTGGCAGTCCCCTAACTCTTTTTCAGAATTGCCACAGCTGTG
JMSF009E15+                                                 TTTCAGAATTGCCACAGCTGTG
JMFF026N23+           GAAAGCAGATCCGCTGTCTTGGCAGTCCCCTAACTCTTTTTCAGAATTGCCACAGCTGTG
                      ____________________________________________________________
consensus             GAAAGCAGATCCGCTGTCTTGGCAGTCCCCTAACTCTTTTTCAGAATTGCCACAGCTGTG
 
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JMFF043D04+           GTTAGACAAAGATTGAGAGACATTCTGCAAAAAGGAGTCTGTGAAGACCTTCGTCTTCGC
JMSF009E15+           GTTAGACAAAGATTGAGAGACATTCTGCAAAAAGGAGTCTGTGAAGACCTTCGTCTTCGC
JMFF026N23+           GTTAGACAAAGATTGAGAGACATTCTGCAAAAAGGAGTCTGTGAAGACCTTCGTCTTCGC
                      ____________________________________________________________
consensus             GTTAGACAAAGATTGAGAGACATTCTGCAAAAAGGAGTCTGTGAAGACCTTCGTCTTCGC
 
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JMFF043D04+           TCTAATTTGATCCATGCAAAACGGAAGAAGGCCCTCAACGAGTGACATGATTAGAGAAGA
JMSF009E15+           TCTAATTTGATCCATGCAAAACGGAAGAAGGCCCTCAACGAGTGACATGATTAGAGAAGA
JMFF026N23+           TCTAATTTGATCCATGCAAAACGGAAGAAGGCCCTCAACGAGTGACATGATTAGAGAAGA
                      ____________________________________________________________
consensus             TCTAATTTGATCCATGCAAAACGGAAGAAGGCCCTCAACGAGTGACATGATTAGAGAAGA
 
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JMFF043D04+           GAACAGAAAACTCTATTCTGTTGTTATATTTGCGGTGGCGAATCTCGATGCAGTGGAAAC
JMSF009E15+           GAACAGAAAACTCTATTCTGTTGTTATATTTGCGGTGGCGAATCTCGATGCAGTGGAAAC
JMFF026N23+           GAACAGAAAACTCTATTCTGTTGTTATATTTGCGGTGGCGAATCTCGATGCAGTGGAAAC
                      ____________________________________________________________
consensus             GAACAGAAAACTCTATTCTGTTGTTATATTTGCGGTGGCGAATCTCGATGCAGTGGAAAC
 
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JMFF043D04+           TCGGCCTGAGAGAGTGATAGCCGATAGGCAGATTATAGATTGAAGATTCTGGGTGGAGAG
JMSF009E15+           TCGGCCTGAGAGAGTGATAGCCGATAGGCAGATTATAGATTGAAGATTCTGGGTGGAGAG
JMFF026N23+           TCGGCCTGAGAGAGTGATAGCCGATAGGCAGATTATAGATTGAAGATTCTGGGTGGAGAG
                      ____________________________________________________________
consensus             TCGGCCTGAGAGAGTGATAGCCGATAGGCAGATTATAGATTGAAGATTCTGGGTGGAGAG
 
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JMFF043D04+           GGGCTTTTATGATTTATCGTGCGTAGCGGCGCACAGATTACCGGTAACGTATGGATATAG
JMSF009E15+           GGGCTTTT                                                    
JMFF026N23+           GGGCTTTTATGATTTATCGTGCGTAGCGGCGCACAGATTACCGGTAACGTATGGATATAG
                      ____________________________________________________________
consensus             GGGCTTTTATGATTTATCGTGCGTAGCGGCGCACAGATTACCGGTAACGTATGGATATAG
 
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JMFF043D04+           AGAGAGAGATGAGAGAGAAAGAGAGATGTCGACATTTTGATGAAGAAATGGTGTCAACT 
JMFF026N23+           AGAGAGAGATGAGAGAGAAAGAGAGATGTCGACATTTTGATGAAGAAATGGTGTCAACTT
                      ____________________________________________________________
consensus             AGAGAGAGATGAGAGAGAAAGAGAGATGTCGACATTTTGATGAAGAAATGGTGTCAACTT