Contig 007376:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF023F11-                                                           ACATATATTCT
                      ____________________________________________________________
consensus                                                              ACATATATTCT
 
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rJMFF050F19-                                         TTCAAATTCCAATTACTTGTGAGAGGACA
rJMFF023F11-          TTAAATAATAGATCATCCATCATCTCCTCTCTTCAAATTCCAATTACAAGTGAGAGGACA
rJMFF008J22-                                             AATTCCAATTACAAGTGAGAGGACA
                      ____________________________________________________________
consensus             TTAAATAATAGATCATCCATCATCTCCTCTCTTCAAATTCCAATTACAAGTGAGAGGACA
 
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rJMFF050F19-          GTTCAGAAATATAAAGTTCCCCACTCATATTGACTAAGGCAAATACCTGAACAATCCAAA
rJMFF023F11-          GTTCAGAAATATAAAGTTCACAACTCATATTGACTAAGGCAAATACCTAAACAATCCAAA
rJMFF008J22-          GTTCAGAAATATAAAGTTCACAACTCATATTGACTAAGGCAAATACCTAAACAATCCAAA
                      ____________________________________________________________
consensus             GTTCAGAAATATAAAGTTCACAACTCATATTGACTAAGGCAAATACCTAAACAATCCAAA
 
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rJMFF050F19-          GGGCAAAGATTTCTTTCCCCTTTCTGGCTACGTCTCTTTATTGTGCAGGACTGGGAACAT
rJMFF023F11-          GGGCAGAGATTTCTTTCCCCTTTCTGGCTACGTCTCTTTATTGTGCAGGACTCTTAACAT
rJMFF008J22-          GGGCAGAGATTTCTTTCCCCTTTCTGGCTACGTCTCTTTATTGTGCAGGACTCTTAACAT
                      ____________________________________________________________
consensus             GGGCAGAGATTTCTTTCCCCTTTCTGGCTACGTCTCTTTATTGTGCAGGACTCTTAACAT
 
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rJMFF050F19-          TCCCTGAATCCCTCTTGCCGCAGAAATATACACACGGCATGATTGATTCATTATAGAAAA
rJMFF023F11-          TCCCTGAATCCATCATGCCACAGAAATATACACACAGCATGATTGATTCATTAGAGAAAA
rJMFF008J22-          TCCCTGAATCCATCATGCCACAGAAATATACACACAGCATGATTGATTCATTAGAGAAAA
                      ____________________________________________________________
consensus             TCCCTGAATCCATCATGCCACAGAAATATACACACAGCATGATTGATTCATTAGAGAAAA
 
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rJMFF050F19-          ACAATGCTCATAACAAGACCCTCATTTTCAGACTTGTTGTCACTCTATATACAGAGATGA
rJMFF023F11-          ACAATGCTCATAACAAGACCCTCATTTTCAGACTTGTTGTCACACTATATACAGAGATAA
rJMFF008J22-          ACAATGCTCATAACAAGACCCTCATTTTCAGACTTGTTGTCACACTATATACAGAGATAA
                      ____________________________________________________________
consensus             ACAATGCTCATAACAAGACCCTCATTTTCAGACTTGTTGTCACACTATATACAGAGATAA
 
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rJMFF050F19-          ACAAATTGGATCACTTTTCTGGACGGTTTGCCCCTCGACCAAAAATCTCTATTTCCTGAT
rJMFF023F11-          ACAAATTGGTTTAGTTTTCAGGTCGGTTTGCCCCTCGACCAAAAATCTCTATTTCCTGAT
rJMFF008J22-          ACAAATTGGTTTAGTTTTCAGGTCGGTTTGCCCCTCGACCAAAAATCTCTATTTCCTGAT
                      ____________________________________________________________
consensus             ACAAATTGGTTTAGTTTTCAGGTCGGTTTGCCCCTCGACCAAAAATCTCTATTTCCTGAT
 
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rJMFF050F19-          GTGGTTTTAATCGACATTTCAGCGCCTTCAGGGGACAATTGCAACTCAAGATTAGTTCTA
rJMFF023F11-          GTGGTTTTAATCTACATTTCAGCGTCTTCAGGGGCCATTGCAAACTCAAGATTAGTTCTA
rJMFF008J22-          GTGGTTTTAATCTACATTTCAGCGTCTTCAGGGGCCATTGCAAACTCAAGATTAGTTCTA
JMFF050F19+                                                                     TA
                      ____________________________________________________________
consensus             GTGGTTTTAATCTACATTTCAGCGTCTTCAGGGGCCATTGCAAACTCAAGATTAGTTCTA
 
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rJMFF050F19-          AGACACACCTGAAATGCTGTAATTGTTGCGGCAGATAAACCCTTCAATTCGCACCAGAGC
rJMFF023F11-          GGAGACAGCTGAGATGCTGTAATTTTGGCGGCAGTTAAACCCTTCAATTCGCACCTGAGC
rJMFF008J22-          GGAGACAGCTGAGATGCTGTAATTTTTGCGGCAGTTAAACCCTTCAATTCGCACCTGAGC
JMFF050F19+           GGAGACAGCTGAGATGCTGT-ATTTTTGCGGCAGTTAAACCTTTCAATTCGCACCTGAGC
                      ____________________________________________________________
consensus             GGAGACAGCTGAGATGCTGTAATTTTTGCGGCAGTTAAACCCTTCAATTCGCACCTGAGC
 
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rJMFF050F19-          TGGC                                                        
rJMFF023F11-          TGGCTTTTGCCCATACCTCATTCCGCATCCTCCTCCATTCATGCGAGTAGGGGAAGGAGT
rJMFF008J22-          TGGCTTTTGCCCATACCTCATTCCGCATCCTCCTCCATTCATGCGAGTAGGGGAAGGAGT
JMFF050F19+           TGGCTTTTGCCCATACCTCATTCCGCATCCTCCTCCATTCATGCGAGTAGGGGAAGGAGT
JMFF034M07+                                           CTCCATTCATGCGAGTAGGGGAAGGAGT
                      ____________________________________________________________
consensus             TGGCTTTTGCCCATACCTCATTCCGCATCCTCCTCCATTCATGCGAGTAGGGGAAGGAGT
 
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rJMFF023F11-          CAGAGGTGGTGATGGCAATGGCAGCACTACTGTTCGAAGCGGTGATGGGATTGCAACAAA
rJMFF008J22-          CAGAGGTGGTGATGGCAATGGCAGCACTACTGTTCGAAGCGGTGATGGGATTGCAACAAA
JMFF050F19+           CAGAGGTGGTGATGGCAATGGCAGCACTACTGTTCGAAGCGGTGATGGGATTGCAACAAA
JMFF034M07+           CAGAGGTGGTGATGGCAATGGCAGCACTACTGTTCGAAGCGGTGATGGGATTGCAACAAA
JMFF023F11+                                                  CGGTGATGGGATTGCAACAAA
                      ____________________________________________________________
consensus             CAGAGGTGGTGATGGCAATGGCAGCACTACTGTTCGAAGCGGTGATGGGATTGCAACAAA
 
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rJMFF023F11-          ATCATCATGCCCAAAATGTAAATCTTGAATCAGGGGATTCATAGCCCTGCTTGGTGGCGA
rJMFF008J22-          ATCATCATGCCCAAAATGTAAATCTTGAATCAGGGGATTCATAGCCCTGCTTGGTGGCGA
JMFF050F19+           ATCATCATGCCCAAAATGTAAATCTTGAATCAGGGGATTCATAGCCCTGCTTGGTGGCGA
JMFF034M07+           ATCATCATGCCCAAAATGTAAATCTTGAATCAGGGGATTCATAGCCCTGCTTGGTGGCGA
JMFF023F11+           ATCATCATGCCCAAAATGTAAATCTTGAATCAGGGGATTCATAGCCCTGCTTGGTGGCGA
                      ____________________________________________________________
consensus             ATCATCATGCCCAAAATGTAAATCTTGAATCAGGGGATTCATAGCCCTGCTTGGTGGCGA
 
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rJMFF023F11-          CCCACTGAAAAAAGGTGGCGATGAAGCCATCTGCAAATTGGGGGTTCCANCATGACAGC 
rJMFF008J22-          CCCACTGAAAAAAGGTGGCGATGAAGCCATCTGCAAATTGGGGGTTCCAACATGACAGCT
JMFF050F19+           CCCACTGAAAAAAGGTGGCGATGAAGCCATCTGCAAATTGGGGGTTCCAACATGACAGCT
JMFF034M07+           CCCACTGAAAAAAGGTGGCGATGAAGCCATCTGCAAATTGGGGGTTCCAACATGACAGCT
JMFF023F11+           CCCACTGAAAAAAGGTGGCGATGAAGCCATCTGCAAATTGGGGGTTCCAACATGACAGCT
                      ____________________________________________________________
consensus             CCCACTGAAAAAAGGTGGCGATGAAGCCATCTGCAAATTGGGGGTTCCAACATGACAGCT
 
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rJMFF008J22-          CCCCTTACTAAGGATGAGTTCCAAAAGCTCAATTCCAGCTTCCG                
JMFF050F19+           CCCCTTACTAAGGATGAGTTCCAAAAGCTCAATTCCAGCTTCCGAATCACAAGGCTCCGT
JMFF034M07+           CCCCTTACTAAGGATGAGTTCCAAAAGCTCAATTCCAGCTTCCGAATCACAAGGCTCCGT
JMFF023F11+           CCCCTTACTAAGGATGAGTTCCAAAAGCTCAATTCCAGCTTCCGAATCACAAGGCTCCGT
                      ____________________________________________________________
consensus             CCCCTTACTAAGGATGAGTTCCAAAAGCTCAATTCCAGCTTCCGAATCACAAGGCTCCGT
 
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JMFF050F19+           CTGTTGACTG                                                  
JMFF034M07+           CTGTTGACTG                                                  
JMFF023F11+           CTGTTGACTGCCAATAACACCCCAAAAAGTTTTAGAAAAACAAAATACACAAATTCCATA
                      ____________________________________________________________
consensus             CTGTTGACTGCCAATAACACCCCAAAAAGTTTTAGAAAAACAAAATACACAAATTCCATA
 
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JMFF023F11+           GTGGAAAGAGGTATAACCTGATTTAATTTCATAGAGACGAGTTTACAGTGGGAAAACAAA
                      ____________________________________________________________
consensus             GTGGAAAGAGGTATAACCTGATTTAATTTCATAGAGACGAGTTTACAGTGGGAAAACAAA
 
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JMFF023F11+           ACCTGAACCGCGGCAAGCAAGAAGGCCTGGTGAGTTCATCGACGAGGCCACCAACTCTAC
                      ____________________________________________________________
consensus             ACCTGAACCGCGGCAAGCAAGAAGGCCTGGTGAGTTCATCGACGAGGCCACCAACTCTAC
 
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JMFF023F11+           GCGGCTTTGGGCAAGCGATGCTGTTGCTCATCGTCATCATCATCCAATTTTCTCTATCCC
                      ____________________________________________________________
consensus             GCGGCTTTGGGCAAGCGATGCTGTTGCTCATCGTCATCATCATCCAATTTTCTCTATCCC
 
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JMFF023F11+           CCTCCATCTCGCCCTATGTCTTCACAGATCCGACGCCTGCAACAACACGAAACCTATTTC
                      ____________________________________________________________
consensus             CCTCCATCTCGCCCTATGTCTTCACAGATCCGACGCCTGCAACAACACGAAACCTATTTC
 
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JMFF023F11+           AGATATACGCAACATAACGTATGCATATACGTACCGGTATACAAAACGTATTTGGTAAAC
                      ____________________________________________________________
consensus             AGATATACGCAACATAACGTATGCATATACGTACCGGTATACAAAACGTATTTGGTAAAC