Contig 007373:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF022N14Sequence555007373 (2)ref|XP_009790185.1|109PREDICTED: uncharacterized protein LOC104237691 [Nicotiana sylvestris]592002587 (2)ref|XP_009790185.1|99.4PREDICTED: uncharacterized protein LOC104237691 [Nicotiana sylvestris]
JMSF024G06Sequence670007373 (2)ref|XP_009790185.1|147PREDICTED: uncharacterized protein LOC104237691 [Nicotiana sylvestris]737002587 (2)ref|XP_009790185.1|160PREDICTED: uncharacterized protein LOC104237691 [Nicotiana sylvestris]

Alignment

This contig is upended


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JMSF024G06+                                                           ATTTCGGAATTC
                      ____________________________________________________________
consensus                                                             ATTTCGGAATTC
 
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JMSF024G06+           CCACCCAGATTCATATACTCAGATAAGCAACCCATCGACTTAGGCATAGGCGAAAACAAA
                      ____________________________________________________________
consensus             CCACCCAGATTCATATACTCAGATAAGCAACCCATCGACTTAGGCATAGGCGAAAACAAA
 
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JMSF024G06+           AGCACCAAATTCGAAGAAATTTTCGGGAACTCGACACTAGCCTTACCCGGGAGATTGTCG
JMFF022N14+                                                        CCCGGGAGATTGTCG
                      ____________________________________________________________
consensus             AGCACCAAATTCGAAGAAATTTTCGGGAACTCGACACTAGCCTTACCCGGGAGATTGTCG
 
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JMSF024G06+           ATTTCAGATTCCAAAGCATAATCGCAGACGAGCTGGTGCAGAGAGCTCGCGACATAAGAG
JMFF022N14+           ATTTCAGATTCCAAAGCATAATCGCAGACGAGCTGGTGCAGAGAGCTCGCGACATAAGAG
                      ____________________________________________________________
consensus             ATTTCAGATTCCAAAGCATAATCGCAGACGAGCTGGTGCAGAGAGCTCGCGACATAAGAG
 
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JMSF024G06+           GCGCGAGGCGGATCTACCTCAAATTCCACCGGAATTGACAGAGATGTGAGCAAATCAGTA
JMFF022N14+           GCGCGAGGCGGATCTACCTCAAATTCCACCGGAATTGACAGAGATGTGAGCAAATCAGTA
                      ____________________________________________________________
consensus             GCGCGAGGCGGATCTACCTCAAATTCCACCGGAATTGACAGAGATGTGAGCAAATCAGTA
 
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JMSF024G06+           AGGGAATTTAGGGTTTGGGAAGGGTGGCTGAAAGAGAGAGGAGCGGCGGATGCGTTACCA
JMFF022N14+           AGGGAATTTAGGGTTTGGGAAGGGTGGCTGAAAGAGAGAGGAGCGGCGGATGCGTTACCA
                      ____________________________________________________________
consensus             AGGGAATTTAGGGTTTGGGAAGGGTGGCTGAAAGAGAGAGGAGCGGCGGATGCGTTACCA
 
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JMSF024G06+           GCGAGACGACCGACGGCGGAGGCGGAGAGGAGAGGGGAGAGAGAGGAGAAGAAGAATTTG
JMFF022N14+           GCGAGACGACCGACGGCGGAGGCGGAGAGGAGAGGGGAGAGAGAGGAGAAGAAGAATTTG
                      ____________________________________________________________
consensus             GCGAGACGACCGACGGCGGAGGCGGAGAGGAGAGGGGAGAGAGAGGAGAAGAAGAATTTG
 
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JMSF024G06+           AAGGAGAAGAGGGATTGAGAAAGCGGAGCAAAGGTCAGGAGGCGCTTGGCGGCTGCGGAG
JMFF022N14+           AAGGAGAAGAGGGATTGAGAAAGCGGAGCAAAGGTCAGGAGGCGCTTGGCGGCTGCGGAG
                      ____________________________________________________________
consensus             AAGGAGAAGAGGGATTGAGAAAGCGGAGCAAAGGTCAGGAGGCGCTTGGCGGCTGCGGAG
 
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JMSF024G06+           ACTGAAGTGAGGTAAGAGATAGGGTTGTGGAAAGCTTGTAGCGGATGAAGATCTATGAGG
JMFF022N14+           ACTGAAGTGAGGTAAGAGATAGGGTTGTGGAAAGCTTGTAGCGGATGAAGATCTATGAGG
                      ____________________________________________________________
consensus             ACTGAAGTGAGGTAAGAGATAGGGTTGTGGAAAGCTTGTAGCGGATGAAGATCTATGAGG
 
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JMSF024G06+           AGGACTATGCGCTGGGTCTTCGAGTAGTCAAACGGCTCCGCCATTGCAGCGGCGGAGAGC
JMFF022N14+           AGGACTATGCGCTGGGTCTTCGAGTAGTCAAACGGCTCCGCCATTGCAGCGGCGGAGAGC
                      ____________________________________________________________
consensus             AGGACTATGCGCTGGGTCTTCGAGTAGTCAAACGGCTCCGCCATTGCAGCGGCGGAGAGC
 
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JMSF024G06+           TAATTGAGCCTCGAATTCTCACGGCACCAAAAATGGCGTCGGCCGGCAGCACGCGCCTAA
JMFF022N14+           TAATTGAGCCTCGAATTCTCACGGCACCAAAAATGGCGTCGGCCGGCAGCACGCGCCTAA
                      ____________________________________________________________
consensus             TAATTGAGCCTCGAATTCTCACGGCACCAAAAATGGCGTCGGCCGGCAGCACGCGCCTAA
 
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JMSF024G06+           GATTCCAGAAGGGACTGTCTCGGCGGCAAAACTGAATGAGCGGTAAAATTTTCGTTT   
JMFF022N14+           GATTCCAGAAGGGACTGTCTCGGCGGCAAAACTGAATGAGCGGTAAAATTTTCGTTTTTC
                      ____________________________________________________________
consensus             GATTCCAGAAGGGACTGTCTCGGCGGCAAAACTGAATGAGCGGTAAAATTTTCGTTTTTC