Contig 007371:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF022M09Sequence588007371 (2)ref|XP_006339083.1|228PREDICTED: uncharacterized protein LOC102586530 [Solanum tuberosum]718007371 (2)ref|XP_006339083.1|338PREDICTED: uncharacterized protein LOC102586530 [Solanum tuberosum]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF022M09-                            TTGATGAGTGTAAGAGTTAACCAGTTAGTTCAATTTTGTACA
                      ____________________________________________________________
consensus                               TTGATGAGTGTAAGAGTTAACCAGTTAGTTCAATTTTGTACA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF022M09-          TAGTAGCACAAGAATACTATACACAATATGCACAGGAATCTTAGTTAAATCATTTACAGG
                      ____________________________________________________________
consensus             TAGTAGCACAAGAATACTATACACAATATGCACAGGAATCTTAGTTAAATCATTTACAGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF022M09-          AAATCCCATCGCCAATAGACCTTCTCCACAATGCCTCCACCACTTCGAACAGCAAGATGG
                      ____________________________________________________________
consensus             AAATCCCATCGCCAATAGACCTTCTCCACAATGCCTCCACCACTTCGAACAGCAAGATGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF022M09-          AGTGTTTCAGATGCAGGCGGGATCCCCCAGAGAAGAGGAACTGAAACTGTCATGGTTAGC
                      ____________________________________________________________
consensus             AGTGTTTCAGATGCAGGCGGGATCCCCCAGAGAAGAGGAACTGAAACTGTCATGGTTAGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF022M09-          TTTTCATGCATGCCGCCTTTGCTTGCTTTTTCTGCAGAGACAACCTCACCACCGTGTTCC
                      ____________________________________________________________
consensus             TTTTCATGCATGCCGCCTTTGCTTGCTTTTTCTGCAGAGACAACCTCACCACCGTGTTCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF022M09-          ACTACAATATCTTCCACAACATCACTCAACATCTCAACAGAACGGCAAAATCCCAGAATA
JMFF022M09+                       TCCACAACATCACTCAACATCTCAACAGAACGGCAAAATCCCAGAATA
                      ____________________________________________________________
consensus             ACTACAATATCTTCCACAACATCACTCAACATCTCAACAGAACGGCAAAATCCCAGAATA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF022M09-          CATAGCTTTCTACCCATGTCAAGACCATTTGTTGCTGCAATATCAAAAAGTGCACCCAAA
JMFF022M09+           CATAGCTTTCTACCCATGTCAAGACCATTTGTTGCTGCAATATCAAAAAGTGCACCCAAA
                      ____________________________________________________________
consensus             CATAGCTTTCTACCCATGTCAAGACCATTTGTTGCTGCAATATCAAAAAGTGCACCCAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF022M09-          CATAGGCCTTGAGCTGGATCCATGTAATCACTCTCTTGGTACCGTTGTAATCTTGGAGAC
JMFF022M09+           CATAGGCCTTGAGCTGGATCCATGTAATCACTCTCTTGGTACCGTTGTAATCTTGGAGAC
                      ____________________________________________________________
consensus             CATAGGCCTTGAGCTGGATCCATGTAATCACTCTCTTGGTACCGTTGTAATCTTGGAGAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF022M09-          ATTTTTACTTTTCCTTGCTTCTTATCAGAGGAAGAGACACCTTGTGGAACCAAATTCCCT
JMFF022M09+           ATTTTTACTTTTCCTTGCTTCTTATCAGAGGAAGAGACACCTTGTGGAACCAAATTCCCT
                      ____________________________________________________________
consensus             ATTTTTACTTTTCCTTGCTTCTTATCAGAGGAAGAGACACCTTGTGGAACCAAATTCCCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF022M09-          CCAATTTGTATCAACCCATCAGCAGTGAACAGGGTGATTTTGTCCTCTTGTACCCACTGC
JMFF022M09+           CCAATTTGTATCAACCCATCAGCAGTGAACAGGGTGATTTTGTCCTCTTGTACCCACTGC
                      ____________________________________________________________
consensus             CCAATTTGTATCAACCCATCAGCAGTGAACAGGGTGATTTTGTCCTCTTGTACCCACTGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF022M09-          ACAGAGGAGTCGGAAGGATCAGAGGGTTCCCAAGGATAGTTCCCGAATGCATCGTCGCCG
JMFF022M09+           ACAGAGGAGTCGGAAGGATCAGAGGGTTCCCAAGGATAGTTCCCGAATGCATCGTCGCCG
                      ____________________________________________________________
consensus             ACAGAGGAGTCGGAAGGATCAGAGGGTTCCCAAGGATAGTTCCCGAATGCATCGTCGCCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF022M09-          AGGAAATGGCTGGAACCGGAAGCCTTAGCGGCGGTGAATCGGACCGAACGGGTCGGCGGT
JMFF022M09+           AGGAAATGGCTGGAACCGGAAGCCTTAGCGGCGGTGAATCGGACCGAACGGGTCGGCGGT
                      ____________________________________________________________
consensus             AGGAAATGGCTGGAACCGGAAGCCTTAGCGGCGGTGAATCGGACCGAACGGGTCGGCGGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF022M09-          TGACCCGGGCATTTTA                                            
JMFF022M09+           TGACCCGGGCATTTTAGGAGCGGGAGAAAAGAAAAGGAAGCGAATGAAGAAGAGGGTATG
                      ____________________________________________________________
consensus             TGACCCGGGCATTTTAGGAGCGGGAGAAAAGAAAAGGAAGCGAATGAAGAAGAGGGTATG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF022M09+           AGTTCTTTAGAGGGCAGGATTGAAGAGAAGGTGGAGAAACATAGAGCAGAGGTATCAGGC
                      ____________________________________________________________
consensus             AGTTCTTTAGAGGGCAGGATTGAAGAGAAGGTGGAGAAACATAGAGCAGAGGTATCAGGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF022M09+           ATTGTTGTTTGTGGATAGACGATGGAATATTGAGGGATTCCTTCCGGGAGAGAAGAAACC
                      ____________________________________________________________
consensus             ATTGTTGTTTGTGGATAGACGATGGAATATTGAGGGATTCCTTCCGGGAGAGAAGAAACC