Contig 007370:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF022J15Sequence504007370 (2)ref|XP_009789508.1|144PREDICTED: uncharacterized protein LOC104237121 [Nicotiana sylvestris]746006892 (2)ref|XP_009789508.1|332PREDICTED: uncharacterized protein LOC104237121 [Nicotiana sylvestris]
JMFF032L20Sequence510007370 (2)ref|XP_009789508.1|157PREDICTED: uncharacterized protein LOC104237121 [Nicotiana sylvestris]728006892 (2)ref|XP_009789508.1|317PREDICTED: uncharacterized protein LOC104237121 [Nicotiana sylvestris]

Alignment

This contig is upended


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JMFF032L20+                                         TTCTTGACGCCATAGTCGCCTTTGATGGCT
JMFF022J15+                                               ACGCCATAGTCGCCTTTGATGGCT
                      ____________________________________________________________
consensus                                           TTCTTGACGCCATAGTCGCCTTTGATGGCT
 
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JMFF032L20+           TTGCTAATGAAGTGCAGTGCCTTGGTATCAAATGGCAACTTGTGATGAATATTATCTGTC
JMFF022J15+           TTGCTAATGAAGTGCAGTGCCTTGGTATCAAATGGCAACTTGTGATGAATATTATCTGTC
                      ____________________________________________________________
consensus             TTGCTAATGAAGTGCAGTGCCTTGGTATCAAATGGCAACTTGTGATGAATATTATCTGTC
 
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JMFF032L20+           AACCCTTTGGTCTCTTCTTTGGCCTTGGCATCAGCTTCCATTTTGGCAAGCTCCTTCTCC
JMFF022J15+           AACCCTTTGGTCTCTTCTTTGGCCTTGGCATCAGCTTCCATTTTGGCAAGCTCCTTCTCC
                      ____________________________________________________________
consensus             AACCCTTTGGTCTCTTCTTTGGCCTTGGCATCAGCTTCCATTTTGGCAAGCTCCTTCTCC
 
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JMFF032L20+           TGGTTCACGTCTGCTTGGAGCTGGGTGATTTGGGTTTCTAGCCGAGTTATCTCGCTTTCC
JMFF022J15+           TGGTTCACGTCTGCTTGGAGCTGGGTGATTTGGGTTTCTAGCCGAGTTATCTCGCTTTCC
                      ____________________________________________________________
consensus             TGGTTCACGTCTGCTTGGAGCTGGGTGATTTGGGTTTCTAGCCGAGTTATCTCGCTTTCC
 
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JMFF032L20+           ACCATGGCCAACTCGCCCAAAAGCTCCTTCATTTTTGGAGGAAGAAAATTTGGGATGCTG
JMFF022J15+           ACCATGGCCAACTCGCCCAAAAGCTCCTTCATTTTTGGAGGAAGAAAATTTGGGATGCTG
                      ____________________________________________________________
consensus             ACCATGGCCAACTCGCCCAAAAGCTCCTTCATTTTTGGAGGAAGAAAATTTGGGATGCTG
 
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JMFF032L20+           AGAGCTGAAGCATTCTTCCGCTGGTAAACACCATCCAGAAATTCTCGCACCTTTTGTTCA
JMFF022J15+           AGAGCTGAAGCATTCTTCCGCTGGTAAACACCATCCAGAAATTCTCGCACCTTTTGTTCA
                      ____________________________________________________________
consensus             AGAGCTGAAGCATTCTTCCGCTGGTAAACACCATCCAGAAATTCTCGCACCTTTTGTTCA
 
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JMFF032L20+           TGTTCCAGCATTTTACTCAGCTCAGAAACCTCTCTTTGGAGTTCCTCCCTCTTTTGGTGT
JMFF022J15+           TGTTCCAGCATTTTACTCAGCTCAGAAACCTCTCTTTGGAGTTCCTCCCTCTTTTGGTGT
                      ____________________________________________________________
consensus             TGTTCCAGCATTTTACTCAGCTCAGAAACCTCTCTTTGGAGTTCCTCCCTCTTTTGGTGT
 
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JMFF032L20+           CCAATGATCTTCTTCTTTCTAATATGCGTCGGGGTGTGAACGGCGGCTAGGTCTGCCATG
JMFF022J15+           CCAATGATCTTCTTCTTTCCAATATGCGTCGGGGTGTGAACGGCGGCTAGGTCTGCCATG
                      ____________________________________________________________
consensus             CCAATGATCTTCTTCTTTCTAATATGCGTCGGGGTGTGAACGGCGGCTAGGTCTGCCATG
 
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JMFF032L20+           AAGGCCGGCCGGGAAAGTAAAAACAGCACCTTAGCGGCCGGAGATTCAAGAAACTTT   
JMFF022J15+           AAGGCCGGCCGGGAAAGTAAAAACAGCACCTTAGCGGCCGGAGATTCAAGAAACTTTACT
                      ____________________________________________________________
consensus             AAGGCCGGCCGGGAAAGTAAAAACAGCACCTTAGCGGCCGGAGATTCAAGAAACTTTACT