Contig 007368:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF022E21Sequence523007368 (2)ref|XP_004234493.1|115PREDICTED: uncharacterized protein LOC101258531 [Solanum lycopersicum]713007368 (2)ref|XP_009761617.1|3e-26PREDICTED: putative protein TPRXL [Nicotiana sylvestris]

Alignment

This contig is upended


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rJMFF022E21-                                                                   ATA
                      ____________________________________________________________
consensus                                                                      ATA
 
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rJMFF022E21-          ATAGTAACAAACATAATGACATCATATAGGATAATAGCTTACCCATAGTTCATCATATAA
                      ____________________________________________________________
consensus             ATAGTAACAAACATAATGACATCATATAGGATAATAGCTTACCCATAGTTCATCATATAA
 
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rJMFF022E21-          TAACTGCTTGTGTTTGTGTAACAAAAAGAAAAAAATTACCAACTTTTCTTGTCACTCAAA
                      ____________________________________________________________
consensus             TAACTGCTTGTGTTTGTGTAACAAAAAGAAAAAAATTACCAACTTTTCTTGTCACTCAAA
 
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rJMFF022E21-          AATAAAGATACATATAGACAAAGTCAGAATTGATTGATCAAAAGATCAACCCATTGGCAG
                      ____________________________________________________________
consensus             AATAAAGATACATATAGACAAAGTCAGAATTGATTGATCAAAAGATCAACCCATTGGCAG
 
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rJMFF022E21-          TCCCAAAATCAAGAATACTAGTGGCAAGGGTTACAAATTTTTCTGATCATATTTCATCAA
                      ____________________________________________________________
consensus             TCCCAAAATCAAGAATACTAGTGGCAAGGGTTACAAATTTTTCTGATCATATTTCATCAA
 
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rJMFF022E21-          AAGTGAACATGTCAGCTAGGTTTCCAGAATTCTGAGAACAGTACAGAACTCTCATACAAA
                      ____________________________________________________________
consensus             AAGTGAACATGTCAGCTAGGTTTCCAGAATTCTGAGAACAGTACAGAACTCTCATACAAA
 
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rJMFF022E21-          CAGCAATGGAAAACTGGGAATTTAGTTTTCAAGCTAGCAAAGGGGTTTGATTGGCAAAGT
                      ____________________________________________________________
consensus             CAGCAATGGAAAACTGGGAATTTAGTTTTCAAGCTAGCAAAGGGGTTTGATTGGCAAAGT
 
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rJMFF022E21-          TGGATGTGCTAGCAGATCTGTGAGGGGGAACAGTGGGGGGTCTGTTTCCAAGAAAGCTGC
                      ____________________________________________________________
consensus             TGGATGTGCTAGCAGATCTGTGAGGGGGAACAGTGGGGGGTCTGTTTCCAAGAAAGCTGC
 
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rJMFF022E21-          CATTATTTCTCCTTGAGCTTAGAGATGAACATGACCCTCTGCTAGAAGACTTCTTCAAGT
                      ____________________________________________________________
consensus             CATTATTTCTCCTTGAGCTTAGAGATGAACATGACCCTCTGCTAGAAGACTTCTTCAAGT
 
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rJMFF022E21-          GTCCCAGCCTTGAAGAACTGCTGCTTCTTTGAGGAGGCTGATTATTATGGCTGCTGTTTT
                      ____________________________________________________________
consensus             GTCCCAGCCTTGAAGAACTGCTGCTTCTTTGAGGAGGCTGATTATTATGGCTGCTGTTTT
 
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rJMFF022E21-          TGCACCCTTCTAGAAACAATCCTCCATAGCTCCTGCATGATTTGAGCTTCTTGTTGTATG
JMFF022E21+                            AATCCTCCATAGCTCCTGCATGATTTGAGCTTCTTGTTGTATG
                      ____________________________________________________________
consensus             TGCACCCTTCTAGAAACAATCCTCCATAGCTCCTGCATGATTTGAGCTTCTTGTTGTATG
 
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rJMFF022E21-          GGTTTTCTGGCTTGGCAAGATCTTCTAAACTCCTCACATTTGATAGTGATGTGAATGATT
JMFF022E21+           GGTTTTCTGGCTTGGCAAGATCTTCTAAACTCCTCACATTTGATAGTGATGTGAATGATT
                      ____________________________________________________________
consensus             GGTTTTCTGGCTTGGCAAGATCTTCTAAACTCCTCACATTTGATAGTGATGTGAATGATT
 
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rJMFF022E21-          GTGACTTCCCATTGTAATGCCTTGACAACCCCCTCTTGAANGGCAGTTCT          
JMFF022E21+           GTGACTTCCCATTGTAATGCCTTGACAACCCCCTCTTGAAGGGCAGTTCTTGGAGGAGGG
                      ____________________________________________________________
consensus             GTGACTTCCCATTGTAATGCCTTGACAACCCCCTCTTGAAGGGCAGTTCTTGGAGGAGGG
 
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JMFF022E21+           TTGACATGTCTTGCAAGGGTTCATCACCATGGCTAGAACCAGAAGATGGAGACAGGCTAT
                      ____________________________________________________________
consensus             TTGACATGTCTTGCAAGGGTTCATCACCATGGCTAGAACCAGAAGATGGAGACAGGCTAT
 
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JMFF022E21+           CTTCTTCTTCTTCTTGTTCTTCCTCTTCTTCTTCATCACCAAATAAATCTGAGTCAGAGG
                      ____________________________________________________________
consensus             CTTCTTCTTCTTCTTGTTCTTCCTCTTCTTCTTCATCACCAAATAAATCTGAGTCAGAGG
 
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JMFF022E21+           AAAGATCATCACTGCACACATCAGAGGAAGAAGGAGACAGTGATGATGGATCTTGAAGAT
                      ____________________________________________________________
consensus             AAAGATCATCACTGCACACATCAGAGGAAGAAGGAGACAGTGATGATGGATCTTGAAGAT
 
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JMFF022E21+           GGGTTTGATCCTCATCCATGATTATCAGCTTCATCATATCAGAACTGAAATCCAAAAACA
                      ____________________________________________________________
consensus             GGGTTTGATCCTCATCCATGATTATCAGCTTCATCATATCAGAACTGAAATCCAAAAACA
 
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JMFF022E21+           CCCAAATCTGCAATCTTGTGCACTAAGAATATATCTGAGAAATAAAGACCAAATCTTTGG
                      ____________________________________________________________
consensus             CCCAAATCTGCAATCTTGTGCACTAAGAATATATCTGAGAAATAAAGACCAAATCTTTGG
 
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JMFF022E21+           CCTGTGGAAGCTGGAAAGGTTGGAGAAAAGATGGGATTATTAAAAATGGGAGTGGGGAAC
                      ____________________________________________________________
consensus             CCTGTGGAAGCTGGAAAGGTTGGAGAAAAGATGGGATTATTAAAAATGGGAGTGGGGAAC