Contig 007354:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF019K18Sequence576007354 (8)ref|XP_009760868.1|2e-43PREDICTED: probable polyamine transporter At1g31830 [Nicotiana sylvestris]807014103 (10)ref|XP_004144401.1|6e-94PREDICTED: probable polyamine transporter At1g31830-like [Cucumis sativus] ref|
JMFF027K12Sequence466007354 (8)ref|XP_009760868.1|3e-25PREDICTED: probable polyamine transporter At1g31830 [Nicotiana sylvestris]584014103 (10)ref|XP_009621514.1|1e-50PREDICTED: probable polyamine transporter At1g31830 isoform X2 [Nicotiana tomen
JMFF042M02Sequence659007354 (8)ref|XP_009760868.1|2e-72PREDICTED: probable polyamine transporter At1g31830 [Nicotiana sylvestris]586014103 (10)ref|XP_009621513.1|4e-42PREDICTED: probable polyamine transporter At1g31830 isoform X1 [Nicotiana tomen
JMFF044M24Sequence642007354 (8)ref|XP_009760868.1|1e-66PREDICTED: probable polyamine transporter At1g31830 [Nicotiana sylvestris]559014103 (10)ref|XP_009621513.1|3e-34PREDICTED: probable polyamine transporter At1g31830 isoform X1 [Nicotiana tomen
JMSF011B10Sequence218007354 (8)730014103 (10)ref|XP_008460421.1|2e-99PREDICTED: probable polyamine transporter At1g31830 isoform X6 [Cucumis melo] r
JMSF024K02Sequence659007354 (8)ref|XP_009760868.1|2e-72PREDICTED: probable polyamine transporter At1g31830 [Nicotiana sylvestris]710014103 (10)ref|XP_009766611.1|1e-91PREDICTED: probable polyamine transporter At1g31830 isoform X3 [Nicotiana sylve
JMSF037O17Sequence536007354 (8)ref|XP_009760868.1|6e-40PREDICTED: probable polyamine transporter At1g31830 [Nicotiana sylvestris]201014103 (10)
JMSF038I22Sequence660007354 (8)ref|XP_009760868.1|5e-72PREDICTED: probable polyamine transporter At1g31830 [Nicotiana sylvestris]800014103 (10)ref|XP_004144401.1|2e-102PREDICTED: probable polyamine transporter At1g31830-like [Cucumis sativus] ref|

Alignment

This contig is upended


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JMFF042M02+                                         AGGAATAGAACAGGATAGAGCGCATTATCA
JMSF024K02+                                         AGGAATAGAACAGGATAGAGCGCATTATCA
JMFF044M24+                                                           AGCGCATTATCA
JMSF038I22+                                         AGGAATAGAACAGGATAGAGCGCATTATCA
                      ____________________________________________________________
consensus                                           AGGAATAGAACAGGATAGAGCGCATTATCA
 
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JMFF042M02+           ATCACCCCACTTAGCCATTTCATCCAACCTTGCTGAAACCCCCAATACGGGCCCAGAGCC
JMSF024K02+           ATCACCCCACTTAGCCATTTCATCCAACCTTGCTGAAACCCCCAATACGGGCCCAGAGCC
JMFF044M24+           ATCACCCCACTTAGCCATNTCATCCAACCTTGCTGAAACCCCCAATACGGGCCCAGAGCC
JMSF038I22+           ATCACCCCACTTAGCCATTTCATCCAACCTTGCTGAAACCCCCAATACGGGCCCAGAGCC
                      ____________________________________________________________
consensus             ATCACCCCACTTAGCCATTTCATCCAACCTTGCTGAAACCCCCAATACGGGCCCAGAGCC
 
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JMFF042M02+           GAAGAAACCCAAACCACATAACCACCGTTTTCCGGAAACATCGTACCCATCTCAGCAGTT
JMSF024K02+           GAAGAAACCCAAACCACATAACCACCGTTTTCCGGAAACATCGTACCCATCTCAGCAGTT
JMFF044M24+           GAAGAAACCCAAACCACATAACCACCGTTTTCCGGAAACATCGTACCCATCTCAGCAGTT
JMSF037O17+                                             GAAACATCGTACCCATCTCAGCAGTT
JMSF038I22+           GAAGAAACCCAAACCACATAACCACCGTTTTCCGGAAACATCGTACCCATCTCAGCAGTT
JMFF019K18+                                   CCGTTTTCCGGAAACATCGTACCCATCTCAGCAGTT
                      ____________________________________________________________
consensus             GAAGAAACCCAAACCACATAACCACCGTTTTCCGGAAACATCGTACCCATCTCAGCAGTT
 
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JMFF042M02+           ATCAGCGCCTCGGGAACACTCCATATAAACGGGAACACCAAGAATCCAACAAGAGCAAGA
JMSF024K02+           ATCAGCGCCTCGGGAACACTCCATATAAACGGGAACACCAAGAATCCAACAAGAGCAAGA
JMFF044M24+           ATCAGCGCCTCGGGAACACTCCATATAAACGGGAACACCAAGAATCCAACAAGAGCAAGA
JMSF037O17+           ATCAGCGCCTCGGGAACACTCCATATAAACGGGAACACCAAGAATCCAACAAGAGCAAGA
JMSF038I22+           ATCAGCGCCTCGGGAACACTCCATATAAACGGGAACACCAAGAATCCAACAAGAGCAAGA
JMFF027K12+                                                      ATCCAACAAGAGCAAGA
JMFF019K18+           ATCAGCGCCTCGGGAACACTCCATATAAACGGGAACACCAAGAATCCAACAAGAGCAAGA
                      ____________________________________________________________
consensus             ATCAGCGCCTCGGGAACACTCCATATAAACGGGAACACCAAGAATCCAACAAGAGCAAGA
 
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JMFF042M02+           AGGGGACCAGCAGCATGAACACTATCCTCAACACCAAACGGCCCTCCCGACACTTCATAG
JMSF024K02+           AGGGGACCAGCAGCATGAACACTATCCTCAACACCAAACGGCCCTCCCGACACTTCATAG
JMFF044M24+           AGGGGACCAGCAGCATGAACACTATCCTCAACACCAAACGGCCCTCCCGACACTTCATAG
JMSF037O17+           AGGGGACCAGCAGCATGAACACTATCCTCAACACCAAACGNCCCTCCCGACACTTCATAG
JMSF038I22+           AGGGGACCAGCAGCATGAACACTATCCTCAACACCAAACGGCCCTCCCGACACTTCATAG
JMFF027K12+           AGGGGACCAGCAGCATGAACACTATCCTCAACACCAAACGGCCCTCCCGACACTTCATAG
JMFF019K18+           AGGGGACCAGCAGCATGAACACTATCCTCAACACCAAACGGCCCTCCCGACACTTCATAG
                      ____________________________________________________________
consensus             AGGGGACCAGCAGCATGAACACTATCCTCAACACCAAACGGCCCTCCCGACACTTCATAG
 
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JMFF042M02+           AAGATGAGAAAAACGAGGGGCAAGACTGAAACTTTCCGGGCACTATTCGCCCTCGGAGAA
JMSF024K02+           AAGATGAGAAAAACGAGGGGCAAGACTGAAACTTTCCGGGCACTATTCGCCCTCGGAGAA
JMFF044M24+           AAGATGAGAAAAACGAGGGGCAAGACTGAAACTTTCCGGGCAATATTCGCCCTCGGAGAA
JMSF037O17+           AAGATGAGAAAAACGAGGGGCAAGACTGAAACTTTCCGGGCACTATTCGCCCTCGGAGAA
JMSF038I22+           AAGATGAGAAAAACGAGGGGCAAGACTGAAACTTTCCGGGCANTATTCGCCCTCGGAGAA
JMFF027K12+           AAGATGAGAAAAACGAGGGGCAAGACTGAAACTTTCCGGGCACTATTCGCCCTCGGAGAA
JMFF019K18+           AAGATGAGAAAAACGAGGGGCAAGACTGAAACTTTCCGGGCACTATTCGCCCTCGGAGAA
                      ____________________________________________________________
consensus             AAGATGAGAAAAACGAGGGGCAAGACTGAAACTTTCCGGGCACTATTCGCCCTCGGAGAA
 
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JMFF042M02+           GATGGAACTTCATCTATCACAGTGTACGTCGCACCACCATCAAACTCCCCCATTTGAACC
JMSF024K02+           GATGGAACTTCATCTATCACAGTGTACGTCGCACCACCATCAAACTCCCCCATTTGAACC
JMFF044M24+           GATGGAACTTCATCTATCACAGTGTACGTCGCACCACCATCAAACTCCCCCATTTGAACC
JMSF037O17+           GATGGAACTTCATCTATCACAGTGTACGTCGCACCACCATCAAACTCCCCCATTTGAACC
JMSF038I22+           GATGGAACTTCATCTATCACAGTGTACGTCGCACCACCATCAAACTCCCCCATTTGAACC
JMFF027K12+           GATGGAACTTCATCTATCACAGTGTACGTCGCACCACCATCAAACTCCCCCATTTGAACC
JMFF019K18+           GATGGAACTTCATCTATCACAGTGTACGTCGCACCACCATCAAACTCCCCCATTTGAACC
                      ____________________________________________________________
consensus             GATGGAACTTCATCTATCACAGTGTACGTCGCACCACCATCAAACTCCCCCATTTGAACC
 
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JMFF042M02+           GAGGTCTCTCTATTCGGTGTACCCCTATATTTCATGAAAGAAAGGCGATTGGGAAGATGA
JMSF024K02+           GAGGTCTCTCTATTCGGTGTACCCCTATATTTCATGAAAGAAAGGCGATTGGGAAGATGA
JMFF044M24+           GAGGTCTCTCTATTCGGTGTACCCCTATATTTCATGAAAGAAAGGCGATTGGGAAGATGA
JMSF037O17+           GAGGTCTCTCTATTCGGTGTACCCCTATATTTCATGAAAGAAAGGCGATTGGGAAGATGA
JMSF011B10+                                                              GGAAGATGA
JMSF038I22+           GAGGTCTCTCTATTCGGTGTACCCCTATATTTCATGAAAGAAAGGCGATTGGGAAGATGA
JMFF027K12+           GAGGTCTCTCTATTCGGTGTACCCCTATATTTCATGAAAGAAAGGCGATTGGGAAGATGA
JMFF019K18+           GAGGTCTCTCTATTCGGTGTACCCCTATATTTCATGAAAGAAAGGCGATTGGGAAGATGA
                      ____________________________________________________________
consensus             GAGGTCTCTCTATTCGGTGTACCCCTATATTTCATGAAAGAAAGGCGATTGGGAAGATGA
 
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JMFF042M02+           GCTCCGTCATTGTAGGACACAGAGTTGAGGGAAAGCTAGAGACTTTGCGAGTAGAATCCG
JMSF024K02+           GCTCCGTCATTGTAGGACACAGAGTTGAGGGAAAGCTAGAGACTTTGCGAGTAGAATCCG
JMFF044M24+           GCTCCGTCATTGTAGGACACAGAGTTGAGGGAAAGCTAGAGACTTTGCGAGTAGAATCCG
JMSF037O17+           GCTCCGTCATTGTAGGACACAGAGTTGAGGGAAAGCTAGAGACTTTGCGAGTAGAATCCG
JMSF011B10+           GCTCCGTCATTGTAGGACACAGAGTTGAGGGAAAGCTAGAGACTTTGCGAGTAGAATCCG
JMSF038I22+           GCTCCGTCATTGTAGGACACAGAGTTGAGGGAAAGCTAGAGACTTTGCGAGTAGAATCCG
JMFF027K12+           GCTCCGTCATTGTAGGACACAGAGTTGAGGGAAAGCTAGAGACTTTGCGAGTAGAATCCG
JMFF019K18+           GCTCCGTCATTGTAGGACACAGAGTTGAGGGAAAGCTAGAGACTTTGCGAGTAGAATCCG
                      ____________________________________________________________
consensus             GCTCCGTCATTGTAGGACACAGAGTTGAGGGAAAGCTAGAGACTTTGCGAGTAGAATCCG
 
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JMFF042M02+           CAAATCCATGGCGGATGATGATGGCAAAGGGTAGCTCTTCCGCTCTGGGATTCTGGGTAT
JMSF024K02+           CAAATCCATGGCGGATGATGATGGCAAAGGGTAGCTCTTCCGCTCTGGGATTCTGGGTAT
JMFF044M24+           CAAATCCATGGCGGATGATGATGGCAAAGGGTAGCTCTTCCGCTCTGGGATTCTGGGTAT
JMSF037O17+           CAAATCCATGGCGGATGATGATGGCAAAGGGTAGCTCTTCCGCTCTGGGATTCTGGGTAT
JMSF011B10+           CAAATCCATGGCGGATGATGATGGCAAAGGGTAGCTCTTCCGCTCTGGGATTCTGGGTAT
JMSF038I22+           CAAATCCATGGCGGATGATGATGGCAAAGGGTAGCTCTTCCGCTCTGGGATTCTGGGTAT
JMFF027K12+           CAAATCCATGGCGGATGATGATGGCAAAGGGTAGCTCTTCCGCTCTGGGATTCTGGGTAT
JMFF019K18+           CAAATCCATGGCGGATGATGATGGCAAAGGGTAGCTCTTCCGCTCTGGGATTCTGGGTAT
                      ____________________________________________________________
consensus             CAAATCCATGGCGGATGATGATGGCAAAGGGTAGCTCTTCCGCTCTGGGATTCTGGGTAT
 
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JMFF042M02+           CAACGTGGGGCGGCGGAAAGTTGCGTCGGTCGATCGGTCTCAGCGATTCTTGTTCTGCAA
JMSF024K02+           CAACGTGGGGCGGCGGAAAGTTGCGTCGGTCGATCGGTCTCAGCGATTCTTGTTCTGCAA
JMFF044M24+           CAACGTGGGGCGGCGGAAAGTTGCGTCGGTCGATCGGTCTCAGCGATTCTTGTTCTGCAA
JMSF037O17+           CAACGTGGGGCGGCGGAAAGTTGCGTCGGTCGATCGGTCTCAGCGATTCTTGTTCTGCAA
JMSF011B10+           CAACGTGGGGCGGCGGAAAGTTGCGTCGGTCGATCGGTCTCAGCGATTCTTGTTCTGCAA
JMSF038I22+           CAACGTGGGGCGGCGGAAAGTTGCGTCGGTCGATCGGTCTCAGCGATTCTTGTTCTGCAA
JMFF027K12+           CAACGTGGGGCGGCGGAAAGTTGCGTCGGTCGATCGGTCTCAGCGATTCTTGTTCTGCAA
JMFF019K18+           CAACGTGGGGCGGCGGAAAGTTGCGTCGGTCGATCGGTCTCAGCGATTCTTGTTCTGCAA
                      ____________________________________________________________
consensus             CAACGTGGGGCGGCGGAAAGTTGCGTCGGTCGATCGGTCTCAGCGATTCTTGTTCTGCAA
 
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JMFF042M02+           CCCCCAGCGCCCCGAGTTCAGTGCGCCCC                               
JMSF024K02+           CCCCCAGCGCCCCGAGTTCAGTGCGC                                  
JMFF044M24+           CCCCCAGCGCCCCGAGTTCAGTGCGCCCCC                              
JMSF037O17+           CCCCCAGCGCCCCGAGTTCAGTGCGCCCCC                              
JMSF011B10+           CCCCCAGCGCCCCGAGTTCAGTGCGC                                  
JMSF038I22+           CCCCCAGCGCCCCGAGTTCAGTGCGCCCCC                              
JMFF027K12+           CCCCCAGCGCCCCGAGTTCAGTGCGCCCC                               
JMFF019K18+           CCCCCAGCGCCCCGAGTTCAGTGCGCCCCATTACACTCCATTTTTTCTTTTACTTTTTAT
                      ____________________________________________________________
consensus             CCCCCAGCGCCCCGAGTTCAGTGCGCCCCCTTACACTCCATTTTTTCTTTTACTTTTTAT