Contig 007347:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF037N19-                                                             GAAGATCAG
rJMFF017A23-                                                              AAGATCAG
                      ____________________________________________________________
consensus                                                                GAAGATCAG
 
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rJMFF037N19-          ACGTACAATGGAGCATCACATTTACTGATTTACCGTCCAAATTGAACGAACAGTGTTGGA
rJMFF017A23-          ACGTACAATGGAGCATCACATTTACTGATTTACCGTCCAAATTGAACGAACAGTGTTGGA
                      ____________________________________________________________
consensus             ACGTACAATGGAGCATCACATTTACTGATTTACCGTCCAAATTGAACGAACAGTGTTGGA
 
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rJMFF037N19-          CGATATACAACAATTCAACAACGTAACCTTATTCAGATAAGAAACAATGGACTAGTACAG
rJMFF017A23-          CGATATACAACAATTCAACAACGTAACCTTATTCAGATAAGAAACAATGGACTAGTACAG
                      ____________________________________________________________
consensus             CGATATACAACAATTCAACAACGTAACCTTATTCAGATAAGAAACAATGGACTAGTACAG
 
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rJMFF037N19-          ATATATATATATATATACCTGCAGACTCGAAGACCTTAATTTAAAGCGTAAAACTGAAAG
rJMFF017A23-          ATATATATATATATATACCTGCAGACTCGAAGACCTTAATTTAAAGCGTAAAACTGAAAG
                      ____________________________________________________________
consensus             ATATATATATATATATACCTGCAGACTCGAAGACCTTAATTTAAAGCGTAAAACTGAAAG
 
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rJMFF037N19-          AAAAGTCACCGATCGAATTGAAGCGAAGATTGCGTATTGCAGTTTCCAATAATGAGGTGA
rJMFF017A23-          AAAAGTCACCGATCGAATTGAAGCGAAGATTGCGTATTGCAGTTTCCAATAATGAGGTGA
                      ____________________________________________________________
consensus             AAAAGTCACCGATCGAATTGAAGCGAAGATTGCGTATTGCAGTTTCCAATAATGAGGTGA
 
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rJMFF037N19-          ATGAGTTGACCAGTGAGGACTGGATCGGTACGGTGTCGTGGCTACTGTTCCCGGCCTCCG
rJMFF017A23-          ATGAGTTGACCAGTGAGGACTGGATCGGTACGGTGTCGTGGCTACTGTTCCCGGCCTCCG
                      ____________________________________________________________
consensus             ATGAGTTGACCAGTGAGGACTGGATCGGTACGGTGTCGTGGCTACTGTTCCCGGCCTCCG
 
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rJMFF037N19-          GAGCGGCGCTGGTGAACGATGCCGGAGAAATTTCCGGAGAGATCGGAATACATTCCGACG
rJMFF017A23-          GAGCGGCGCTGGTGAACGATGCCGGAGAAATTTCCGGAGAGATCGGAATACATTCCGACG
                      ____________________________________________________________
consensus             GAGCGGCGCTGGTGAACGATGCCGGAGAAATTTCCGGAGAGATCGGAATACATTCCGACG
 
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rJMFF037N19-          ACTTTGGAGATATTCCCGTTGATCTCGCGAATCAGATCCACGTTCCTGGCGATGTTATTT
rJMFF017A23-          ACTTTGGAGATATTCCCGTTGATCTCGCGAATCAGATCCACGTTCCTGGCGATGTTATTT
                      ____________________________________________________________
consensus             ACTTTGGAGATATTCCCGTTGATCTCGCGAATCAGATCCACGTTCCTGGCGATGTTATTT
 
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rJMFF037N19-          GGAAGCTTCGACTGGTGGTTCTCGTTGACCTGCTGAATCAGAGTCCGGTTCTGATCCAGC
rJMFF017A23-          GGAAGCTTCGACTGGTGGTTCTCGTTGACCTGCTGAATCAGAGTCCGGTTCTGATCCAGC
JMFF017A23+                                            TGAATCAGAGTCCGGTTCTGATCCAGC
                      ____________________________________________________________
consensus             GGAAGCTTCGACTGGTGGTTCTCGTTGACCTGCTGAATCAGAGTCCGGTTCTGATCCAGC
 
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rJMFF037N19-          ACCGTCTGAACATCACGGAAACTCTGGCTCAGCGTCTCCCACGCCTCCTGATCGCACTCC
rJMFF017A23-          ACCGTCTGAACATCACGGAAACTCTGGCTCAGCGTCTCCCACGCCTCCTGATCGCACTCC
JMFF017A23+           ACCGTCTGAACATCACGGAAACTCTGGCTCAGCGTCTCCCACGCCTCCTGATCGCACTCC
                      ____________________________________________________________
consensus             ACCGTCTGAACATCACGGAAACTCTGGCTCAGCGTCTCCCACGCCTCCTGATCGCACTCC
 
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rJMFF037N19-          TCGCCGCCGACTTCCTCTCCCTCTTCCTTCTCACTCTCGTATTGCTTCCTCCCGCCACTG
rJMFF017A23-          TCGCCGCCGACTTCCTCTCCCTCTTCCTTCTCACTCTCGTATTGCTTCCTCCCGCCACTG
JMFF037N19+                                  TTCCTTCTCACTCTCGTATTGCTTCCTCCCGCCACTG
JMFF017A23+           TCGCCGCCGACTTCCTCTCCCTCTTCCTTCTCACTCTCGTATTGCTTCCTCCCGCCACTG
                      ____________________________________________________________
consensus             TCGCCGCCGACTTCCTCTCCCTCTTCCTTCTCACTCTCGTATTGCTTCCTCCCGCCACTG
 
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rJMFF037N19-          AAACGGNTTCCTCCGCCTCCGCCGCCGCCGCCGCTTCGTTTCAAATGCTTCTTTACGGCT
rJMFF017A23-          AAACGGCTTCCTCCGCCTCCGCCGCCGCCGCCGCTTCGTTTCAAATGCTTCTTTACGGCT
JMFF037N19+           AAACGGCTTCCTCCGCCTCCGCCGCCGCCGCCGCTTCGTTTCAAATGCTTCTTTACGGCT
JMFF017A23+           AAACGGCTTCCTCCGCCTCCGCCGCCGCCGCCGCTTCGTTTCAAATGCTTCTTTACGGCT
                      ____________________________________________________________
consensus             AAACGGCTTCCTCCGCCTCCGCCGCCGCCGCCGCTTCGTTTCAAATGCTTCTTTACGGCT
 
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rJMFF037N19-          CGTGACGTGTTCTCCATGCTCCGATCCAACTCCACCACTCCG                  
rJMFF017A23-          CGTGACGTGTTCTCCATGCTCCGATCCAACTCCACCACTCCGACCTCAACTGTACTTACG
JMFF037N19+           CGTGACGTGTTCTCCATGCTCCGATCCAACTCCACCACTCCGACCTCAACTGTACTTACG
JMFF017A23+           CGTGACGTGTTCTCCATGCTCCGATCCAACTCCACCACTCCGACCTCAACTGTACTTACG
                      ____________________________________________________________
consensus             CGTGACGTGTTCTCCATGCTCCGATCCAACTCCACCACTCCGACCTCAACTGTACTTACG
 
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rJMFF017A23-          ATCCATATACATACATACACACATATATATAGCTAGATATTTATCGATAATATTCGATTT
JMFF037N19+           ATCCATATACATACATACACACATATATATAGCTAGATATTTATCGATAATATTCGATTT
JMFF017A23+           ATCCATATACATACATACACACATATATATAGCTAGATATTTATCGATAATATTCGATTT
                      ____________________________________________________________
consensus             ATCCATATACATACATACACACATATATATAGCTAGATATTTATCGATAATATTCGATTT
 
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rJMFF017A23-          TTCAATCAATCTCTAGCTT                                         
JMFF037N19+           TTCAATCAATCTCTAGCTTTTTGAATTGGGGGCGAATTAATAAAAAAAGGAAAAGAAAAT
JMFF017A23+           TTCAATCAATCTCTAGCTTTTTGAATTGGGGGCGAATTAATAAAAAAAGGAAAAGAAAAT
                      ____________________________________________________________
consensus             TTCAATCAATCTCTAGCTTTTTGAATTGGGGGCGAATTAATAAAAAAAGGAAAAGAAAAT
 
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JMFF037N19+           AGAATCAAATTTATCTGGTTTTATGGAGAGAGAATTGACGGACGGCGGTAACGGAGGAAG
JMFF017A23+           AGAATCAAATTTATCTGGTTTTATGGAGAGAGAATTGACGGACGGCGGTAACGGAGGAAG
                      ____________________________________________________________
consensus             AGAATCAAATTTATCTGGTTTTATGGAGAGAGAATTGACGGACGGCGGTAACGGAGGAAG
 
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JMFF037N19+           GAACTGCCGAAGTCGTAAATGGCGAGCATTTTCGTAGGGATGATGCCGAGGCGTGGGAAT
JMFF017A23+           GAACTGCCGAAGTCGTAAATGGCGAGCATTTTCGTAGGGATGATGCCGAGGCGTGGGAAT
                      ____________________________________________________________
consensus             GAACTGCCGAAGTCGTAAATGGCGAGCATTTTCGTAGGGATGATGCCGAGGCGTGGGAAT
 
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JMFF037N19+           CAGGGATTGGTCTGTCACGGAGAGTAATGTGACCGTTGAATGGGTTGGAGGGGTG     
JMFF017A23+           CAGGGATTGGTCTGTCACGGAGAGTAATGTGACCGTTGAATGGGTTGGAGGGGTGGACTC
                      ____________________________________________________________
consensus             CAGGGATTGGTCTGTCACGGAGAGTAATGTGACCGTTGAATGGGTTGGAGGGGTGGACTC