Contig 007342:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF015I22Sequence569007342 (6)ref|XP_006344987.1|3e-45PREDICTED: transcription factor MYB1R1-like [Solanum tuberosum]222011020 (3)
JMFF031O05Sequence635007342 (6)ref|XP_006344987.1|2e-70PREDICTED: transcription factor MYB1R1-like [Solanum tuberosum]357011020 (3)
JMFS119C04Sequence627007342 (6)ref|XP_006344987.1|9e-70PREDICTED: transcription factor MYB1R1-like [Solanum tuberosum]
JMFS140D11Sequence613007342 (6)ref|XP_006344987.1|4e-70PREDICTED: transcription factor MYB1R1-like [Solanum tuberosum]
JMSF005H02Sequence388007342 (6)ref|XP_006344987.1|1e-38PREDICTED: transcription factor MYB1R1-like [Solanum tuberosum]
JMSF046D05Sequence652007342 (6)ref|XP_006344987.1|7e-63PREDICTED: transcription factor MYB1R1-like [Solanum tuberosum]229011020 (3)

Alignment

This contig is upended


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JMFF031O05+                                                             GGGAGGATTC
                      ____________________________________________________________
consensus                                                               GGGAGGATTC
 
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JMFF031O05+           AGAAATTGATAATGATGTTGGTGATACAACCTGTGGAACCTGACTTTCTTGAGAAGCCTT
                      ____________________________________________________________
consensus             AGAAATTGATAATGATGTTGGTGATACAACCTGTGGAACCTGACTTTCTTGAGAAGCCTT
 
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JMFS140D11+                              GGAGACACCGATTCAGTGGTGATATCGAACAGGCTAGATCG
JMFF031O05+           TCCTTCATCCATGGAATATGGAGACACCGATTCAGTGGTGATATCGAACAGGCTAGATCG
JMSF046D05+                                                                     CG
                      ____________________________________________________________
consensus             TCCTTCATCCATGGAATATGGAGACACCGATTCAGTGGTGATATCGAACAGGCTAGATCG
 
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JMFS140D11+           GCGGCGACGGCGGTTGAGGTTGCTCCGTCTAAGGAAGTATTTCTGAGCATGACTTGCCAC
JMFF031O05+           GCGGCGACGGCGGTTGAGGTTGCTCCGTCTAAGGAAGTATTTCTGAGCATGACTTGCCAC
JMFS119C04+                                             AAGTATTTCTGAGCATGACTTGCCAC
JMSF046D05+           GCGGCGACGGCGGTTGAGGTTGCTCNGTCTAAGGAAGTATTTCTGAGCATGACTTGCCAC
                      ____________________________________________________________
consensus             GCGGCGACGGCGGTTGAGGTTGCTCCGTCTAAGGAAGTATTTCTGAGCATGACTTGCCAC
 
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JMFS140D11+           TTGTGTAGGGGTGCGAGTCTTCACGAAATTTCTAGAGATTCCTCTCCAGTCTCCTTTTCC
JMFF031O05+           TTGTGTAGGGGTGCGAGTCTTCACGAAATTTCTAGAGATTCCTCTCCAGTCTCCTTTTCC
JMFS119C04+           TTGTGTAGGGGTGCGAGTCTTCACGAAATTTCTAGAGATTCCTCTCCAGTCTCCTTTTCC
JMSF046D05+           TTGTGTAGGGGTGCGAGTCTTCACGAAATTTCTAGAGATTCCTCTCCAGTCTCCTTTTCC
JMFF015I22+                                          CTAGAGATTCCTCTCCAGTCTCNTTTTCC
                      ____________________________________________________________
consensus             TTGTGTAGGGGTGCGAGTCTTCACGAAATTTCTAGAGATTCCTCTCCAGTCTCCTTTTCC
 
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JMFS140D11+           GACTTTCTGCAACCCCAAAAGGAACAGCTTGTGTTCTTCCTCTGTCCATGGAACTCCTCG
JMFF031O05+           GACTTTCTGCAACCCCAAAAGGAACAGCTTGTGTTCTTCCTCTGTCCATGGAACTCCTCG
JMSF005H02+               TTCTGCAACCCCAAAAGGAACAGCTTGTGTTCTTCCTCTGTCCATGGAACTCCTCG
JMFS119C04+           GACTTTCTGCAACCCCAAAAGGAACAGCTTGTGTTCTTCCTCTGTCCATGGAACTCCTCG
JMSF046D05+           GACTTTCTGCAACCCCAAAAGGAACAGCTTGTGTTCTTCCTCTGTCCATGGAACTCCTCG
JMFF015I22+           GACTTTCTGCAACCCCAAAAGGAACAGCTTGTGTTCTTCCTCTGTCCATGGAACTCCTCG
                      ____________________________________________________________
consensus             GACTTTCTGCAACCCCAAAAGGAACAGCTTGTGTTCTTCCTCTGTCCATGGAACTCCTCG
 
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JMFS140D11+           CTTTCGCTCGCGGCCACTGCTAGACTGGTTAGGAACGGCGTCATCTGCCGAAGCATAGCC
JMFF031O05+           CTTTCGCTCGCGGCCACTGCTAGACTGGTTAGGAACGGCGTCATCTGCCGAAGCATAGCC
JMSF005H02+           CTTTCGCTCGCGGCCACTGCTAGACTGGTTAGGAACGGCGTCATCTGCCGAAGCATAGCC
JMFS119C04+           CTTTCGCTCGCGGCCACTGCTAGACTGGTTAGGAACGGCGTCATCTGCCGAAGCATAGCC
JMSF046D05+           CTTTCGCTCGCGGCCACTGCTAGACTGGTTAGGAACGGCGTCATCTGCCGAAGCATAGCC
JMFF015I22+           CTTTCGCTCGCGGCCACTGCTAGACTGGTTAGGAACGGCGTCATCTGCCGAAGCATAGCC
                      ____________________________________________________________
consensus             CTTTCGCTCGCGGCCACTGCTAGACTGGTTAGGAACGGCGTCATCTGCCGAAGCATAGCC
 
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JMFS140D11+           TTCGTCAGCTGCTGCTTTGGTTGAATCATTGTTTCCACTGTTCTTGTTGTCGTCATTCGG
JMFF031O05+           TTCGTCAGCTGCTGCTTTGGTTGAATCATTGTTTCCACTGTTCTTGTTGTCGTCATTCGG
JMSF005H02+           TTCGTCAGCTGCTGCTTTGGTTGAATCATTGTTTCCACTGTTCTTGTNGTCGTCATTCGG
JMFS119C04+           TTCGTCAGCTGCTGCTTTGGTTGAATCATTGTTTCCACTGTTCTTGTTGTCGTCATTCGG
JMSF046D05+           TTCGTCAGCTGCTGCTTTGGTTGAATCATTGTTTCCACTGTTCTTGTNGTCGTCATTCGG
JMFF015I22+           TTCGTCAGCTGCTGCTTTGGTTGAATCATTGTTTCCACTGTTCTTGTTGTCGTCATTCGG
                      ____________________________________________________________
consensus             TTCGTCAGCTGCTGCTTTGGTTGAATCATTGTTTCCACTGTTCTTGTTGTCGTCATTCGG
 
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JMFS140D11+           CTGCTCGTACTGAGACAAGTTATTCAGACTGACGCTCTTCCTCATAGGGTCAACCTTCAC
JMFF031O05+           CTGCTCGTACTGAGACAAGTTATTCAGACTGACGCTCTTCCTCATAGGGTCAACCTTCAC
JMSF005H02+           CTGCTCGTACTGAGACAAGTTATTCAGACTGACGCTCTTCCTCATAGGGTCAACCTTCAC
JMFS119C04+           CTGCTCGTACTGAGACAAGTTATTCAGACTGACGCTCTTCCTCATAGGGTCAACCTTCAC
JMSF046D05+           CTGCTCGTACTGAGACAAGTTATTCAGACTGACGCTCTTCCTCATAGGGTCAACCTTCAC
JMFF015I22+           CTGCTCGTACTGAGACAAGTTATTCAGACTGACGCTCTTCTTCATAGGGTCAACCTTCAC
                      ____________________________________________________________
consensus             CTGCTCGTACTGAGACAAGTTATTCAGACTGACGCTCTTCCTCATAGGGTCAACCTTCAC
 
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JMFS140D11+           TCTCACACCAAACAGCATGATCTCGCCGGAACCGCCGGACGCGGCCGACACCGACGAGGA
JMFF031O05+           TCTCACACCAAACAGCATGATCTCGCCGGAACCGCCGGACGCGGCCGACACCGACGAGGA
JMSF005H02+           TCTCACACCAAACAGCATGATCTCGCCGGAACCGCCGGACGCGGCCGACACCGACGAGGA
JMFS119C04+           TCTCACACCAAACAGCATGATCTCGCCGGAACCGCCGGACGCGGCCGACACCGACGAGGA
JMSF046D05+           TCTCACACCAAACAGCATGATCTCGCCGGAACCGCCGGACGCGGCCGACACCGACGAGGA
JMFF015I22+           TCTCACACCAAACAGCATGATCTCGCCGGAACCGCCGGACGCGGCCGACACCGACGAGGA
                      ____________________________________________________________
consensus             TCTCACACCAAACAGCATGATCTCGCCGGAACCGCCGGACGCGGCCGACACCGACGAGGA
 
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JMFS140D11+           CTCCCCGCAACTGCGTGAATTGTGGCCGTTGCTTCCATACTGCGTGCAGCAGCGCGTGGC
JMFF031O05+           CTCCCCGCAACTGCGTGAATTGTGGCCGTTGCTTCCATACTGCGTGCAGCAGCGCGTGGC
JMSF005H02+           CTCCCCGCAACTGCGTGAATTGTGGCCGTTGCTTCCATACTGCGTGCAGCAGCGCGTGGC
JMFS119C04+           CTCCCCGCAACTGCGTGAATTGTGGCCGTTGCTTCCATACTGCGTGCAGCAGCGCGTGGC
JMSF046D05+           CTCCCCGCAACTGCGTGAATTGTGGCCGTTGCTTCCATACTGCGTGCAGCAGCGCGTGGC
JMFF015I22+           CTCCCCGCAACTGCGTGAATTGTGGCCGTTGCTTCCATACTGCGTGCAGCAGCGCGTGGC
                      ____________________________________________________________
consensus             CTCCCCGCAACTGCGTGAATTGTGGCCGTTGCTTCCATACTGCGTGCAGCAGCGCGTGGC
 
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JMFS140D11+           CATCT                                                       
JMFF031O05+           CATCTTCTTCCCCTCGAGAATCGAT                                   
JMSF005H02+           CATCTTCTTCCCCTCGAGAATCGATGAATTT                             
JMFS119C04+           CATCTTCTTCCCCTCGAGAATCGATGAATTT                             
JMSF046D05+           CATCTTNTTCCCCTCGAGAATCGATGAATTTATTGTTCAGTCANCCAAACTGTAAATATA
JMFF015I22+           CATCTTNTTCCCCTCGAGAATCGATGAATTTATTGTTCAGTCANCCAAACTGTAAATATA
                      ____________________________________________________________
consensus             CATCTTCTTCCCCTCGAGAATCGATGAATTTATTGTTCAGTCANCCAAACTGTAAATATA
 
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JMSF046D05+           TATAGAGAGTTTGGGAAGAATATATATATATATATAGAGAGAGAGAGAGAGAGAGATTTA
JMFF015I22+           TATAGAGAGTTTGGGAAGAATATATATATATATATAGAGAGAGAGAGAGAGAGAGATTTA
                      ____________________________________________________________
consensus             TATAGAGAGTTTGGGAAGAATATATATATATATATAGAGAGAGAGAGAGAGAGAGATTTA
 
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JMSF046D05+           TATATTCAGAGAGAGAAAGGAAGGAGTGAGGAAACGTATCGTCTGCGTT           
JMFF015I22+           TATATTCAGAGAGAGAAAGGAAGGAGTGAGGAAACGTATCGTCTGCGTTGAGGCTCCAGT
                      ____________________________________________________________
consensus             TATATTCAGAGAGAGAAAGGAAGGAGTGAGGAAACGTATCGTCTGCGTTGAGGCTCCAGT