Contig 007331:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF013L20Sequence547007331 (3)ref|XP_006361141.1|1e-45PREDICTED: molybdopterin synthase catalytic subunit-like [Solanum tuberosum]718007331 (3)ref|XP_006361141.1|2e-91PREDICTED: molybdopterin synthase catalytic subunit-like [Solanum tuberosum]
JMFN025E06Sequence560007331 (3)ref|XP_006361141.1|1e-81PREDICTED: molybdopterin synthase catalytic subunit-like [Solanum tuberosum]

Alignment

This contig is upended


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JMFN025E06+                             ACATGCCTGCAAGTCTGCAACAGAATAAAAGGAAATTGTAGA
rJMFF013L20-                                                                 GTAGA
                      ____________________________________________________________
consensus                               ACATGCCTGCAAGTCTGCAACAGAATAAAAGGAAATTGTAGA
 
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JMFN025E06+           AACTATTATCTTTATTCTTTTTAAATATGATGGGTAGGGGTCACCTAGAAGGAATCAGCA
rJMFF013L20-          AACTATTATCTTTATTCTTTTTAAATATGATGGGTAGGGGTCACCTAGAAGGAATCAGCA
                      ____________________________________________________________
consensus             AACTATTATCTTTATTCTTTTTAAATATGATGGGTAGGGGTCACCTAGAAGGAATCAGCA
 
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JMFN025E06+           GTTTTATCATCAATTCTAACCTTTGTCCCACAGCAACACCCCTTTTTATCATGAGCCTCA
rJMFF013L20-          GTTTTATCATCAATTCTAACCTTTGTCCCACAGCAACACCCCTTTTTATCATGAGCCTCA
                      ____________________________________________________________
consensus             GTTTTATCATCAATTCTAACCTTTGTCCCACAGCAACACCCCTTTTTATCATGAGCCTCA
 
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JMFN025E06+           ACTTTAATGCCCTGTGATTCTGTCAAATTCTCAGCATCCAGCATTCTCTCCAGGAACTCT
rJMFF013L20-          ACTTTAATGCCCTGTGATTCTGTCAAATTCTCAGCATCCAGCATTCTCTCCAGGAACTCT
                      ____________________________________________________________
consensus             ACTTTAATGCCCTGTGATTCTGTCAAATTCTCAGCATCCAGCATTCTCTCCAGGAACTCT
 
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JMFN025E06+           TTGTTTTCTTTCCAGACCTCTCCATTAGTATACACTTCCTTCTTCCAAATGGGAACCGAA
rJMFF013L20-          TTGTTTTCTTTCCAGACCTCTCCATTAGTATACACTTCCTTCTTCCAAATGGGAACCGAA
                      ____________________________________________________________
consensus             TTGTTTTCTTTCCAGACCTCTCCATTAGTATACACTTCCTTCTTCCAAATGGGAACCGAA
 
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JMFN025E06+           GCTTTGATCTCATCAATCAGGAATTTGCACGCATCCAACGCATCTGCTCGGTGAACAGCT
rJMFF013L20-          GCTTTGATCTCATCAATCAGGAATTTGCACGCATCCAACGCATCTGCTCGGTGAACAGCT
JMFF013L20+                                                               GAACAGCT
                      ____________________________________________________________
consensus             GCTTTGATCTCATCAATCAGGAATTTGCACGCATCCAACGCATCTGCTCGGTGAACAGCT
 
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JMFN025E06+           GATGTTGCAACATATACGCTGGTCTCCCCGACTGCAACGGGCCCCAGGCAGTGGGCAATG
rJMFF013L20-          GATGTTGCAACATATACGCTGGTCTCCCCGACTGCAACGGGCCCCAGGCAGTGGGCAATG
JMFF013L20+           GATGTTGCAACATATACGCTGGTCTCCCCGACTGCAACGGGCCCCAGGCAGTGGGCAATG
                      ____________________________________________________________
consensus             GATGTTGCAACATATACGCTGGTCTCCCCGACTGCAACGGGCCCCAGGCAGTGGGCAATG
 
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JMFN025E06+           GCAATTGCGTGGAGATTCCAGGTTGATCGAGCAGAGGAGCACATAGACTGGATACACCGT
rJMFF013L20-          GCAATTGCGTGGAGATTCCAGGTTGATCGAGCAGAGGAGCACATAGACTGGATACACCGT
JMFF013L20+           GCAATTGCGTGGAGATTCCAGGTTGATCGAGCAGAGGAGCACATAGACTGGATACACCGT
                      ____________________________________________________________
consensus             GCAATTGCGTGGAGATTCCAGGTTGATCGAGCAGAGGAGCACATAGACTGGATACACCGT
 
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JMFN025E06+           ATTGCCATTGGAGTGTATGCCTCGTATCTAAGCTCTAGTACTTGTTTGCCATCAAATGTA
rJMFF013L20-          ATTGCCATTGGAGTGTATGCCTCGTATCTAAGCTCTAGTACTTGTTTGCCATCAAATGTA
JMFF013L20+           ATTGCCATTGGAGTGTATGCCTCGTATCTAAGCTCTAGTACTTGTTTGCCATCAAATGTA
                      ____________________________________________________________
consensus             ATTGCCATTGGAGTGTATGCCTCGTATCTAAGCTCTAGTACTTGTTTGCCATCAAATGTA
 
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JMFN025E06+           TCCCGAGTTGTGCCAGCAAAAGTGGCTATAGCACCACA                      
rJMFF013L20-          TCCCGAGTTGTGCCAGCAAAAGTGGCTATAGCACCACACTGTGGGGACTGAACGTAACTG
JMFF013L20+           TCCCGAGTTGTGCCAGCAAAAGTGGCTATAGCACCACACTGTGGGGACTGAACGTAACTG
                      ____________________________________________________________
consensus             TCCCGAGTTGTGCCAGCAAAAGTGGCTATAGCACCACACTGTGGGGACTGAACGTAACTG
 
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rJMFF013L20-          ACATATTTGTTGAAGTCTATAGGGTGATTCTCTTCTAAAATCTCGATGAGATTCCTCTCC
JMFF013L20+           ACATATTTGTTGAAGTCTATAGGGTGATTCTCTTCTAAAATCTCGATGAGATTCCTCTCC
                      ____________________________________________________________
consensus             ACATATTTGTTGAAGTCTATAGGGTGATTCTCTTCTAAAATCTCGATGAGATTCCTCTCC
 
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rJMFF013L20-          TCGCCAGCCATCATTAGTCCCGCCTCGCTAGCTCCCTAAAACTGGGGAGCTTTTAAATAT
JMFF013L20+           TCGCCAGCCATCATTAGTCCCGCCTCGCTAGCTCCCTAAAACT-GGGAGCTTTTAAATAT
                      ____________________________________________________________
consensus             TCGCCAGCCATCATTAGTCCCGCCTCGCTAGCTCCCTAAAACTGGGGAGCTTTTAAATAT
 
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rJMFF013L20-          ATACCCTAATTAAATTGAACTCAGTCG                                 
JMFF013L20+           ATACCCTAATTAAATTGAACTCAGTCGAAGAAGAATGGTACGACGTAGCGTCACCGGTCT
                      ____________________________________________________________
consensus             ATACCCTAATTAAATTGAACTCAGTCGAAGAAGAATGGTACGACGTAGCGTCACCGGTCT
 
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JMFF013L20+           TGCTTCAAGCTTTCTTCAAAGTGAAGCACCAGACAGCGACTTTGCCTTTAAGCGGTGGAA
                      ____________________________________________________________
consensus             TGCTTCAAGCTTTCTTCAAAGTGAAGCACCAGACAGCGACTTTGCCTTTAAGCGGTGGAA
 
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JMFF013L20+           GAAATTGGAACCACGGCGGCACACTTCTCACTGCGACTTGCCTGCAGTGTTTGTTCTGAT
                      ____________________________________________________________
consensus             GAAATTGGAACCACGGCGGCACACTTCTCACTGCGACTTGCCTGCAGTGTTTGTTCTGAT