Contig 007330:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF013H22Sequence576007330 (6)ref|XP_009593407.1|2e-103PREDICTED: protein mago nashi homolog [Nicotiana tomentosiformis] ref|XP_0097606719007330 (6)ref|XP_009593407.1|3e-102PREDICTED: protein mago nashi homolog [Nicotiana tomentosiformis] ref|XP_0097606
JMFN011I04Sequence584007330 (6)ref|XP_009593407.1|5e-103PREDICTED: protein mago nashi homolog [Nicotiana tomentosiformis] ref|XP_0097606
JMFN011N16Sequence555007330 (6)ref|XP_009593407.1|5e-103PREDICTED: protein mago nashi homolog [Nicotiana tomentosiformis] ref|XP_0097606
JMFN038H04Sequence631007330 (6)ref|XP_009593407.1|6e-103PREDICTED: protein mago nashi homolog [Nicotiana tomentosiformis] ref|XP_0097606
JMSF040O22Sequence529002932 (24)145007330 (6)emb|CDY15128.1|6e-07BnaC05g00070D [Brassica napus]

Alignment

This contig is upended


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rJMFF013H22-                                            GTAAATACCATGTCAAAGAACTGTGT
                      ____________________________________________________________
consensus                                               GTAAATACCATGTCAAAGAACTGTGT
 
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rJMFF013H22-          CGGAGTTAGGGATAGTTAAAGACATCACTTGTGAAAATGAAAGCAAGTTGGAAAACATAT
                      ____________________________________________________________
consensus             CGGAGTTAGGGATAGTTAAAGACATCACTTGTGAAAATGAAAGCAAGTTGGAAAACATAT
 
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JMFN011N16+                                                CTGCCAAAACAAAGTGCGCAATA
JMFN011I04+                                                CTGCCAAAACAAAGTGCACAATA
rJMFF013H22-          TTGATTACAAGCTAGACAGAGTCTAGAAGAAAATATGCTGCCAAAACAAAGTGCACAATA
JMFN038H04+                     GCTAGACAGAGTCTAGAAGAAAATATGCTGCCAAAACAAAGTGCACAATA
                      ____________________________________________________________
consensus             TTGATTACAAGCTAGACAGAGTCTAGAAGAAAATATGCTGCCAAAACAAAGTGCACAATA
 
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JMFN011N16+           GCAATCCAGTCTTCTCAATGCAAGCTGGAAGTAGAAAGCCAAACAAAAAAGGCCTCGTTT
JMFN011I04+           ACAATCCAGTCTTCTCAATGCAAGCTGGAAGTAGAAAGCCAAACAAAAAAAGCCTCGTTT
rJMFF013H22-          ACAATCCAGTCTTCTCAATGCAAGCTGGAAGTAGAAAGCCAAACAAAAAAAGCCTCGTTT
JMFN038H04+           ACAATCCAGTCTTCTCAATGCAAGCTGGAAGTAGAAAGCCAAACAAAAAAAGCCTCGTTT
JMFF013H22+                                   CTGGAAGTAGAAAGCCAAACAAAAAAAGCNTCGTTT
                      ____________________________________________________________
consensus             ACAATCCAGTCTTCTCAATGCAAGCTGGAAGTAGAAAGCCAAACAAAAAAAGCCTCGTTT
 
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JMFN011N16+           TAGCACCCGATGAGACCAATTTTATATTGGTTTGATTTTGAAGTGGAGGGAGATCAGCGA
JMFN011I04+           TAGCACCCGATGAGACCAATTTTATATTGGTTTGATTTTGAAGTGGAGGGAGATCAGCGA
rJMFF013H22-          TAGCACCCGATGAGACCAATTTTATATTGGTTTGATTTTGAAGTGGAGGGAGATCAGCGA
JMFN038H04+           TAGCACCCGATGAGACCAATTTTATATTGGTTTGATTTTGAAGTGGAGGGAGATCAGCGA
JMFF013H22+           TAGCACCCGATGAGACCAATTTTATATTGGTTTGATTTTGAAGTGGAGGGAGATCAGCGA
                      ____________________________________________________________
consensus             TAGCACCCGATGAGACCAATTTTATATTGGTTTGATTTTGAAGTGGAGGGAGATCAGCGA
 
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JMFN011N16+           GAACACAAAACACTTCAGATCCTGAACAAGATAATAAAAGATGCGAAGTCCTTCTGGATC
JMFN011I04+           GAACACAAAACACTTCAGATCCTGAACAAGATAATAAAAGATGCGAAGTCCTTCTGGATC
rJMFF013H22-          GAACACAAAACACTTCAGATCCTGAACAAGATAATAAAAGATGCGAAGTCCTTCTGGATC
JMFN038H04+           GAACACAAAACACTTCAGATCCTGAACAAGATAATAAAAGATGCGAAGTCCTTCTGGATC
JMFF013H22+           GAACACAAAACACTTCAGATCCTGAACAAGATAATAAAAGATGCGAAGTCCTTCTGGATC
                      ____________________________________________________________
consensus             GAACACAAAACACTTCAGATCCTGAACAAGATAATAAAAGATGCGAAGTCCTTCTGGATC
 
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JMFN011N16+           TTTACTGGTCTGCACGTCCATCAGAGAACCAATCTTAGACGTAGTAAAAGATATGTGCTC
JMFN011I04+           TTTACTGGTCTGCACGTCCATCAGAGAACCAATCTTAGACGTAGTAAAAGATATGTGCTC
rJMFF013H22-          TTTACTGGTCTGCACGTCCATCAGAGAACCAATCTTAGACGTAGTAAAAGATATGTGCTC
JMFN038H04+           TTTACTGGTCTGCACGTCCATCAGAGAACCAATCTTAGACGTAGTAAAAGATATGTGCTC
JMFF013H22+           TTTACTGGTCTGCACGTCCATCAGAGAACCAATCTTAGACGTAGTAAAAGATATGTGCTC
                      ____________________________________________________________
consensus             TTTACTGGTCTGCACGTCCATCAGAGAACCAATCTTAGACGTAGTAAAAGATATGTGCTC
 
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JMFN011N16+           ATTCCCCATCACAATCTCAAGCTCTTGTCGCCCCACACGGTCTGGTTCTGGCCAATTGTT
JMFN011I04+           ATTCCCCATCACAATCTCAAGCTCTTGTCGCCCCACACGGTCTGGTTCTGGCCAATTGTT
rJMFF013H22-          ATTCCCCATCACAATCTCAAGCTCTTGTCGCCCCACACGGTCTGGTTCTGGCCAATTGTT
JMFN038H04+           ATTCCCCATCACAATCTCAAGCTCTTGTCGCCCCACACGGTCTGGTTCTGGCCAATTGTT
JMFF013H22+           ATTCCCCATCACAATCTCAAGCTCTTGTCGCCCCACACGGTCTGGTTCTGGCCAATTGTT
                      ____________________________________________________________
consensus             ATTCCCCATCACAATCTCAAGCTCTTGTCGCCCCACACGGTCTGGTTCTGGCCAATTGTT
 
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JMFN011N16+           GTCATCTTCCTTCATGATCTCGCTATCGGCGACGATGCGGCGGCATTCTTTGAGAACGGC
JMFN011I04+           GTCATCTTCCTTCATGATCTCGCTATCGGCGACGATGCGGCGGCATTCTTTGAGAACGGC
rJMFF013H22-          GTCATCTTCCTTCATGATCTCGCTATCGGCGACGATGCGGCGGCATTCTTTGAGAACGGC
JMFN038H04+           GTCATCTTCCTTCATGATCTCGCTATCGGCGACGATGCGGCGGCATTCTTTGAGAACGGC
JMFF013H22+           GTCATCTTCCTTCATGATCTCGCTATCGGCGACGATGCGGCGGCATTCTTTGAGAACGGC
                      ____________________________________________________________
consensus             GTCATCTTCCTTCATGATCTCGCTATCGGCGACGATGCGGCGGCATTCTTTGAGAACGGC
 
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JMFN011N16+           AGGGGTGAGGAAGACTTCCTTACGAATCATGGTGTCGTTCTTGTAGTTGGAGTTGTTGGC
JMFN011I04+           AGGGGTGAGGAAGACTTCCTTACGAATCATGGTGTCGTTCTTGTAGTTGGAGTTGTTGGC
rJMFF013H22-          AGGGGTGAGGAAGACTTCCTTACGAATCATGGTGTCGTTCTTGTAGTTGGAGTTGTTGGC
JMFN038H04+           AGGGGTGAGGAAGACTTCCTTACGAATCATGGTGTCGTTCTTGTAGTTGGAGTTGTTGGC
JMFF013H22+           AGGGGTGAGGAAGACTTCCTTACGAATCATGGTGTCGTTCTTGTAGTTGGAGTTGTTGGC
                      ____________________________________________________________
consensus             AGGGGTGAGGAAGACTTCCTTACGAATCATGGTGTCGTTCTTGTAGTTGGAGTTGTTGGC
 
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JMFN011N16+           ATAGCGGAGCTTGCCGTCGGGTCGGAATTCAAACTCCAGAAACTCGTGCCCGAATTTTCC
JMFN011I04+           ATAGCGGAGCTTGCCGTCGGGTCGGAATTCAAACTCCAGAAACTCGTGCCCGAATTTTCC
rJMFF013H22-          ATAGCGGAGCTTGCCGTCGGGTCGGAATTCAAACTCCAGAAACTCGTGCCCGAATTTTCC
JMFN038H04+           ATAGCGGAGCTTGCCGTCGGGTCGGAATTCAAACTCCAGAAACTCGTGCCCGAATTTTCC
rJMSF040O22-                                            TCCAGAAACTCGTGCCCGAATTTTCC
JMFF013H22+           ATAGCGGAGCTTGCCGTCGGGTCGGAATTCAAACTCCAGAAACTCGTGCCCGAATTTTCC
                      ____________________________________________________________
consensus             ATAGCGGAGCTTGCCGTCGGGTCGGAATTCAAACTCCAGAAACTCGTGCCCGAATTTTCC
 
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JMFN011N16+           CTTGTGACCCACGTAGTACCTCAGGTAAAACTCATCGCTCTCTTCCATTCTT        
JMFN011I04+           CTTGTGACCCACGTAGTACCTCAGGTAAAACTCATCGCTCTCTTCCATTCTTGTCACCTC
rJMFF013H22-          CTTGTGACCCACGTAGTACCTCAGGTAAAACTCATCGCTCTCTTCCATTCTTGTCACCTC
JMFN038H04+           CTTGTGACCCACGTAGTACCTCAGGTAAAACTCATCGCTCTCTTCCATTCTTGTCACCTC
rJMSF040O22-          CTTGTGACCCACGTAGTACCTCAGGTAAAACTCATCGCTCTCTTCCATTCTTGTCACCTC
JMFF013H22+           CTTGTGACCCACGTAGTACCTCAGGTAAAACTCATCGCTCTCTTCCATTCTTGTCACCTC
                      ____________________________________________________________
consensus             CTTGTGACCCACGTAGTACCTCAGGTAAAACTCATCGCTCTCTTCCATTCTTGTCACCTC
 
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JMFN011I04+           TTCGCACCTCTTTCTCACTC                                        
rJMFF013H22-          TTCGCACCTCTTTCTCACTCTTATCGCCGCCGG                           
JMFN038H04+           TTCGCACCTCTTTCTCACTCTTATCGCCGCCGGAGATTTTG                   
rJMSF040O22-          TTCGCACCTCTTTCTCACTCTTATCGCCGCCGGAGATTTTGTGAGGACTATTCCTAGCA 
JMFF013H22+           TTCGCACCTCTTTCTCACTCTTATCGCCGCCGGAGATTTTGTGAGGACTATTCCTAGCAG
                      ____________________________________________________________
consensus             TTCGCACCTCTTTCTCACTCTTATCGCCGCCGGAGATTTTGTGAGGACTATTCCTAGCAG