Contig 007329:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF013G05Sequence566007329 (2)764021245emb|CDP12440.1|8e-75unnamed protein product [Coffea canephora]
JMSF029K12Sequence661013152 (2)710007329 (2)gb|ACU17589.1|9e-56unknown [Glycine max]

Alignment

This contig is upended


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rJMSF029K12+                                 TCATTAATAGCATCTGTCANGGCAAGACTGACTACGT
                      ____________________________________________________________
consensus                                    TCATTAATAGCATCTGTCANGGCAAGACTGACTACGT
 
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rJMSF029K12+          ACTGNACATGTGGCACCATTCGTCCATCTTNCATTNGTAAGGTAAAGGAAAATAGAAGGG
                      ____________________________________________________________
consensus             ACTGNACATGTGGCACCATTCGTCCATCTTNCATTNGTAAGGTAAAGGAAAATAGAAGGG
 
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rJMSF029K12+          ATNCCTTTGGTGATTCCCACACATTCATTGAACGACCTCGCCCCTTGAATTGCACATCAG
                      ____________________________________________________________
consensus             ATNCCTTTGGTGATTCCCACACATTCATTGAACGACCTCGCCCCTTGAATTGCACATCAG
 
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rJMSF029K12+          CGACACACANTGCNCCAACTGGCAGCTCACAGAAATTTCGTGCAACGACGTCCTGTGTTG
                      ____________________________________________________________
consensus             CGACACACANTGCNCCAACTGGCAGCTCACAGAAATTTCGTGCAACGACGTCCTGTGTTG
 
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rJMSF029K12+          AAGGCAATCTAGGAGAGTANACAAGGAACCTCCCGAGGCTTATCGTCAAAAGGGATTTAA
                      ____________________________________________________________
consensus             AAGGCAATCTAGGAGAGTANACAAGGAACCTCCCGAGGCTTATCGTCAAAAGGGATTTAA
 
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rJMSF029K12+          AGTAATCTNTAATGCGAAACCCNTCGTTTCCGAGGCTATCTTCGACCTCCGGATGCAAAA
                      ____________________________________________________________
consensus             AGTAATCTNTAATGCGAAACCCNTCGTTTCCGAGGCTATCTTCGACCTCCGGATGCAAAA
 
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rJMSF029K12+          CAACTTNGAATTGATCGTCCCCAAGGAATTTCATAGCATTGTTATTCTTCAATGACTTGG
                      ____________________________________________________________
consensus             CAACTTNGAATTGATCGTCCCCAAGGAATTTCATAGCATTGTTATTCTTCAATGACTTGG
 
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rJMSF029K12+          CCAATTCNTTCTCAGGTGCAGATTTCCCGCATAACACCAAAAGTGAAGGCGCCGATGATT
                      ____________________________________________________________
consensus             CCAATTCNTTCTCAGGTGCAGATTTCCCGCATAACACCAAAAGTGAAGGCGCCGATGATT
 
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rJMSF029K12+          CTGATTCCATATAGGGTGTAGGGGAAGAAGTGTTGAAAGCCAAGTGNGAAGAAGATGCAA
                      ____________________________________________________________
consensus             CTGATTCCATATAGGGTGTAGGGGAAGAAGTGTTGAAAGCCAAGTGNGAAGAAGATGCAA
 
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rJMSF029K12+          GCTGAGGAAGAGAGCGAAAGCAGGAGGAGGATCGATGGTGAGAGAGTAGAGAGCGGCTAA
                      ____________________________________________________________
consensus             GCTGAGGAAGAGAGCGAAAGCAGGAGGAGGATCGATGGTGAGAGAGTAGAGAGCGGCTAA
 
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rJMSF029K12+          TCAATATCATCAAGCTTTGTATAGTCCGCTTCAGCTCAAGGGAGAGAGTAAATGGTGTCA
JMFF013G05+                                              TCAAGGGAGAGTGTAAATGGTGTCA
                      ____________________________________________________________
consensus             TCAATATCATCAAGCTTTGTATAGTCCGCTTCAGCTCAAGGGAGAGTGTAAATGGTGTCA
 
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rJMSF029K12+          TGTTTTACTCCCATTACTTATTAGCGGGGCGCTCCACTTCGGGCATTGGAATCTCCTTCC
JMFF013G05+           TGTTCTACTGGCATTGCTTATTAGCGGCACGCTCCACTTCGGGCATTGGAATCTCCTTCC
                      ____________________________________________________________
consensus             TGTTTTACTGGCATTGCTTATTAGCGGGGCGCTCCACTTCGGGCATTGGAATCTCCTTCC
 
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rJMSF029K12+          AATNTTTGCGG                                                 
JMFF013G05+           AATTTTTGCGGCTATTGGGTTTGGCGGTGGTCGACGGATGGGAAGTGGCAAATATAATAA
                      ____________________________________________________________
consensus             AATTTTTGCGGCTATTGGGTTTGGCGGTGGTCGACGGATGGGAAGTGGCAAATATAATAA
 
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JMFF013G05+           TTATTTATTATAGTTCTTCTCCGCTGCCTCTTGTTGTTGAGAATTCTCAGGTTTAAACGA
                      ____________________________________________________________
consensus             TTATTTATTATAGTTCTTCTCCGCTGCCTCTTGTTGTTGAGAATTCTCAGGTTTAAACGA
 
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JMFF013G05+           ACGACCTATTAATCAACGAAGAGTCCCCACTTTTCCCAGATCGTAGAAACAATCCTTTAT
                      ____________________________________________________________
consensus             ACGACCTATTAATCAACGAAGAGTCCCCACTTTTCCCAGATCGTAGAAACAATCCTTTAT
 
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JMFF013G05+           TAATTATTAGAGACCCAAGTCTCGTTCAAACGAAGGTTGAAGGACTGACCGCTGACGGAG
                      ____________________________________________________________
consensus             TAATTATTAGAGACCCAAGTCTCGTTCAAACGAAGGTTGAAGGACTGACCGCTGACGGAG
 
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JMFF013G05+           CTGCCGAGCTGTTATGTTGTTCTACTTCCCAGAGACGGTCCGGACAGAGCTGCCGTCCAC
                      ____________________________________________________________
consensus             CTGCCGAGCTGTTATGTTGTTCTACTTCCCAGAGACGGTCCGGACAGAGCTGCCGTCCAC
 
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JMFF013G05+           TCGTCCATCAAGAACGGCCAGAAGTACACCTCGTCTGACGTCTTGTTCAGTTGTTCTTCT
                      ____________________________________________________________
consensus             TCGTCCATCAAGAACGGCCAGAAGTACACCTCGTCTGACGTCTTGTTCAGTTGTTCTTCT
 
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JMFF013G05+           TCCCAGGGACGGTGCTGCCGAGCTGGTGTGACGGACCGACCGCTGACTGGCGACTGGCGA
                      ____________________________________________________________
consensus             TCCCAGGGACGGTGCTGCCGAGCTGGTGTGACGGACCGACCGCTGACTGGCGACTGGCGA
 
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JMFF013G05+           GGCACAGCCGCAGAGGAGAGACCAAGAGAGGACGGAGGCGACAGAGTGCGGCTAGGGAGT
                      ____________________________________________________________
consensus             GGCACAGCCGCAGAGGAGAGACCAAGAGAGGACGGAGGCGACAGAGTGCGGCTAGGGAGT