Contig 007328:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF013D15Sequence531007328 (3)ref|XP_006344389.1|3e-59PREDICTED: aldose 1-epimerase-like [Solanum tuberosum]
JMFF025G14Sequence527007328 (3)ref|XP_009615365.1|4e-83PREDICTED: aldose 1-epimerase [Nicotiana tomentosiformis]800011072 (2)ref|XP_009615365.1|6e-107PREDICTED: aldose 1-epimerase [Nicotiana tomentosiformis]
JMSF003C15Sequence239007328 (3)emb|CAN61059.1|1e-22hypothetical protein VITISV_011619 [Vitis vinifera]789011072 (2)ref|XP_009615365.1|1e-101PREDICTED: aldose 1-epimerase [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMFF025G14+                                                     TATTCCCAGCTTGTTTTT
                      ____________________________________________________________
consensus                                                       TATTCCCAGCTTGTTTTT
 
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JMFF025G14+           GCCAATGAACAGGTAAGTCACAGTAACAGACAGATTCCCAGGAAATCCTTGTTCTCCATC
JMFF013D15+                   ACAGGTAAGTCACAGTAACAGACAGATTCCCAGGAAATCCTTGTTCTCCATC
                      ____________________________________________________________
consensus             GCCAATGAACAGGTAAGTCACAGTAACAGACAGATTCCCAGGAAATCCTTGTTCTCCATC
 
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JMFF025G14+           ATAGCTGTTGTATGAGAGAGTCAGATGGCTGTCTTTCTTGTAATCTTCCACAGTCCATAT
JMFF013D15+           ATAGCTGTTGTATGAGAGAGTCAGATGGCTGTCTTTCTTGTAATCTTCCACAGTCCATAT
                      ____________________________________________________________
consensus             ATAGCTGTTGTATGAGAGAGTCAGATGGCTGTCTTTCTTGTAATCTTCCACAGTCCATAT
 
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JMFF025G14+           CACATCACTGAATCCTTTGATACCCCCATGGAGAGTGTTTCCATGATCATTTGCAGGCAA
JMFF013D15+           CACATCACTGAATCCTTTGATACCCCCATGGAGAGTGTTTCCATGATCATTTGCAGGCAA
                      ____________________________________________________________
consensus             CACATCACTGAATCCTTTGATACCCCCATGGAGAGTGTTTCCATGATCATTTGCAGGCAA
 
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JMFF025G14+           TTTGTACTCCACACCATTAAGCTTGAAGCTTGCTCCCCCAATCCTGTTAGCAACACGCCC
JMFF013D15+           TTTGTACTCCACACCATTAAGCTTGAAGCTTGCTCCCCCAATCCTGTTAGCAACACGCCC
                      ____________________________________________________________
consensus             TTTGTACTCCACACCATTAAGCTTGAAGCTTGCTCCCCCAATCCTGTTAGCAACACGCCC
 
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JMFF025G14+           AACTATAGCACCAAAATAGGCTGTGTCATTCTTGTAGTCATCAACAGAATCGAATCCAAG
JMSF003C15+                                            GTAGTCATCAACAGAATCGAATCCAAG
JMFF013D15+           -ACTATAGCACCAAAATAGGCTGTGTCATTCTTGTAGTCATCAACAGAATCGAATCCAAG
                      ____________________________________________________________
consensus             AACTATAGCACCAAAATAGGCTGTGTCATTCTTGTAGTCATCAACAGAATCGAATCCAAG
 
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JMFF025G14+           AACTACATCTCCCAATTTTCCATTTTTATCAGGGAGGATGACAGAGATAACAGTTGCTCC
JMSF003C15+           AACTACATCTCCCAATTTTCCATTTTTATCAGGGAGGATGACAGAGATAACAGTTGCTCC
JMFF013D15+           AACTACATCTCCCAATTTTCCATTTTTATCAGGGAGGATGACAGAGATAACAGTTGCTCC
                      ____________________________________________________________
consensus             AACTACATCTCCCAATTTTCCATTTTTATCAGGGAGGATGACAGAGATAACAGTTGCTCC
 
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JMFF025G14+           ATAGTTTGTGATCTTCACAGAGAAGCTGCCTCTCTTGATCTCATATATACCCACTTGTTC
JMSF003C15+           ATAGTTTGTGATCTTCACAGAGAAGCTGCCTCTCTTGATCTCATATATACCCACTTGTTC
JMFF013D15+           ATAGTTTGTGATCTTCACAGAGAAGCTGCCTCTCTTGATCTCATATATACCCACTTGTTC
                      ____________________________________________________________
consensus             ATAGTTTGTGATCTTCACAGAGAAGCTGCCTCTCTTGATCTCATATATACCCACTTGTTC
 
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JMFF025G14+           ACTTGCATCACAGAAGCTCCCTGTTAAGAAAACACCCAAAACCAAGAAAGACAACAATCG
JMSF003C15+           ACTTGCATCACAGAAGCTCCCTGTTAAGAAAACACCCAAAACCAAGAAAGACAACAATCG
JMFF013D15+           ACTTGCATCACAGAAGCTCCCTGTTAAGAAAACACCCAAAACCAAGAAAGACAACAATCG
                      ____________________________________________________________
consensus             ACTTGCATCACAGAAGCTCCCTGTTAAGAAAACACCCAAAACCAAGAAAGACAACAATCG
 
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JMFF025G14+           ATATAATGCAGCCATCAATTCAGATCAGC                               
JMSF003C15+           ATATAATGCAGCCATCAATTCAGATCAGC                               
JMFF013D15+           ATATAATGCAGCCATCAATTCAGATCAGCAAATACAATGCACTCCCTTCGATCTCTATAT
                      ____________________________________________________________
consensus             ATATAATGCAGCCATCAATTCAGATCAGCAAATACAATGCACTCCCTTCGATCTCTATAT