Contig 007318:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFF043J07+                                               CAGGAATGCAAAAACCGGCAGCTA
                      ____________________________________________________________
consensus                                                 CAGGAATGCAAAAACCGGCAGCTA
 
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JMFF043J07+           TCGCCGAATTTACAGCTCCCTTGAAGCCAATACGCACAAATNTTCTCCGTNTTCGTCACA
                      ____________________________________________________________
consensus             TCGCCGAATTTACAGCTCCCTTGAAGCCAATACGCACAAATNTTCTCCGTNTTCGTCACA
 
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JMFF043J07+           GCTCTAGCGTTGTTGCCGCCGCCATGAGCCGGCGTTCGACCCCAATTGTTATTAAAATTC
JMFF035L02+                         GCCGCCGCCATGAGCCGGCGTTCGACCCCAATTGTTATTAAAATTC
                      ____________________________________________________________
consensus             GCTCTAGCGTTGTTGCCGCCGCCATGAGCCGGCGTTCGACCCCAATTGTTATTAAAATTC
 
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JMFF043J07+           GTATTCCTCCGCGGCCCGCCCCGGTAATCATCGGAGTAGCCATGAGAGCGCTTCGACGAC
JMFF035L02+           GTATTCCTCCGCGGCCCGCCCCGGTAATCATCGGAGTAGCCATGAGAGCGCTTCGACGAC
JMFF010M07+                          CCGCCCCGGTAATCATCGGAGTAGCCATGAGAGCGCTTNGACGAC
                      ____________________________________________________________
consensus             GTATTCCTCCGCGGCCCGCCCCGGTAATCATCGGAGTAGCCATGAGAGCGCTTCGACGAC
 
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JMFF043J07+           GCCGTACCGTTAGTCAATGAGCCTTGTGCCTGAGGCGGCGGCGCAGCCAGTTCCCTGTGC
JMFF035L02+           GCCGTACCGTTAGTCAATGAGCCTTGTGCCTGAGGCGGCGGCGCAGCCAGTTCCCTGTGC
JMFF010M07+           GCCGTACCGTTAGTCAATGAGCCTTGTGCCTGAGGCGGCGGCGCAGCCAGTTCCCTGTGC
                      ____________________________________________________________
consensus             GCCGTACCGTTAGTCAATGAGCCTTGTGCCTGAGGCGGCGGCGCAGCCAGTTCCCTGTGC
 
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JMFF043J07+           AAGAACGGGCACGGAAATCTATCGCACCGACCAGCTCGCCAATGGAAGCAAACTTTCTGC
JMFF035L02+           AAGAACGGGCACGGAAATCTATCGCACCGACCAGCTCGCCAATGGAAGCAAACTTTCTGC
JMFF010M07+           AAGAACGGGCACGGAAATCTATCGCACCGACCAGCTCGCCAATGGAAGCAAACTTTCTGC
                      ____________________________________________________________
consensus             AAGAACGGGCACGGAAATCTATCGCACCGACCAGCTCGCCAATGGAAGCAAACTTTCTGC
 
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JMFF043J07+           TGCTGTTTACTACTACCGTTATCGCCTTGTGAAGGGCCAAGCCGCCGGAAAATTCGCTTG
JMFF035L02+           TGCTGTTTACTACTACCGTTATCGCCTTGTGAAGGGCCAAGCCGCCGGAAAATTCGCTTG
JMFF048J03+                                                 AAGCCGCCGGAAAATTCGCTTG
JMFF010M07+           TGCTGTTTACTACTACCGTTATCGCCTTGTGAAGGGCCAAGCCGCCGGAAAATTCGCTTG
                      ____________________________________________________________
consensus             TGCTGTTTACTACTACCGTTATCGCCTTGTGAAGGGCCAAGCCGCCGGAAAATTCGCTTG
 
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JMFF043J07+           CTTCCATCAATA-TCCATAGCCCCTAATTAAGGTTTTCTTTGTGATCACTGAATCGCAGA
JMFF035L02+           CTTCCATCAATA-TCCATAGCCCCTAATTAAGGTTTTCTTTGTGATCACTGAATCGCAGA
JMFF048J03+           GTTCCATCAATATTCCATAGCCCCTAATTAAGGTTTTCTTTGTGATCACTGAATCGCAGA
JMFF010M07+           CTTCCATCAATA-TCCATAGCCCCTAATTAAGGTTTTCTTTGTGATCACTGAATCGCAGA
                      ____________________________________________________________
consensus             CTTCCATCAATA-TCCATAGCCCCTAATTAAGGTTTTCTTTGTGATCACTGAATCGCAGA
 
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JMFF043J07+           TCGCGTGAATGGATATAAAATCTGGGTTTGATCATGCGAAGACTCGATTGAGCTAAAGAT
JMFF035L02+           TCGCGTGAATGGATATAAAATCTGGGTTTGATCATGCGAAGACTCGATTGAGCTAAAGAT
JMFF048J03+           TCGCGTGAATGGATATAAAATCTGGGTTTGATCATGCGAAGACTCGATTGAGCTAAAGAT
JMFF010M07+           TCGCGTGAATGGATATAAAATCTGGGTTTGATCATGCGAAGACTCGATTGAGCTAAAGAT
                      ____________________________________________________________
consensus             TCGCGTGAATGGATATAAAATCTGGGTTTGATCATGCGAAGACTCGATTGAGCTAAAGAT
 
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JMFF043J07+           TGAGATTAAAAACCAATTAATTTCAAGAAATCAAAGGATTTTAGGGTTTTCGAGACGATG
JMFF035L02+           TGAGATTAAAAACCAATTAATTTCAAGAAATCAAAGGATTTTAGGGTTTTCGAGACGATG
JMFF048J03+           TGAGATTAAAAACCAATTAATTTCAAGAAATCAAAGGATTTTAGGGTTTTCGAGACGATG
JMFF010M07+           TGAGATTAAAAACCAATTAATTTCAAGAAATCAAAGGATTTTAGGGTTTTCGAGACGATG
                      ____________________________________________________________
consensus             TGAGATTAAAAACCAATTAATTTCAAGAAATCAAAGGATTTTAGGGTTTTCGAGACGATG
 
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JMFF043J07+           AAATTGAAAACCCTCCCCAAATTTCTACTTGCAAGAAAAGCGATAAGAATCCGAGAGGGA
JMFF035L02+           AAATTGAAAACCCTCCCCAAATTTCTACTTGCAAGAAAAGCGATAAGAATCCGAGAGGGA
JMFF048J03+           AAATTGAAAACCCTCCCCAAATTTCTACTTGCAAGAAAAGCGATAAGAATCCGAGAGGGA
JMFF010M07+           AAATTGAAAACCCTCCCCAAATTTCTACTTGCAAGAAAAGCGATAAGAATCCGAGAGGGA
                      ____________________________________________________________
consensus             AAATTGAAAACCCTCCCCAAATTTCTACTTGCAAGAAAAGCGATAAGAATCCGAGAGGGA
 
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JMFF043J07+           AAAACAAGGGT                                                 
JMFF035L02+           AAAACAAGGGTTCCGCCGGAGGTAAGTGGATAATAGCCGGAATTAAT             
JMFF048J03+           AAAACAAGGGTTCCGCCGGATGTAAGTGGATAATAGCCGGAATTAATGATTAAGGGAAAG
JMFF010M07+           AAAACAAGGGTTCCGCCGGAGGTAAGTGGATAATAGCCGGAATTAATGATTAAGGGAAAG
                      ____________________________________________________________
consensus             AAAACAAGGGTTCCGCCGGAGGTAAGTGGATAATAGCCGGAATTAATGATTAAGGGAAAG
 
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JMFF048J03+           GGTGTTCAAAGAGATCTGGTTGATTTAGTACAGAACAGAAAACAGCGTAGAGTTAACGAC
JMFF010M07+           GGTGTTCAAAGAGATCTGGTTGATTTAGTACAGAACAGAAAACAGCGTAGAGTTAACGAC
                      ____________________________________________________________
consensus             GGTGTTCAAAGAGATCTGGTTGATTTAGTACAGAACAGAAAACAGCGTAGAGTTAACGAC