Contig 007313:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN016F01+                                                             TATAATATAA
JMFN036F11+                                                               TAATATAA
                      ____________________________________________________________
consensus                                                               TATAATATAA
 
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JMFN016F01+           TGATATATGTTTTTGAGGAGGGCGCTGAAATGTGCAAATCTAATTAGTTTAATAGCTCAG
JMFN036F11+           TGATATATGTTTTGGAGGAGGGCGCTGAAATGTGCAAATCTAATTAGTTTAATAGCTCAG
                      ____________________________________________________________
consensus             TGATATATGTTTTTGAGGAGGGCGCTGAAATGTGCAAATCTAATTAGTTTAATAGCTCAG
 
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JMFN016F01+           GAGGGATAGACAAGGAAGGAGAAGACGAGTTGGGGAGGGAGGACGAAGATGCTGAGAAAA
JMFN036F11+           GAGGGATAGACAAGGAAGGAGAAGACGAGTTGGGGAGGGAGGACGAAGATGCTGAGAAAA
                      ____________________________________________________________
consensus             GAGGGATAGACAAGGAAGGAGAAGACGAGTTGGGGAGGGAGGACGAAGATGCTGAGAAAA
 
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JMFN016F01+           CCTTGTGCCAGAAAATTTTCGACACAACGTTATTCAGACCACAAAATACAAGAAGAAAAC
JMFN036F11+           CCTTGTGCCAGAAAATTTTCGACACAACGTTATTCAGACCACAAAATACAAGAAGAAAAC
                      ____________________________________________________________
consensus             CCTTGTGCCAGAAAATTTTCGACACAACGTTATTCAGACCACAAAATACAAGAAGAAAAC
 
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JMFN016F01+           ACACAACAATGGGTCTTACAAGGTCAAGAAAAGGTCTTACAAGGTCAAGAAAATTGGGTG
JMFN036F11+           ACACAACAATGGGTCTTACAAGGTCAAGAAAAGGTCTTACAAGGTCAAGAAAATTGGGTG
                      ____________________________________________________________
consensus             ACACAACAATGGGTCTTACAAGGTCAAGAAAAGGTCTTACAAGGTCAAGAAAATTGGGTG
 
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JMFN016F01+           AGAATAAAAAATAAAAGGCAACAAGTCAAAAAAAAAAAAAAAACGAATAAGAAAAGGTGA
JMFN036F11+           AGAATAAAAAATAAAAGGCAACAAGTCAAAAAAAAAAAAAAAACGAATAAGAAAAGGTGA
JMFF010C10+                                       AAAAAAAAAAAAAAACGAATAAGAAAAGGTGA
                      ____________________________________________________________
consensus             AGAATAAAAAATAAAAGGCAACAAGTCAAAAAAAAAAAAAAAACGAATAAGAAAAGGTGA
 
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JMFN016F01+           TGGGGAAAAAGCTCAGGTAGGATAGCACCCAATTAATACAAATGAGCCGCCGTCAAGGTG
JMFN036F11+           TGGGGAAAAAGCTCAGGTAGGATAGCACCCAATTAATACAAATGAGCCGCCGTCAAGGTG
JMFF010C10+           TGGGGAAAAAGCTCAGGTAGGATAGCACCCAATTAATGCAAATGAGCCGCCGTCAAGGTG
                      ____________________________________________________________
consensus             TGGGGAAAAAGCTCAGGTAGGATAGCACCCAATTAATACAAATGAGCCGCCGTCAAGGTG
 
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JMFN016F01+           GAGCTCCCGGCGCCGGCGCCGGGACCCAATTCAAATCTCTGGCGGCCCAAACTTTCAACG
JMFN036F11+           GAGCTCCCGGCGCCGGCGCCGGGACCCAATTCAAATCTCTGGCGGCCCAAACTTTCAACG
JMFF010C10+           GAGCTCCCGGCGCCGGCGCCGGGACCCAATTCAAATCTCTGGCGGCCCAAACTTTCAACG
                      ____________________________________________________________
consensus             GAGCTCCCGGCGCCGGCGCCGGGACCCAATTCAAATCTCTGGCGGCCCAAACTTTCAACG
 
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JMFN016F01+           CCCCAGATTCCATCAGCTTTCCAGTTTTGCGGGCGGATGACAAGTCTTGAACTCATTTTT
JMFN036F11+           CCCCAGATTCCATCAGCTTTCCAGTTTTGCGGGCGGATGACAAGTCTTGAACTCATTTTT
JMFF010C10+           CCCCAGATTCCATCAGCTTTCCAGTTTTGCGGGCGGATGACAAGTCTTGAACTCATTTTT
                      ____________________________________________________________
consensus             CCCCAGATTCCATCAGCTTTCCAGTTTTGCGGGCGGATGACAAGTCTTGAACTCATTTTT
 
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JMFN016F01+           AAGACTGCCTTGCTGTGGAGATTTCAGTCTTGCTTTTTGATCTGCAATATTTTCTCTCAC
JMFN036F11+           AAGACTGCCTTGCTGTGGAGATTTCAGTCTTGCTTTTTGATCTGCAATATTTTCTCTCAC
JMFF010C10+           AAGACTGCCTTGCTGTGGAGATTTCAGTCTTGCTTTTTGATCTGCAATATTTTCTCTCAC
                      ____________________________________________________________
consensus             AAGACTGCCTTGCTGTGGAGATTTCAGTCTTGCTTTTTGATCTGCAATATTTTCTCTCAC
 
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JMFN016F01+           CCCCATAAAAATAAAAATAAAAAAAGAAAAAAGAGGAGAAATTTAGAGAGAGAAGTGAAA
JMFN036F11+           CCCCATAAAAATAAAAATAAAAAAAGAAAAAAGAGGAGAAATTTAGAGAGAGAAGTGAAA
JMFF010C10+           CCCCATAAAAATAAAAATAAAAAAAGAAAAAAGAGGAGAAATTTAGAGAGAGAAGTGAAA
                      ____________________________________________________________
consensus             CCCCATAAAAATAAAAATAAAAAAAGAAAAAAGAGGAGAAATTTAGAGAGAGAAGTGAAA
 
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JMFN016F01+           GCAGAGAGAGAGA                                               
JMFN036F11+           GCAGAGAGAGAGA                                               
JMFF010C10+           GCAGAGAGAGAGAGAGCGATATGAATGGAAATGGATGTATGAGGAGAAGGGATAATGAAT
                      ____________________________________________________________
consensus             GCAGAGAGAGAGAGAGCGATATGAATGGAAATGGATGTATGAGGAGAAGGGATAATGAAT