Contig 007308:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF009D14Sequence586007308 (2)689011154 (5)ref|XP_006385630.1|3e-95hypothetical protein POPTR_0003s08810g, partial [Populus trichocarpa] gb|ERP6342
JMFF012P01Sequence491007308 (2)751011154 (5)ref|XP_009592603.1|2e-109PREDICTED: protein ABCI7, chloroplastic [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF009D14+ GGTGAGGAGGTGGAAGTCAGTGAGTCTTCTAGGGTTTCAGCTATTT
                      ____________________________________________________________
consensus GGTGAGGAGGTGGAAGTCAGTGAGTCTTCTAGGGTTTCAGCTATTT
 
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JMFF009D14+ GTAGAACATGAGGGTCTGAGATGGCTGCAATAGGGGTGAAATTGGGTTTACCAAAAATCC
                      ____________________________________________________________
consensus GTAGAACATGAGGGTCTGAGATGGCTGCAATAGGGGTGAAATTGGGTTTACCAAAAATCC
 
. : . : . : . : . : . :
JMFF009D14+ CAATTTTGGCTCTTCTGGGTTGGGTTATTAGTCTGGGAACTGTGAGCTTATAGAGAGGAG
                      ____________________________________________________________
consensus CAATTTTGGCTCTTCTGGGTTGGGTTATTAGTCTGGGAACTGTGAGCTTATAGAGAGGAG
 
. : . : . : . : . : . :
JMFF009D14+ GGGAAAGAGATACAAAGGTTGAAGCTAATGTGTTTCTGTGCAGGGTTGGAGTCAAAGTGG
                      ____________________________________________________________
consensus GGGAAAGAGATACAAAGGTTGAAGCTAATGTGTTTCTGTGCAGGGTTGGAGTCAAAGTGG
 
. : . : . : . : . : . :
JMFF009D14+ AAAGCTCCATGGATTGGTTGCCTCCGAGGGAGGAGCTAACAAAGAGGGGATGACTTGTGA
                      ____________________________________________________________
consensus AAAGCTCCATGGATTGGTTGCCTCCGAGGGAGGAGCTAACAAAGAGGGGATGACTTGTGA
 
. : . : . : . : . : . :
JMFF012P01+ TGGAGGCTGGTGGAGTGGTGGTTCAG
JMFF009D14+ ATTGTAATCTACTAATCTCCAGTGATCTAGCTGGTGGAGGCTGGTGGAGTGGTGGTTCAG
                      ____________________________________________________________
consensus ATTGTAATCTACTAATCTCCAGTGATCTAGCTGGTGGAGGCTGGTGGAGTGGTGGTTCAG
 
. : . : . : . : . : . :
JMFF012P01+ TAGTTCACTGCCGGAGTTCCGGATTACTGGAGGGCTACGTCGCAGGGACGGGTTGCCGGA
JMFF009D14+ TAGTTCACTGCCGGAGTTCCGGATTACTGGAGGGCTACGTCGCAGGGACGGGTTGCCGGA
                      ____________________________________________________________
consensus TAGTTCACTGCCGGAGTTCCGGATTACTGGAGGGCTACGTCGCAGGGACGGGTTGCCGGA
 
. : . : . : . : . : . :
JMFF012P01+ GACCGGAGGGCTGCGTCGCTGGCTCGCTGCGAGTGGGCCGCGTAACTGGGGTAAACTGGG
JMFF009D14+ GACCGGAGGGCTGCGTCGCTGGCTCGCTGCGAGTGGGCCGCGTAACTGGGGTAAACTGGG
                      ____________________________________________________________
consensus GACCGGAGGGCTGCGTCGCTGGCTCGCTGCGAGTGGGCCGCGTAACTGGGGTAAACTGGG
 
. : . : . : . : . : . :
JMFF012P01+ TTGCTCTCGTCTCTGCTCCGGCGGCTCCGCCTGCCTACTCGCCTGCTCGGAGAGTCGGAG
JMFF009D14+ TTGCTCTCGTCTCTGCTCCGGCGGCTCCGCCTGCCTACTCGCCTGCTCGGAGAGTCGGAG
                      ____________________________________________________________
consensus TTGCTCTCGTCTCTGCTCCGGCGGCTCCGCCTGCCTACTCGCCTGCTCGGAGAGTCGGAG
 
. : . : . : . : . : . :
JMFF012P01+ TGTTGTCGCTGGGTAGAAGAGACGAAGAGTGAATGAGTGATTAGGATTTACGCAATCGGC
JMFF009D14+ TGTTGTCGCTGGGTAGAAGAGACGAAGAGTGAATGAGTGATTAGGATTTACGCAATCGGC
                      ____________________________________________________________
consensus TGTTGTCGCTGGGTAGAAGAGACGAAGAGTGAATGAGTGATTAGGATTTACGCAATCGGC