Contig 007307:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF009D03Sequence545007307 (3)ref|XP_004239332.1|108PREDICTED: uncharacterized protein LOC101267991 [Solanum lycopersicum]750002562 (3)ref|XP_006338180.1|150PREDICTED: uncharacterized protein LOC102600519 [Solanum tuberosum]
JMFF016N10Sequence605007307 (3)ref|XP_004239332.1|148PREDICTED: uncharacterized protein LOC101267991 [Solanum lycopersicum]794002562 (3)ref|XP_006338180.1|171PREDICTED: uncharacterized protein LOC102600519 [Solanum tuberosum]
JMSF012B07Sequence420007307 (3)ref|XP_004239332.1|102PREDICTED: uncharacterized protein LOC101267991 [Solanum lycopersicum]764002562 (3)ref|XP_006338180.1|261PREDICTED: uncharacterized protein LOC102600519 [Solanum tuberosum]

Alignment

This contig is upended


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JMFF016N10+                                                          CTGTGAAGCAGTC
                      ____________________________________________________________
consensus                                                            CTGTGAAGCAGTC
 
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JMFF016N10+           ACAGCTGAAAATGCTCGTCCAAAGTAATCCGCAAATCTCATCAACTGTATATCTTGTTGT
JMFF009D03+                                                                  GTTGT
                      ____________________________________________________________
consensus             ACAGCTGAAAATGCTCGTCCAAAGTAATCCGCAAATCTCATCAACTGTATATCTTGTTGT
 
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JMFF016N10+           GATTCAAAAGTCGCAGAAACGTCAGCAAGGAAAACCGATAGATCATCGGCATCTATCTTG
JMFF009D03+           GATTCAAAAGTCGCAGAAACGTCAGCAAGGAAAACCGATAGATCATCGGCATCTATCTTG
                      ____________________________________________________________
consensus             GATTCAAAAGTCGCAGAAACGTCAGCAAGGAAAACCGATAGATCATCGGCATCTATCTTG
 
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JMFF016N10+           GCGGCGGCTTCAGCCACAGTGACCTTCGGCTTCTTCTGCTTCTCCTTCTTCTTCTCATCC
JMSF012B07+                    TCAGCCACAGTGACCTTCGGCTTCTTCTGCTTCTCCTTCTTCTTCTCATCC
JMFF009D03+           GCGGCGGCTTCAGCCACAGTGACCTTCGGCTTCTTCTGCTTCTCCTTCTTCTTCTCATCC
                      ____________________________________________________________
consensus             GCGGCGGCTTCAGCCACAGTGACCTTCGGCTTCTTCTGCTTCTCCTTCTTCTTCTCATCC
 
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JMFF016N10+           GCAGCTCCATTCTGCATGGCTCCGCCTTCCAAATCGCTATCCTCGTCATCGGAACGATTC
JMSF012B07+           GCAGCTCCATTCTGCATGGCTCCGCCTTCCAAATCGCTATCCTCGTCATCGGAACGATTC
JMFF009D03+           GCAGCTCCATTCTGCATGGCTCCGCCTTCCAAATCGCTATCCTCGTCATCGGAACGATTC
                      ____________________________________________________________
consensus             GCAGCTCCATTCTGCATGGCTCCGCCTTCCAAATCGCTATCCTCGTCATCGGAACGATTC
 
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JMFF016N10+           CTCGTGGCTGATCTCACAGGAGCATCGTCGTTAGCATTCATCGCGGCATAATGAGCTTCA
JMSF012B07+           CTCGTGGCTGATCTCACAGGAGCATCGTCGTTAGCATTCATCGCGGCATAATGAGCTTCA
JMFF009D03+           CTCGTGGCTGATCTCACAGGAGCATCGTCGTTAGCATTCATCGCGGCATAATGAGCTTCA
                      ____________________________________________________________
consensus             CTCGTGGCTGATCTCACAGGAGCATCGTCGTTAGCATTCATCGCGGCATAATGAGCTTCA
 
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JMFF016N10+           ATTTTGCGGCGCCGCTCCTCGGCATGCTTCTCCAGCGACCCGAACACATTGTCCGCGCCG
JMSF012B07+           ATTTTGCGGCGCCGCTCCTCGGCATGCTTCTCCAGCGACCCGAACACATTGTCCGCGCCG
JMFF009D03+           ATTTTGCGGCGCCGCTCCTCGGCATGCTTCTCCAGCGACCCGAACACATTGTCCGCGCCG
                      ____________________________________________________________
consensus             ATTTTGCGGCGCCGCTCCTCGGCATGCTTCTCCAGCGACCCGAACACATTGTCCGCGCCG
 
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JMFF016N10+           GATGCGCCGGATCCATTGGTGACCGTGATCCTCGAGGAATCCGTCGACGGTTTCTGCTGA
JMSF012B07+           GATGCGCCGGATCCATTGGTGACCGTGATCCTCGAGGAATCCGTCGACGGTTTCTGCTGA
JMFF009D03+           GATGCGCCGGATCCATTGGTGACCGTGATCCTCGAGGAATCCGTCGACGGTTTCTGCTGA
                      ____________________________________________________________
consensus             GATGCGCCGGATCCATTGGTGACCGTGATCCTCGAGGAATCCGTCGACGGTTTCTGCTGA
 
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JMFF016N10+           TTCTTCTTCTGCTTCTTTGCATACGACACCTTTTTCCATCCATGGTCGCTGTTACTGACT
JMSF012B07+           TTCTTCTTCTGCTTCTTTGCATACGACACCTTTTTCCATCCATGGTCGCTGTTACTGACT
JMFF009D03+           TTCTTCTTCTGCTTCTTTGCATACGACACCTTTTTCCATCCATGGTCGCTGTTACTGACT
                      ____________________________________________________________
consensus             TTCTTCTTCTGCTTCTTTGCATACGACACCTTTTTCCATCCATGGTCGCTGTTACTGACT
 
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JMFF016N10+           TCGATGCCGAAGACTTCGAGAGGCATGGATTTCTCTTCCATTTTCAGAGGGGATCGAAGA
JMSF012B07+           TCGATGCCGAAGACTTCGAGAGGCATGGATTTCTCTTCCATTTTCAGAGGGGATCGAAGA
JMFF009D03+           TCGATGCCGAAGACTTCGAGAGGCATGGATTTCTCTTCCATTTTCAGAGGGGATCGAAGA
                      ____________________________________________________________
consensus             TCGATGCCGAAGACTTCGAGAGGCATGGATTTCTCTTCCATTTTCAGAGGGGATCGAAGA
 
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JMFF016N10+           CAAACTTTGGGGAAAGAGATCGCAGAAAACGGGAAGTGAAGGACAGGAAAGT        
JMSF012B07+           CAAACTTT                                                    
JMFF009D03+           CAAACTTTGGGGAAAGAGATCGCAGAAAACGGGAAGTGAAGGACAGGAAAGTGGAGAAAG
                      ____________________________________________________________
consensus             CAAACTTTGGGGAAAGAGATCGCAGAAAACGGGAAGTGAAGGACAGGAAAGTGGAGAAAG