| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF009C14 | Sequence | 551 | 007306 (8) | ref|XP_010534586.1| | 1e-52 | PREDICTED: protein yippee-like isoform X2 [Tarenaya hassleriana] ref|XP_01053459 | 613 | 007306 (8) | emb|CDP14033.1| | 3e-75 | unnamed protein product [Coffea canephora] |
| JMFF016C19 | Sequence | 489 | 007306 (8) | emb|CDP14033.1| | 1e-69 | unnamed protein product [Coffea canephora] | 323 | 007306 (8) | ref|XP_006435716.1| | 2e-26 | hypothetical protein CICLE_v10033070mg [Citrus clementina] gb|ESR48956.1| hypoth |
| JMFF032P14 | Sequence | 558 | 007306 (8) | ref|XP_010534586.1| | 1e-56 | PREDICTED: protein yippee-like isoform X2 [Tarenaya hassleriana] ref|XP_01053459 | 732 | 007306 (8) | emb|CDP14033.1| | 2e-75 | unnamed protein product [Coffea canephora] |
| JMFN025F13 | Sequence | 529 | 007306 (8) | emb|CDP14033.1| | 5e-74 | unnamed protein product [Coffea canephora] | |||||
| JMFN038D11 | Sequence | 634 | 007306 (8) | emb|CDP14033.1| | 6e-76 | unnamed protein product [Coffea canephora] | |||||
This contig is upended
. : . : . : . : . : . :
rJMFF016C19- TGATA
____________________________________________________________
consensus TGATA
. : . : . : . : . : . :
rJMFF016C19- CTTAGCNAGCTATAGAAGGTGTCNAATGACTAAATTTATCANTTTCACAATCCAAAAGTT
JMFN025F13+ AATGACTAAATTTATCAGTTTCAGAATCCAAAAGTT
____________________________________________________________
consensus CTTAGCNAGCTATAGAAGGTGTCNAATGACTAAATTTATCAGTTTCAGAATCCAAAAGTT
. : . : . : . : . : . :
rJMFF016C19- CAACAAGAACAATGGGGGAGATTGGAGAATGTACATGTGGTTATGAAATTGNATCCGAAA
JMFN025F13+ CAACAAGAACAATGGGGGAGATTGGAGAATGTACATGTGGTTATGAAATTGGATCCGAAA
JMFF016C19+ TTGGAGAATGTACATGTGGTTATGAAATTGGATCCGAAA
JMFN038D11+ ACATGTGGTTATGAAATTGGATCCGAAA
____________________________________________________________
consensus CAACAAGAACAATGGGGGAGATTGGAGAATGTACATGTGGTTATGAAATTGGATCCGAAA
. : . : . : . : . : . :
rJMFF016C19- TGGTGATTAANCATCATCTGCATCGCTTCCTGCGACGCGCGCTTCATGGTTGATCCAGTA
JMFN025F13+ TGGTGATTAAACATCATGTGCATCGCTTCCTGCGACGCGCGCTTCATGGTTGATCCAGTA
JMFF016C19+ TGGTGATTAAACATCATCTGCATCGCTTCNTGCGACGCGCGCTTCATGGTTGATCCAGTA
rJMFF032P14- TCCAGTA
rJMFF009C14- TCCAGTA
JMFN038D11+ TGGTGATTAAACATCATCTGCATCGCTTCCTGCGACGCGCGCTTCATGGTTGATCCAGTA
____________________________________________________________
consensus TGGTGATTAAACATCATCTGCATCGCTTCCTGCGACGCGCGCTTCATGGTTGATCCAGTA
. : . : . : . : . : . :
rJMFF016C19- GTTGTTTCCATCCGGACCGGAAATCTTAAACCTCTCAAGGACTGATCTCCCTTCTNTGTA
JMFN025F13+ GTTGTTTCCATCCGGACCGGAAATCTTAAACCTCTCAAGGACTGATCTCCCTTCTTTGTA
JMFF016C19+ GTTGTTTCCATCCGGACCGGAAATCTTAAACCTCTCAAGGACTGATCTCCCTTCTTTGTA
rJMFF032P14- GTTGTTTCCATCCGGACCGGAAATCTTAAACCTCTCAAGGACTGATCTCCCTTCTTTGTA
rJMFF009C14- GTTGTTTCCATCCGGACCGGAAATCTTAAACCTCTCAAGGACTGATCTCCCTTCTTTGTA
JMFN038D11+ GTTGTTTCCATCCGGACCGGAAATCTTAAACCTCTCAAGGACTGATCTCCCTTCTTTGTA
JMFF032P14+ TCTCAAGGACTGATCTCCCTTCTTTGTA
JMFF009C14+ CCTTCTTTGTA
____________________________________________________________
consensus GTTGTTTCCATCCGGACCGGAAATCTTAAACCTCTCAAGGACTGATCTCCCTTCTTTGTA
. : . : . : . : . : . :
rJMFF016C19- CTTCTGATCCTTCTCATAAGCANNTACATATTTCCAGCCAANGATTGACCCACAACGGAC
JMFN025F13+ CTTCTGATCCTTCTCATAAGCAGTTTCATATTTCCAGCCAACGATTGACCCACAACGGAC
JMFF016C19+ CTTCTGATCCTTCTCATAAGCAGTTTCATATTTCCAGCCAACGATTGACCCACAACGGAC
rJMFF032P14- CTTCTGATCCTTCTCATAAGCAGTTTCATATTTCCAGCCAACGATTGACCCACAACGGAC
rJMFF009C14- CTTCTGATCCTTCTCATAAGCAGTTTCATATTTCCAGCCAACGATTGACCCACAACGGAC
JMFN038D11+ CTTCTGATCCTTCTCATAAGCAGTTTCATATTTCCAGCCAACGATTGACCCACAACGGAC
JMFF032P14+ CTTCTGATCCTTCTCATAAGCAGTTTCATATTTCCAGCCAACGATTGACCCACAACGGAC
JMFF009C14+ CTTCTGATCCTTCTCATAAGCAGTTTCATATTTCCAGCCAACGATTGACCCACAACGGAC
____________________________________________________________
consensus CTTCTGATCCTTCTCATAAGCAGTTTCATATTTCCAGCCAACGATTGACCCACAACGGAC
. : . : . : . : . : . :
rJMFF016C19- ACANAAAATGTCTGCAAC
JMFN025F13+ ACAGAAAATGTCTGCAACAGTGTGCAAGCCAGTCGTCATCATTCTATCTTCGTTCTTCCC
JMFF016C19+ ACAGAAAATGTCTGCAACAGTGTGCAAGCCAGTCGTCATCATTCTATCTTCGTTCTTCCC
rJMFF032P14- ACAGAAAATGTCTGCAACAGTGTGCAAGCCAGTCGTCATCATTCTATCTTCGTTCTTCCC
rJMFF009C14- ACAGAAAATGTCTGCAACAGTGTGCAAGCCAGTCGTCATCATTCTATCTTCGTTCTTCCC
JMFN038D11+ ACAGAAAATGTCTGCAACAGTGTGCAAGCCAGTCGTCATCATTCTATCTTCGTTCTTCCC
JMFF032P14+ ACAGAAAATGTCTGCAACAGTGTGCAAGCCAGTCGTCATCATTCTATCTTCGTTCTTCCC
JMFF009C14+ ACAGAAAATGTCTGCAACAGTGTGCAAGCCAGTCGTCATCATTCTATCTTCGTTCTTCCC
____________________________________________________________
consensus ACAGAAAATGTCTGCAACAGTGTGCAAGCCAGTCGTCATCATTCTATCTTCGTTCTTCCC
. : . : . : . : . : . :
JMFN025F13+ AGATGTAACATTCACTACCTTATTGAAGAGGTAAGCCTTCCCATGTCTGCACTGAAAAGC
JMFF016C19+ AGATGTAACATTCACTACCTTATTGAAGAGGTAAGCCTTCCCATGTCTGCACTGAAAAGC
rJMFF032P14- AGATGTAACATTCACTACCTTATTGAAGAGGTAAGCCTTCCCATGTCTGCACTGAAAAGC
rJMFF009C14- AGATGTAACATTCACTACCTTATTGAAGAGGTAAGCCTTCCCATGTCTGCACTGAAAAGC
JMFN038D11+ AGATGTAACATTCACTACCTTATTGAAGAGGTAAGCCTTCCCATGTCTGCACTGAAAAGC
JMFF032P14+ AGATGTAACATTCACTACCTTATTGAAGAGGTAAGCCTTCCCATGTCTGCACTGAAAAGC
JMFF009C14+ AGATGTAACATTCACTACCTTATTGAAGAGGTAAGCCTTCCCATGTCTGCACTGAAAAGC
____________________________________________________________
consensus AGATGTAACATTCACTACCTTATTGAAGAGGTAAGCCTTCCCATGTCTGCACTGAAAAGC
. : . : . : . : . : . :
JMFN025F13+ CTTGGAGAGTATATCCTCAGAAACAGCAAGATGAGTTCCACAGTGCTTGCAGCTATAGAC
JMFF016C19+ CTTGGAGAGTATATCCTCAGAAACAGCAAGATGAGTTCCACAGTGCTTGCAGCTATAGAC
rJMFF032P14- CTTGGAGAGTATATCCTCAGAAACAGCAAGATGAGTTCCACAGTGCTTGCAGCTATAGAC
rJMFF009C14- CTTGGAGAGTATATCCTCAGAAACAGCAAGATGAGTTCCACAGTGCTTGCAGCTATAGAC
JMFN038D11+ CTTGGAGAGTATATCCTCAGAAACAGCAAGATGAGTTCCACAGTGCTTGCAGCTATAGAC
JMFF032P14+ CTTGGAGAGTATATCCTCAGAAACAGCAAGATGAGTTCCACAGTGCTTGCAGCTATAGAC
JMFF009C14+ CTTGGAGAGTATATCCTCAGAAACAGCAAGATGAGTTCCACAGTGCTTGCAGCTATAGAC
____________________________________________________________
consensus CTTGGAGAGTATATCCTCAGAAACAGCAAGATGAGTTCCACAGTGCTTGCAGCTATAGAC
. : . : . : . : . : . :
JMFN025F13+ TTTGCCCTCGAGATTCACCACAAACAGCCTCCCCATCTCCTTCT
JMFF016C19+ TTTGCCCTCGAGATTCACCACAAACAGCCTCCCCATCTCCTTCTGTCTCTCTT
rJMFF032P14- TTTGCCCTCGAGATTCACCACAAACAGCCTCCCCATCTCCTTCTGTCTCTCTTGAACAGC
rJMFF009C14- TTTGCCCTCGAGATTCACCACAAACAGCCTCCCCATCTCCTTCTGTCTCTCTTGAACAGC
JMFN038D11+ TTTGCCCTCGAGATTCACCACAAACAGCCTCCCCATCTCCTTCTGTCTCTCTTGAACAGC
JMFF032P14+ TTTGCCCTCGAGATTCACCACAAACAGCCTCCCCATCTCCTTCTGTCTCTCTTGAACAGC
JMFF009C14+ TTTGCCCTCGAGATTCACCACAAACAGCCTCCCCATCTCCTTCTGTCTCTCTTGAACAGC
____________________________________________________________
consensus TTTGCCCTCGAGATTCACCACAAACAGCCTCCCCATCTCCTTCTGTCTCTCTTGAACAGC
. : . : . : . : . : . :
rJMFF032P14- AAAAAGGGCCGGAGAAATGCGAAATTGGAGAAAAATCAGTGAAGAAAAAGAAGACTTACG
rJMFF009C14- A
JMFN038D11+ AAAAAGGGCCGGAGAAATGCGAAATTGGAGAAAAATCAGTGAAGAAAAAGAAGACTTACG
JMFF032P14+ AAAAAGGGCCGGAGAAATGCGAAATTGGAGAAAAATCAGTGAAGAAAAAGAAGACTTACG
JMFF009C14+ AAAAAGGGCCGGAGAAATGCGAAATTGGAGAAAAATCAGTGAAGAAAAAGAAGACTTACG
____________________________________________________________
consensus AAAAAGGGCCGGAGAAATGCGAAATTGGAGAAAAATCAGTGAAGAAAAAGAAGACTTACG
. : . : . : . : . : . :
rJMFF032P14- AATCACACATGTAGGCTTTTGGTGAGTTTGATTGATCGTCAGTGCATTGAANGCGCAGAA
JMFN038D11+ AATCACACATGTAGGCTTTTGGTGAGTTTGATTGATCGTCAGTGCATTGAAGGCGCAGAA
JMFF032P14+ AATCACACATGTAGGCTTTTGGTGAGTTTGATTGATCGTCAGTGCATTGAAGGCGCAGAA
JMFF009C14+ AATCACACATGTAGGCTTTTGGTGAGTTTGATTGATCGTCAGTGCATTGAAGGCGCAGAA
____________________________________________________________
consensus AATCACACATGTAGGCTTTTGGTGAGTTTGATTGATCGTCAGTGCATTGAAGGCGCAGAA
. : . : . : . : . : . :
rJMFF032P14- GCGGACGANAGAAAAGTCCAAATCGGAAAA
JMFN038D11+ GCGGACGAGAGAAAAGTCCAAATCGGAAAAGAAGAAGAAGAAAAGTGGCAATGAAATTGG
JMFF032P14+ GCGGACGAGAGAAAAGTCCAAATCGGAAAAGAAGAAGAAGAAAAGTGGCAATGAAATTGG
JMFF009C14+ GCGGACGAGAGAAAAGTCCAAATCGGAAAAGAAGAAGAAGAAAAGTGGCAATGAAATTGG
____________________________________________________________
consensus GCGGACGAGAGAAAAGTCCAAATCGGAAAAGAAGAAGAAGAAAAGTGGCAATGAAATTGG
. : . : . : . : . : . :
JMFN038D11+ GATGAA
JMFF032P14+ GATGAAGATTGAAGAGGGAGCAGTAGAGTTACCTTTCAAGTACCGCAACC
JMFF009C14+ GATGAAGATTGAAGAGGGAGCAGTAGAGTTACCTTTCAAGTACCGCAACCGTTCGCCTCC
____________________________________________________________
consensus GATGAAGATTGAAGAGGGAGCAGTAGAGTTACCTTTCAAGTACCGCAACCGTTCGCCTCC