| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF006H24 | Sequence | 548 | 007302 (11) | emb|CDP14057.1| | 5e-77 | unnamed protein product [Coffea canephora] | 559 | 007302 (11) | |||
| JMFF007M10 | Sequence | 624 | 007302 (11) | emb|CDP14057.1| | 3e-80 | unnamed protein product [Coffea canephora] | 739 | 007302 (11) | |||
| JMSF012I11 | Sequence | 480 | 007302 (11) | emb|CDP14057.1| | 4e-73 | unnamed protein product [Coffea canephora] | 777 | 007302 (11) | emb|CDP14057.1| | 1e-14 | unnamed protein product [Coffea canephora] |
| JMSF021J19 | Sequence | 379 | 007302 (11) | emb|CDP14057.1| | 2e-54 | unnamed protein product [Coffea canephora] | 760 | 007302 (11) | |||
| JMSF026F19 | Sequence | 712 | 007302 (11) | emb|CDP14057.1| | 2e-77 | unnamed protein product [Coffea canephora] | 709 | 007302 (11) | |||
| JMSF049A11 | Sequence | 481 | 007302 (11) | emb|CDP14057.1| | 2e-69 | unnamed protein product [Coffea canephora] | 627 | 008661 (5) | emb|CDP11250.1| | 1e-74 | unnamed protein product [Coffea canephora] |
This contig is upended
. : . : . : . : . : . :
rJMFF007M10- ATAAATAAGGTGAACAAAGTGTATACTAGATGCCAGTATGACACAACTGTCTA
rJMSF026F19- AAGTGTATACTAGATGCCAGTATGACACAACTGTCTA
rJMSF021J19- AAGTGTATACTAGATGCCAGTATGACACAACTGTCTA
____________________________________________________________
consensus ATAAATAAGGTGAACAAAGTGTATACTAGATGCCAGTATGACACAACTGTCTA
. : . : . : . : . : . :
rJMFF007M10- TCGTCGTGTAGTCCTGCAGCTAATGTCTAAGTAGTAAAACAAAACCAGAAAGAGCAATGA
rJMSF026F19- TCGTCGTGTAGTCCTGCAGCTAATGTCTAAGTAGTAAAACAAAACCAGAAAGAGCAATGA
rJMSF021J19- TCGTCGTGTAGTCCTGCAGCTAATGTCTAAGTAGTAAAACAAAACCAGAAAGAGCAATGA
____________________________________________________________
consensus TCGTCGTGTAGTCCTGCAGCTAATGTCTAAGTAGTAAAACAAAACCAGAAAGAGCAATGA
. : . : . : . : . : . :
rJMFF007M10- GTATATGGAACATTTATTCCCAAAAGGGGAGGAGCGATTGATAAGCTCACATTAAACAAC
rJMSF026F19- GTATATGGAACATTTATTCCCAAAAGGGGAGGAGCGATTGATAAGCTCACATTAAACAAC
rJMSF021J19- GTATATGGAACATTTATTCCCAAAAGGGGAGGAGCGATTGATAAGCTCACATTAAACAAC
____________________________________________________________
consensus GTATATGGAACATTTATTCCCAAAAGGGGAGGAGCGATTGATAAGCTCACATTAAACAAC
. : . : . : . : . : . :
rJMFF007M10- CCAGATGATCATATAAGCCGAAAAGAGTTAAGACAAGCAAGTTATATATACATATTCACG
rJMSF026F19- CCAGATGATCATATAAGCCGAAAAGAGTTAAGACAAGCAAGTTATATATACATATTCACG
rJMFF006H24- GACAAGCAAGTTATATATACATATTCACG
rJMSF021J19- CCAGATGATCATATAAGCCGAAAAGAGTTAAGACAAGCAAGTTATATATACATATTCACG
rJMSF012I11- AGACAAGCAAGTTATATATACATATTCACG
____________________________________________________________
consensus CCAGATGATCATATAAGCCGAAAAGAGTTAAGACAAGCAAGTTATATATACATATTCACG
. : . : . : . : . : . :
rJMFF007M10- CAAATGGCCAAACCATAAAACAAACCATAGAGCATACCCAGTGAGGTATACCATACA-GT
rJMSF026F19- CAAATGGCCAAACCATAAAACAAACCATAGAGCATACCCAGTGAGGTATACCATACA-GT
rJMFF006H24- CAAATGGCCAAACCATAGNACAAACCATAGAGCATACCCAGTGAGGTATACCATACAGGT
rJMSF021J19- CAAATGGCCAAACCATAAAACAAACCATAGAGCATACCCAGTGAGGTATACCATACA-GT
rJMSF012I11- CAAATGGCCAAACCATAAAACAAACCATAGAGCATACCCAGTGAGGTATACCATACA-GT
____________________________________________________________
consensus CAAATGGCCAAACCATAAAACAAACCATAGAGCATACCCAGTGAGGTATACCATACA-GT
. : . : . : . : . : . :
rJMFF007M10- AAGACCTTTTTGGCAGCAAGAATACTAGTAATCAACATGGTAGTCACTGTAATTATCCCT
rJMSF026F19- AAGACCTTTTTGGCAGCAAGAATACTAGTAATCAACATGGTAGTCACTGTAATTATCCCT
rJMFF006H24- AAGACCTTTTTGGCAACANNAATACTAGTAATCAACATGGTAGTCACTGTAATTATCCCT
rJMSF021J19- AAGACCTTTTTGGCAGCAAGAATACTAGTAATCAACATGGTAGTCACTGTAATTATCCCT
rJMSF012I11- AAGACCTTTTTGGCAGCAAGAATACTAGTAATCAACATGGTAGTCACTGTAATTATCCCT
____________________________________________________________
consensus AAGACCTTTTTGGCAGCAAGAATACTAGTAATCAACATGGTAGTCACTGTAATTATCCCT
. : . : . : . : . : . :
rJMFF007M10- TCCAGAAATGTCACGCTCAACTCTCTCTGCAATCTTCTCTTCCTCATATTTCAAACCCTC
rJMSF026F19- TCCAGAAATGTCACGCTCAACTCTCTCTGCAATCTTCTCTTCCTCATATTTCAAACCCTC
rJMFF006H24- TCCATAAATGTCACGCTCAACTCTCTCTGCAATCTTCTCTTCCTCATATTTCAAACCCTC
rJMSF021J19- TCCAGAAATGTCACGCTCAACTCTCTCTGCAATCTTCTCTTCCTCATATTTCAAACCCTC
rJMSF012I11- TCCAGAAATGTCACGCTCAACTCTCTCTGCAATCTTCTCTTCCTCATATTTCAAACCCTC
____________________________________________________________
consensus TCCAGAAATGTCACGCTCAACTCTCTCTGCAATCTTCTCTTCCTCATATTTCAAACCCTC
. : . : . : . : . : . :
rJMFF007M10- CTCCAATGCCAGCCCTCCTAGGGCTCCTGCCACAGCTCCAACTGCCAATCCAGTTCCTAA
rJMSF026F19- CTCCAATGCCAGCCCTCCTAGGGCTCCTGCCACAGCTCCAACTGCCAATCCAGTTCCTAA
rJMFF006H24- CTCCAATGCCANCCCTCCTANGGCTCCTGCCACNGCTCCANCTGCCAATCCAGTTCCTAA
rJMSF021J19- CTCCAATGCCAGCCCTCCTAGGGCTCCTGCCACAGCTCCAACTGCCAATCCAGTTCCTAA
rJMSF012I11- CTCCAATGCCAGCCCTCCTAGGGCTCCTGCCACAGCTCCAACTGCCAATCCAGTTCCTAA
____________________________________________________________
consensus CTCCAATGCCAGCCCTCCTAGGGCTCCTGCCACAGCTCCAACTGCCAATCCAGTTCCTAA
. : . : . : . : . : . :
rJMFF007M10- TCCCATCTTTCCACTACGCTTGTTATCATACGGTGCATAATCCAACCGGCGCACTAGGCC
rJMSF026F19- TCCCATCTTTCCACTACGCTTGTTATCATACGGTGCATAATCC-ACCGGCGCACTAGGCC
rJMFF006H24- TCCCATCTTTCCACTACNCTTGTTATCATACGGNGCATAATCC-ACCGGCGCACTANGCC
rJMSF021J19- TCCCATCTTTCCACTACGCTTGTTATCATACGGTGCATAATCC-ACCGGCGCACTAGGCC
rJMSF012I11- TCCCATCTTTCCACTACGCTTGTTATCATACGGTGCATAATCC-ACCGGCGCACTAGGCC
____________________________________________________________
consensus TCCCATCTTTCCACTACGCTTGTTATCATACGGTGCATAATCC-ACCGGCGCACTAGGCC
. : . : . : . : . : . :
rJMFF007M10- CCGGCCTGCCAAAGCTGGGTTGTCGGTCAGGGAACGGCCGTGGCGGATAAGGAGGCTGAG
rJMSF026F19- CCGGCCTGCCAAAGCTGGGTTGTCGGTCAGGGAACGGCCGTGGCGGATAAGGAGGCTGAG
rJMFF006H24- CCGGCCTGCCANAGCTGGGTTGTCGGTCAGGGAACGGCCGTGGCNGATAANGAGGCTGAN
rJMSF021J19- CCGGCCTGCCAAAGCTGGGTTGTCGGTCAGGGAACGGCCGTGGCGGATAAGGAGGCTGAG
rJMSF012I11- CCGGCCTGCCAAAGCTGGGTTGTCGGTCAGGGAACGGCCGTGGCGGATAAGGAGGCTGAG
____________________________________________________________
consensus CCGGCCTGCCAAAGCTGGGTTGTCGGTCAGGGAACGGCCGTGGCGGATAAGGAGGCTGAG
. : . : . : . : . : . :
rJMFF007M10- CGTAGTAACCGGGGTAGTAGCTAGAGTATGGATCAGAGTATCCGCCGTATTGATAAGGAT
rJMSF026F19- CGTAGTAACCGGGGTAGTAGCTAGAGTATGGATCAGAGTATCCGCCGTATTGATAAGGAT
rJMFF006H24- CGTAATAACCGGGGTAGTAGCTAGAGTATGGATCAGAGTATCCGCCGTATTGATAACGAT
rJMSF021J19- CGTAGTAACCGGGGTAGTAGCTAGAGTATGGATCAGAGTATCCGCCGTATTGATAAGGAT
rJMSF012I11- CGTAGTAACCGGGGTAGTAGCTAGAGTATGGATCAGAGTATCCGCCGTATTGATAAGGAT
JMSF026F19+ GGGTAGTAGCTAGAGTATGGATCAGAGTATCCGCCGTATTGATAAGGAT
____________________________________________________________
consensus CGTAGTAACCGGGGTAGTAGCTAGAGTATGGATCAGAGTATCCGCCGTATTGATAAGGAT
. : . : . : . : . : . :
rJMFF007M10- GCGAGTGGGGGANGGAAGGTGGAGGTGATAAAGTCGGATGAGGCGGCGGCACCAGCGCGG
rJMSF026F19- GCGAGTGGGG---AGGAGGTGGAGGTGATAGAGTCGGATGAGGCGGCGGCACCAGCGCGG
rJMFF006H24- GCNANTGGGG---AGGAGGTGGAGGNGANAGAGTCGGATGANGNGGCGGNACCAGCGCGG
rJMSF021J19- GCGAGTGGGG---AGGAGGTGGAGGTGATAGAGTCGGATGAGGCGGCGGCACCAGCGCGG
rJMSF012I11- GCGAGTGGGG---AGGAGGTGGAGGTGATAGAGTCGGATGAGGCGGCGGCACCAGCGCGG
JMSF026F19+ GCGAGTGGGG---AGGAGGTGGAGGTGATAGAGTCGGATGAGGCGGCGGCACCAGCGCGG
JMFF007M10+ GATGAGGCGGCGGCACCAGCGCGG
____________________________________________________________
consensus GCGAGTGGGG---AGGAGGTGGAGGTGATAGAGTCGGATGAGGCGGCGGCACCAGCGCGG
. : . : . : . : . : . :
rJMFF007M10- GAGATGGGGGCTGGTGTGGGTTGTACG
rJMSF026F19- GAGATGGGGGCTGGTGT
rJMFF006H24- GAGATGGGGGCTGNTGTGGGTTGTACGGAGGGATATTGTATCCTCNGTAATCAC
rJMSF021J19- GAGATGGGGGCTGGTGTGGGTTGTACGGAGGGATATTGTATCCTCGGTAATCACGGGAAG
rJMSF012I11- GAGATGGGGGCTGGTGTGGGTTGTACGGAGGGATATTGTATCCTCGGTAATCACGGGAAG
JMSF026F19+ GAGATGGGGGCTGGTGTGGGTTGTACGGAGGGATATTGTATCCTCGGTAATCACGGGAAG
JMFF006H24+ TCGGTAATCACGGGAAG
JMFF007M10+ GAGATGGGGGCTGGTGTGGGTTGTACGGAGGGATATTGTATCCTCGGTAATCACGGGAAG
____________________________________________________________
consensus GAGATGGGGGCTGGTGTGGGTTGTACGGAGGGATATTGTATCCTCGGTAATCACGGGAAG
. : . : . : . : . : . :
rJMSF021J19- CGGG
rJMSF012I11- CGGGCGGCGGCGGCGCAGTTGAGAAATAATAGCTGGACGGAGGGGGAATTTGGAAATCAG
JMSF049A11+ GGAAATCAG
JMSF026F19+ CGGGCGGCGGCGG-GCAGTTGAGAAATAATAGCTGGACGGATGGGGAATTTGGAAATCAG
JMFF006H24+ CGGGCGGCGGCGGCGCAGTTGAGAAATAATAGCTGGACGGAGGGGGAATTTGGAAATCAG
JMFF007M10+ CGGGCGGCGGCGGCGCAGTTGAGAAATAATAGCTGGACGGAGGGGGAATTTGGAAATCAG
____________________________________________________________
consensus CGGGCGGCGGCGGCGCAGTTGAGAAATAATAGCTGGACGGAGGGGGAATTTGGAAATCAG
. : . : . : . : . : . :
rJMSF012I11- GGGGGCTCGGGCGTTCCTGGATAGAGATTTTGAGTCGGATCTTACCCTGGGGGCGACCGG
JMSF012I11+ GGGGGCTCGGGCGTTCCTGGATAGAGATTTTGAGTCGGATCTTACCCTGGGGGCGACCGG
JMSF049A11+ GGGGGCTCGGGCGTTCCTGGATAGAGATTNTGAGTCGGATCTTACCCTGGGGGCGACCGG
JMSF026F19+ GGGGGCTCGGGCGTTCCTGGATAGAGATTTTGAGTCGGATCTTACCCTGGGGGCGACCGG
JMFF006H24+ GGGGGCTCGGGCGTTCCTGGATAGAGATTTTGAGTCGGATCTTACCCTGGGGGCGACCGG
JMFF007M10+ GGGGGCTCGGGCGTTCCTGGATAGAGATTTTGAGTCGGATCTTACCCTGGGGGCGACCGG
____________________________________________________________
consensus GGGGGCTCGGGCGTTCCTGGATAGAGATTTTGAGTCGGATCTTACCCTGGGGGCGACCGG
. : . : . : . : . : . :
rJMSF012I11- AGGGTANAAGGAGCTCGAAACTTCTGACCTTCGTGGAATCATCCGAGCACATCACGTCCT
JMSF012I11+ AGGGTAGAAGGAGCTCGAAACTTCTGACCTTCGTGGAATCATCCGAGCACATCACGTCCT
JMSF049A11+ AGGGTAGAAGGAGCTCGAAACTTCTGACCTTCGTGGAATCATCCGAGCACATCACGTCCT
JMSF021J19+ TGGAATCATCCGAGCACATCACGTCCT
JMSF026F19+ AGGGTAGAAGGAGCTCGAAACTTCTGACCTTCGTGGAATCATCCGAGCACATCACGTCCT
JMFF006H24+ AGGGTAGAAGGAGCTCGAAACTTCTGACCTTCGTGGAATCATCCGAGCACATCACGTCCT
JMFF007M10+ AGGGTAGAAGGAGCTCGAAACTTCTGACCTTCGTGGAATCATCCGAGCACATCACGTCCT
____________________________________________________________
consensus AGGGTAGAAGGAGCTCGAAACTTCTGACCTTCGTGGAATCATCCGAGCACATCACGTCCT
. : . : . : . : . : . :
rJMSF012I11- TGAGCGGCAACCTTAGGG
JMSF012I11+ TGAGCGGCAACCTTAGGGTTCCGACCAACGGCTTGGGCGTCTCCGACGGCTTCGAGTGGA
JMSF049A11+ TGAGCGGCAACCTTAGGGTTCCGACCAACGGCTTGGGCGTCTCCGACGGCTTCGAGTGGA
JMSF021J19+ TGAGCGGCAACCTTAGGGTTCCGACCAACGGNTTGGGCGTCTCNGACGGCTTCGAGTGGA
JMSF026F19+ TGAGCGGCAACCTTAGGGTTCCGACCAACGGCTTGGGCGTCTCCGACGGCTTCGAGTGGA
JMFF006H24+ TGAGCGGCAACCTTAGGGTTCCGACCAACGGCTTGGGCGTCTCCGACGGCTTCGAGTGGA
JMFF007M10+ TGAGCGGCAACCTTAGGGTTCCGACCAACGGCTTGGGCGTCTCCGACGGCTTCGAGTGGA
____________________________________________________________
consensus TGAGCGGCAACCTTAGGGTTCCGACCAACGGCTTGGGCGTCTCCGACGGCTTCGAGTGGA
. : . : . : . : . : . :
JMSF012I11+ AGATCTCGAGAGTGAGCAGCGATTCCTGAGGCGGGACCGCCAGAGGAAGCACGAACCGCT
JMSF049A11+ AGATCTCGAGAGTGAGCAGCGATTCCTGAGGCGGGACCGCCAGAGGAAGCACGAACCGCT
JMSF021J19+ AGATCTCGAGAGTGAGCAGCGATTCCTGAGGCGGGACCNCCAGAGGAAGCACGAACCGCT
JMSF026F19+ AGATCTCGAGAGTGAGCAGCGATTCCTGAGGCGGGACCGCCAGAGGAAGCACGAACCGCT
JMFF006H24+ AGATCTCGAGAGTGAGCAGCGATTCCTGAGGCGGGACCGCCAGAGGAAGCACGAACCGCT
JMFF007M10+ AGATCTCGAGAGTGAGCAGCGATTCCTGAGGCGGGACCGCCAGAGGAAGCACGAACCGCT
____________________________________________________________
consensus AGATCTCGAGAGTGAGCAGCGATTCCTGAGGCGGGACCGCCAGAGGAAGCACGAACCGCT
. : . : . : . : . : . :
JMSF012I11+ CGTTCCACACCGGCTTGGTCGATCCATGATCGTCCGATTTGGTAGCGAGACGACGATCGG
JMSF049A11+ CNTTCCACACCGGNTTGGTCGATCCATGATCGTCCGATTTGGTAGCGAGACGACGATCGG
JMSF021J19+ NGTTCCACACCGGCTTGGTCGATCCATGATCGTCCGATTTGGTAGCGAGACGACGATCGG
JMSF026F19+ CGTTCCACACCGGCTTGGTCGATCCATGATCGTCCGATTTGGTAGCGAGACGACGATCGG
JMFF006H24+ CGTTCCACACCGGCTTGGTCGATCCATGATCGTCCGATTTGGTAGCGAGACGACGATCGG
JMFF007M10+ CGTTCCACACCGGCTTGGTCGATCCATGATCGTCCGATTTGGTAGCGAGACGACGATCGG
____________________________________________________________
consensus CGTTCCACACCGGCTTGGTCGATCCATGATCGTCCGATTTGGTAGCGAGACGACGATCGG
. : . : . : . : . : . :
JMSF012I11+ GATCCACCCAGAAGATCACATAGGGCTTGAGATCCCCGTGGCGCCAATTCACGTTCTTCA
JMSF049A11+ GATCCACCCAGAAGATCACATAGGGCTTGAGATCCCCGTGGCGCCAATTCACNTTCTTCA
JMSF021J19+ GATCCACCCAGAAGATCACATAGGGCTTGAGATCCCCGTGGCGCCAATTCACGTTCTTCA
JMSF026F19+ GATCCACCCAGAAGATCACATAGGGCTTGAGATCCCCGTGGCGCCAATTCACGTTCTTCA
JMFF006H24+ GATCCACCCAGAAGATCACATAGGGCTTGAGATCCCCGTGGCGCCAATTCACGTTCTTCA
JMFF007M10+ GATCCACCCAGAAGATCACATAGGGCTTGAGATCCCCGTGGCGCCAATTCACGTTCTTCA
____________________________________________________________
consensus GATCCACCCAGAAGATCACATAGGGCTTGAGATCCCCGTGGCGCCAATTCACGTTCTTCA
. : . : . : . : . : . :
JMSF012I11+ GATGCTTGGCGGAGACGATTGTGAAGTCGACATCGTACGGCTTCGAAGGCGGCAGAGAGC
JMSF049A11+ GATGCTTGGCGGAGACGATTGTGAAGTCGACATCGTACGGCTTCGAAGGCGGCAGAGAGC
JMSF021J19+ GATGCTTGGCGGAGACGATTGTGAAGTCGACATCGTACGGCTTCGAAGGCGGCAGAGAGC
JMSF026F19+ GATGCTTGGCGGAGACGATTGTGAAGTCGACATCGTACGGCTTCGAAGGCGGCAGAGAGC
JMFF006H24+ GATGCTTGGCGGAGACGATTGTGAAGTCGACATCGTACGGCTTCGAAGGCGGCAGAGAGC
JMFF007M10+ GATGCTTGGCGGAGACGATTGTGAAGTCGACATCGTACGGCTTCGAAGGCGGCAGAGAGC
____________________________________________________________
consensus GATGCTTGGCGGAGACGATTGTGAAGTCGACATCGTACGGCTTCGAAGGCGGCAGAGAGC
. : . : . : . : . : . :
JMSF012I11+ TCGCTGCTGCCATGGCGATTATCGTCCGAGGTACAGAAAGATGAGATTTACC
JMSF049A11+ TCGCTGCTGCCATGGCGATTATCGTCCGAGGTACAGAAAGATGAGATTTACC
JMSF021J19+ TCGNTGNTGCCATGGCGATTATCGTCCGAGGTACAGAAAGATGAGATTTACC
JMSF026F19+ TCGCTGCTGCCATGGCGATTATCGTCCGAGGTACAGAAAGATGAGATTTACC
JMFF006H24+ TCGCTGCTGCCATGGCGATTATCGTCCGAGGTACAGAAAGATGAGATTTAC
JMFF007M10+ TCGCTGCTGCCATGGCGATTATCGTCCGAGGTACAGAAAGATGAGATTTACAGAGAAAAC
____________________________________________________________
consensus TCGCTGCTGCCATGGCGATTATCGTCCGAGGTACAGAAAGATGAGATTTACCGAGAAAAC