Contig 007301:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF007I02Sequence515007301 (2)ref|XP_009794950.1|3e-33PREDICTED: amino-acid permease BAT1 homolog [Nicotiana sylvestris]762024316ref|XP_006344182.1|1e-127PREDICTED: amino-acid permease BAT1 homolog isoform X3 [Solanum tuberosum]
JMSF013L03Sequence529007301 (2)ref|XP_009594577.1|1e-82PREDICTED: amino-acid permease BAT1 homolog isoform X3 [Nicotiana tomentosiform714001310 (2)ref|XP_009786770.1|5e-72PREDICTED: amino-acid permease BAT1 homolog isoform X2 [Nicotiana sylvestris]

Alignment

This contig is upended


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JMSF013L03+                                                 GCTATTCAAGATAGCCTGTGAT
                      ____________________________________________________________
consensus                                                   GCTATTCAAGATAGCCTGTGAT
 
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JMSF013L03+           AGAAGNACTCCACCATGTATAGCAATAACTACGTATTTAGATGCTTCATATCCACCGCCG
                      ____________________________________________________________
consensus             AGAAGNACTCCACCATGTATAGCAATAACTACGTATTTAGATGCTTCATATCCACCGCCG
 
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JMSF013L03+           TTCATTCCACCTGTGCTAAGGAGAACCATCACTTGAATCAACTGTGCAAGTGAAAAGTTT
                      ____________________________________________________________
consensus             TTCATTCCACCTGTGCTAAGGAGAACCATCACTTGAATCAACTGTGCAAGTGAAAAGTTT
 
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JMSF013L03+           ACGCTAGCTGACACTGCCCACTGACCAACAACGTTGAACCAGCCGGTGATCCAAGAAGCA
                      ____________________________________________________________
consensus             ACGCTAGCTGACACTGCCCACTGACCAACAACGTTGAACCAGCCGGTGATCCAAGAAGCA
 
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JMSF013L03+           AAAGGAGCCCAGCTTTGACCAGCAAGCTTGGCACTCCAATAATAGAGACCCCCTGAGGTG
                      ____________________________________________________________
consensus             AAAGGAGCCCAGCTTTGACCAGCAAGCTTGGCACTCCAATAATAGAGACCCCCTGAGGTG
 
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JMSF013L03+           GGATAAGAAGAGCAAATTTCAGCCATGGATAGCCCAACAAACATGGTGAAGGTACCTGCA
JMFF007I02+                                    TGGATAGCCCAACAAACATGGTGAAGGTACCTGCA
                      ____________________________________________________________
consensus             GGATAAGAAGAGCAAATTTCAGCCATGGATAGCCCAACAAACATGGTGAAGGTACCTGCA
 
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JMSF013L03+           ATGACCCATCCATACACCAATGAAACTGGGCCACCAAAATTCAACCCAGTGCTGTAAAGG
JMFF007I02+           ATGACCCATCCATACACCAATGAAACTGGGCCACCAAAATTCAACCCAGTGCTGTAAAGG
                      ____________________________________________________________
consensus             ATGACCCATCCATACACCAATGAAACTGGGCCACCAAAATTCAACCCAGTGCTGTAAAGG
 
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JMSF013L03+           GTGTTCACGCCGGTAAGCACGGATATAATAGAGAAGGAAAACGCAAAGTTGGACAACACC
JMFF007I02+           GTGTTCACGCCGGTAAGCACGGATATAATAGAGAAGGAAAACGCAAAGTTGGACACCACC
                      ____________________________________________________________
consensus             GTGTTCACGCCGGTAAGCACGGATATAATAGAGAAGGAAAACGCAAAGTTGGACACCACC
 
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JMFF007I02+           AAGAGGTTGCGGTTGAGCTCTTGCTTGTAGCCGAGCTCGTGAAGCCGCGTATGGTCGGAA
                      ____________________________________________________________
consensus             AAGAGGTTGCGGTTGAGCTCTTGCTTGTAGCCGAGCTCGTGAAGCCGCGTATGGTCGGAA
 
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JMFF007I02+           TCAATAGAGTGTTTGGGTTCGCCGCCGTATGAAGAAATGGTCATTTTTCCGTCACTCACC
                      ____________________________________________________________
consensus             TCAATAGAGTGTTTGGGTTCGCCGCCGTATGAAGAAATGGTCATTTTTCCGTCACTCACC
 
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JMFF007I02+           TACTGTTCTTGGTTTCTTGCTTCTTTGTCGGTGGGTCTTGTCAAGTTTGGGACGAAACTG
                      ____________________________________________________________
consensus             TACTGTTCTTGGTTTCTTGCTTCTTTGTCGGTGGGTCTTGTCAAGTTTGGGACGAAACTG
 
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JMFF007I02+           GGAGGACAGGAAGAGTAAAGCCTCTGAATCTCCGATCAGTCGTGTAAGCTCACTATAAAG
                      ____________________________________________________________
consensus             GGAGGACAGGAAGAGTAAAGCCTCTGAATCTCCGATCAGTCGTGTAAGCTCACTATAAAG
 
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JMFF007I02+           TGGTCCAATTCGAAACGTAAAATTCCATGAATCTACGGAAATTTGGCAAATCTAAAAAAG
                      ____________________________________________________________
consensus             TGGTCCAATTCGAAACGTAAAATTCCATGAATCTACGGAAATTTGGCAAATCTAAAAAAG
 
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JMFF007I02+           TTACCACATGTATCGTATTACACTATTACTATTCCATGAGAACAAAATTTCCAGAGGGAC
                      ____________________________________________________________
consensus             TTACCACATGTATCGTATTACACTATTACTATTCCATGAGAACAAAATTTCCAGAGGGAC