Contig 007298:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF006L13Sequence491007298 (11)ref|XP_003522746.1|2e-87PREDICTED: peptidyl-prolyl cis-trans isomerase 1-like [Glycine max]
JMFF014G19Sequence489007298 (11)ref|XP_003522746.1|1e-88PREDICTED: peptidyl-prolyl cis-trans isomerase 1-like [Glycine max]652007298 (11)ref|XP_009590739.1|4e-69PREDICTED: peptidyl-prolyl cis-trans isomerase-like [Nicotiana tomentosiformis]
JMFN016N02Sequence582007298 (11)ref|XP_003522746.1|1e-96PREDICTED: peptidyl-prolyl cis-trans isomerase 1-like [Glycine max]
JMFN016P22Sequence563007298 (11)ref|XP_003522746.1|1e-96PREDICTED: peptidyl-prolyl cis-trans isomerase 1-like [Glycine max]
JMFN018K22Sequence605007298 (11)ref|XP_003522746.1|2e-96PREDICTED: peptidyl-prolyl cis-trans isomerase 1-like [Glycine max]
JMFN025P15Sequence604007298 (11)ref|XP_009590739.1|2e-62PREDICTED: peptidyl-prolyl cis-trans isomerase-like [Nicotiana tomentosiformis]
JMFN029O16Sequence601007298 (11)ref|XP_009590739.1|1e-61PREDICTED: peptidyl-prolyl cis-trans isomerase-like [Nicotiana tomentosiformis]
JMFN039B11Sequence631007298 (11)gb|ACF48822.1|3e-96cyclophilin [Gossypium hirsutum]
JMFN044K07Sequence608007298 (11)ref|XP_003522746.1|2e-96PREDICTED: peptidyl-prolyl cis-trans isomerase 1-like [Glycine max]
JMFN046M03Sequence580007298 (11)ref|XP_003522746.1|1e-96PREDICTED: peptidyl-prolyl cis-trans isomerase 1-like [Glycine max]

Alignment

This contig is upended


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JMFN029O16-                                                  GAGAACTAGTCTTGAGXXXXX
                      ____________________________________________________________
consensus                                                    GAGAACTAGTCTTGAGNNNNN
 
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JMFN029O16-           XXXXXXXXXXXXXXAAAAATATAAAACTAGTTTAATTGATAGAACCATCAAACTTAAGTA
JMFN025P15-                         AAAAATATAAAACTAGTTTAATTGATAGAACCATCAAACTTAAGTA
                      ____________________________________________________________
consensus             NNNNNNNNNNNNNNAAAAATATAAAACTAGTTTAATTGATAGAACCATCAAACTTAAGTA
 
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JMFN029O16-           CTCAACACATGAAAGCAAAGCATAAGGTCTGACACTAGACTGGGAGCAGGGGAAATAAAA
JMFN025P15-           CTCAACACATGAAAGCAAAGCATAAGGTCTGACACTAGACTGGGAGCAGGGGAAATAAAA
                      ____________________________________________________________
consensus             CTCAACACATGAAAGCAAAGCATAAGGTCTGACACTAGACTGGGAGCAGGGGAAATAAAA
 
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JMFN029O16-           AACAGAAAAAGACACTAAACGACGACGGATATGGAGATCAAACGGCCTCAAATCAAACAG
JMFN025P15-           AACAGAAAAAGACACTAAACGACGACGGATATGGAGATCAAACGGCCTCAAATCAAACAG
JMFN044K07+                                     GGATATGGAGATCAAACGGCCTCAAATCAAACAG
JMFN016N02+                                                               TCAAACAG
JMFN046M03+                                                                CAAACAG
JMFN039B11+                                             AGATCAAACGGCCTCAAATCAAACAG
JMFN018K22+                                        TATGGAGATCAAACGGCCTCAAATCAAACAG
                      ____________________________________________________________
consensus             AACAGAAAAAGACACTAAACGACGACGGATATGGAGATCAAACGGCCTCAAATCAAACAG
 
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JMFN029O16-           ATCATGGGCGGATCTAAATAAAAACAGACACTAAACGACGACGACAGATATGGAGACACA
JMFN025P15-           ATCATGGGCGGATCTAAATAAAAACAGACACTAAACGACGACGACAGATATGGAGACACA
JMFN044K07+           ATCATGGGCGGATCTAAATAAAAACAGACACTAAACGACGACGACAGATATGGAGACACA
JMFN016N02+           ATCATGGGCGGATCTAAATAAAAACAGACACTAAACGACGACGACAGATATGGAGACACA
JMFN046M03+           ATCATGGGCGGATCTAAATAAAAACAGACACTAAACGACGACGACAGATATGGAGACACA
JMFN039B11+           ATCATGGGCGGATCTAAATAAAAACAGACACTAAACGACGACGACAGATATGGAGACACA
rJMFF014G19-                                                                    CA
JMFN018K22+           ATCATGGGCGGATCTAAATAAAAACAGACACTAAACGACGACGACAGATATGGAGACACA
JMFN016P22+                                              CGACGACGACAGATATGGAGACACA
                      ____________________________________________________________
consensus             ATCATGGGCGGATCTAAATAAAAACAGACACTAAACGACGACGACAGATATGGAGACACA
 
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JMFN029O16-           CCGGCTTCGAGCACCTTCCGGAGCTGGATCCAACCGCCTCAACCTTCTTAATCACGTCAA
JMFN025P15-           CCGGCTTCGAGCACCTTCCGGAGCTGGATCCAACCGCCTCAACCTTCTTAATCACGTCAA
JMFN044K07+           CCGGCTTCGAGCACCTTCCGGAGCTGGATCCAACCGCCTCAACCTTCTTAATCACGTCAA
JMFN016N02+           CCGGCTTCGAGCACCTTCCGGAGCTGGATCCAACCGCCTCAACCTTCTTAATCACGTCAA
JMFN046M03+           CCGGCTTCGAGCACCTTCCGGAGCTGGATCCAACCGCCTCAACCTTCTTAATCACGTCAA
JMFN039B11+           CCGGCTTCGAGCACCTTCCGGAGCTGGATCCAACCGCCTCAACCTTCTTAATCACGTCAA
rJMFF014G19-          CCGGCTTCGAGCACCTTCCGGAGCTGGATCCAACCGCCTCAACCTTCTTAATCACGTCAA
JMFN018K22+           CCGGCTTCGAGCACCTTCCGGAGCTGGATCCAACCGCCTCAACCTTCTTAATCACGTCAA
JMFF014G19+                                                        TCTTAATCACGTCAA
JMFN016P22+           CCGGCTTCGAGCACCTTCCGGAGCTGGATCCAACCGCCTCAACCTTCTTAATCACGTCAA
JMFF006L13+                                                           TAATCACGTCAA
                      ____________________________________________________________
consensus             CCGGCTTCGAGCACCTTCCGGAGCTGGATCCAACCGCCTCAACCTTCTTAATCACGTCAA
 
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JMFN029O16-           AGCCCTCGACGACTTGGCCGAACACCACGTGCTTCCCGTCGAGCCACTCCGTCTTCGCGG
JMFN025P15-           AGCCCTCGACGACTTGGCCGAACACCACGTGCTTCCCGTCGAGCCACTCCGTCTTCGCGG
JMFN044K07+           AGCCCTCGACGACTTGGCCGAACACCACGTGCTTCCCGTCGAGCCACTCCGTCTTCGCGG
JMFN016N02+           AGCCCTCGACGACTTGGCCGAACACCACGTGCTTCCCGTCGAGCCACTCCGTCTTCGCGG
JMFN046M03+           AGCCCTCGACGACTTGGCCGAACACCACGTGCTTCCCGTCGAGCCACTCCGTCTTCGCGG
JMFN039B11+           AGCCCTCGACGACTTGGCCGAACACCACGTGCTTCCCGTCGAGCCACTCCGTCTTCGCGG
rJMFF014G19-          AGCCCTCGACGACTTGGCCGAACACCACGTGCTTCCCGTCGAGCCACTCCGTCTTCGCGG
JMFN018K22+           AGCCCTCGACGACTTGGCCGAACACCACGTGCTTCCCGTCGAGCCACTCCGTCTTCGCGG
JMFF014G19+           AGCCCTCGACGACTTGGCCGAACACCACGTGCTTCCCGTCGAGCCACTCCGTCTTCGCGG
JMFN016P22+           AGCCCTCGACGACTTGGCCGAACACCACGTGCTTCCCGTCGAGCCACTCCGTCTTCGCGG
JMFF006L13+           AGCCCTCGACGACTTGGCCGAACACCACGTGCTTCCCGTCGAGCCACTCCGTCTTCGCGG
                      ____________________________________________________________
consensus             AGCCCTCGACGACTTGGCCGAACACCACGTGCTTCCCGTCGAGCCACTCCGTCTTCGCGG
 
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JMFN029O16-           TGCAGATGAAGAACTGTGAGCCGTTGGTGTTGGGGCCGGCATTCGCCATGGAGAGGATGC
JMFN025P15-           TGCAGATGAAGAACTGTGAGCCGTTGGTGTTGGGGCCGGCATTCGCCATGGAGAGGATGC
JMFN044K07+           TGCAGATGAAGAACTGTGAGCCGTTGGTGTTGGGGCCGGCATTCGCCATGGAGAGGATGC
JMFN016N02+           TGCAGATGAAGAACTGTGAGCCGTTGGTGTTGGGGCCGGCATTCGCCATGGAGAGGATGC
JMFN046M03+           TGCAGATGAAGAACTGTGAGCCGTTGGTGTTGGGGCCGGCATTCGCCATGGAGAGGATGC
JMFN039B11+           TGCAGATGAAGAACTGTGAGCCGTTGGTGTTGGGGCCGGCATTCGCCATGGAGAGGATGC
rJMFF014G19-          TGCAGATGAAGAACTGTGAGCCGTTGGTGTTGGGGCCGGCATTCGCCATGGAGAGGATGC
JMFN018K22+           TGCAGATGAAGAACTGTGAGCCGTTGGTGTTGGGGCCGGCATTCGCCATGGAGAGGATGC
JMFF014G19+           TGCAGATGAAGAACTGTGAGCCGTTGGTGTTGGGGCCGGCATTCGCCATGGAGAGGATGC
JMFN016P22+           TGCAGATGAAGAACTGTGAGCCGTTGGTGTTGGGGCCGGCATTCGCCATGGAGAGGATGC
JMFF006L13+           TGCAGATGAAGAACTGTGAGCCGTTGGTGTTGGGGCCGGCATTCGCCATGGAGAGGATGC
                      ____________________________________________________________
consensus             TGCAGATGAAGAACTGTGAGCCGTTGGTGTTGGGGCCGGCATTCGCCATGGAGAGGATGC
 
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JMFN029O16-           CGGGGCCAGTGTGCTTCTTCACGAAGTTCTCATCGGCAAACTTCGATCCGTAGATCGATT
JMFN025P15-           CGGGGCCAGTGTGCTTCTTCACGAAGTTCTCATCGGCAAACTTCGATCCGTAGATCGATT
JMFN044K07+           CGGGGCCAGTGTGCTTCTTCACGAAGTTCTCATCGGCAAACTTCGATCCGTAGATCGATT
JMFN016N02+           CGGGGCCAGTGTGCTTCTTCACGAAGTTCTCATCGGCAAACTTCGATCCGTAGATCGATT
JMFN046M03+           CGGGGCCAGTGTGCTTCTTCACGAAGTTCTCATCGGCAAACTTCGATCCGTAGATCGATT
JMFN039B11+           CGGGGCCAGTGTGCTTCTTCACGAAGTTCTCATCGGCAAACTTCGATCCGTAGATCGATT
rJMFF014G19-          CGGGGCCAGTGTGCTTCTTCACGAAGTTCTCATCGGCAAACTTCGATCCGTAGATCGATT
JMFN018K22+           CGGGGCCAGTGTGCTTCTTCACGAAGTTCTCATCGGCAAACTTCGATCCGTAGATCGATT
JMFF014G19+           CGGGGCCAGTGTGCTTCTTCACGAAGTTCTCATCGGCAAACTTCGATCCGTAGATCGATT
JMFN016P22+           CGGGGCCAGTGTGCTTCTTCACGAAGTTCTCATCGGCAAACTTCGATCCGTAGATCGATT
JMFF006L13+           CGGGGCCAGTGTGCTTCTTCACGAAGTTCTCATCGGCAAACTTCGATCCGTAGATCGATT
                      ____________________________________________________________
consensus             CGGGGCCAGTGTGCTTCTTCACGAAGTTCTCATCGGCAAACTTCGATCCGTAGATCGATT
 
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JMFN029O16-           CGCCTCCGGTGCCGTTTCCAGCGGTGAAGTCGCCTCCCTGGCACATGAAATTAGGGATCA
JMFN025P15-           CGCCTCCGGTGCCGTTTCCAGCGGTGAAGTCGCCTCCCTGGCACATGAAATTAGGGATCA
JMFN044K07+           CGCCTCCGGTGCCGTTTCCAGCGGTGAAGTCGCCTCCCTGGCACATGAAATTAGGGATCA
JMFN016N02+           CGCCTCCGGTGCCGTTTCCAGCGGTGAAGTCGCCTCCCTGGCACATGAAATTAGGGATCA
JMFN046M03+           CGCCTCCGGTGCCGTTTCCAGCGGTGAAGTCGCCTCCCTGGCACATGAAATTAGGGATCA
JMFN039B11+           CGCCTCCGGTGCCGTTTCCAGCGGTGAAGTCGCCTCCCTGGCACATGAAATTAGGGATCA
rJMFF014G19-          CGCCTCCGGTGCCGTTTCCAGCGGTGAAGTCGCCTCCCTGGCACATGAAATTAGGGATCA
JMFN018K22+           CGCCTCCGGTGCCGTTTCCAGCGGTGAAGTCGCCTCCCTGGCACATGAAATTAGGGATCA
JMFF014G19+           CGCCTCCGGTGCCGTTTCCAGCGGTGAAGTCGCCTCCCTGGCACATGAAATTAGGGATCA
JMFN016P22+           CGCCTCCGGTGCCGTTTCCAGCGGTGAAGTCGCCTCCCTGGCACATGAAATTAGGGATCA
JMFF006L13+           CGCCTCCGGTGCCGTTTCCAGCGGTGAAGTCGCCTCCCTGGCACATGAAATTAGGGATCA
                      ____________________________________________________________
consensus             CGCCTCCGGTGCCGTTTCCAGCGGTGAAGTCGCCTCCCTGGCACATGAAATTAGGGATCA
 
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JMFN029O16-           CGCGGTGGAAGGTGGATCCCTTGTAGTGCAAGGGCTTGCC                    
JMFN025P15-           CGCGGTGGAAGGTGGATCCCTTGTAGTGCAAGGGCTTGCCGGA                 
JMFN044K07+           CGCGGTGGAAGGTGGATCCCTTGTAGTGCAAGGGCTTGCCGGACCTCCCGACTCCCTTCT
JMFN016N02+           CGCGGTGGAAGGTGGATCCCTTGTAGTGCAAGGGCTTGCCGGACCTCCCGACTCCCTTCT
JMFN046M03+           CGCGGTGGAAGGTGGATCCCTTGTAGTGCAAGGGCTTGCCGGACCTCCCGACTCCCTTCT
JMFN039B11+           CGCGGTGGAAGGTGGATCCCTTGTAGTGCAAGGGCTTGCCGGACCTCCCGACTCCCTTCT
rJMFF014G19-          CGCGGTGGAAGGTGGATCCCTTGTAGTGCAAGGGCTTGCCGGACCTCCCGACTCCCTTCT
JMFN018K22+           CGCGGTGGAAGGTGGATCCCTTGTAGTGCAAGGGCTTGCCGGACCTCCCGACTCCCTTCT
JMFF014G19+           CGCGGTGGAAGGTGGATCCCTTGTAGTGCAAGGGCTTGCCGGACCTCCCGACTCCCTTCT
JMFN016P22+           CGCGGTGGAAGGTGGATCCCTTGTAGTGCAAGGGCTTGCCGGACCTCCCGACTCCCTTCT
JMFF006L13+           CGCGGTGGAAGGTGGATCCCTTGTAGTGCAAGGGCTTGCCGGACCTCCCGACTCCCTTCT
                      ____________________________________________________________
consensus             CGCGGTGGAAGGTGGATCCCTTGTAGTGCAAGGGCTTGCCGGACCTCCCGACTCCCTTCT
 
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JMFN044K07+           CTCCGGTGCAGAG-AGCACGGAAGTTTTCGGCGGTCTTTGGAGTGGCATCGGCGAAGAGC
JMFN016N02+           CTCCGGTGCAGAG-AGCACGGAAGTTTTCGGCGGTCTTTGGAGTGGCATCGGCGAAGAGC
JMFN046M03+           CTCCGGTGCAGAG-AGCACGGAAGTTTTCGGCGGTCTTTGGAGTGGCATCGGCGAAGAGC
JMFN039B11+           CTCCGGTGCAGAG-AGCACGGAAGTTTTCGGCGGTCT                       
rJMFF014G19-          CTCCGGTGCAGAGAAGCACGGAAGTTTTCGGCGGTCTTTGGAGTGGCATCGGCGAAGAGC
JMFN018K22+           CTCCGGTGCAGAG-AGCACGGAAGTTTTCGGCGGTCTTTGGAGTGGCATCGGCGAAGAGC
JMFF014G19+           CTCCGGTGCAGAG-AGCACGGAAGTTTTCGGCGGTCTTTGGAGTGGCATCGGCGAAGAGC
JMFN016P22+           CTCCGGTGCAGAG-AGCACGGAAGTTTTCGGCGGTCTTTGGAGTGGCATCGGCGAAGAGC
JMFF006L13+           CTCCGGTGCAGAG-AGCACGGAAGTTTTCGGCGGTCTTTGGAGTGGCATCGGCGAAGAGC
                      ____________________________________________________________
consensus             CTCCGGTGCAGAG-AGCACGGAAGTTTTCGGCGGTCTTTGGAGTGGCATCGGCGAAGAGC
 
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JMFN044K07+           TCCATCACGACGCGGCCGGCCGGTTGACCACCGATGGTCATATCGAAGAAGACCTTAGGG
JMFN016N02+           TCCATCACGACGCGGCCGGCCGGTTGACCACCGATGGTCATATCGAAGAAGACCTTAGGG
JMFN046M03+           TCCATCACGACGCGGCCGGCCGGTTGACCACCGATGGTCATATCGAAGAAGACCTTAGGG
rJMFF014G19-          TCCATCACGACGCGGCC                                           
JMFN018K22+           TCCATCACGACGCGGCCGGCCGGTTGACCACCGATGGTCATATCGAAGAAGACCTTAGGG
JMFF014G19+           TCCATCACGACGCGGCCGGCCGGTTGACCACCGATGGTCATATCGAAGAAGACCTTAGGG
JMFN016P22+           TCCATCACGACGCGGCCGGCCGGTTGACCACCGATGGTCATATCGAAGAAGACCTTAGGG
JMFF006L13+           TCCATCACGACGCGGCCGGCCGGTTGACCACCGATGGTCATATCGAAGAAGACCTTAGGG
                      ____________________________________________________________
consensus             TCCATCACGACGCGGCCGGCCGGTTGACCACCGATGGTCATATCGAAGAAGACCTTAGGG
 
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JMFN044K07+           TTAGCCATCAATTTTTCTCTCGCAAACAAACAAAC                         
JMFN016N02+           TTAGCCATCAATTTTTCTCTCGCAAACAAACAAAC                         
JMFN046M03+           TTAGCCATCAATTTTTCTCTCGCAAACAAACAAA                          
JMFN018K22+           TTAGCCATCAATTTTTCTCTCGCAAACAAACAAAC                         
JMFF014G19+           TTAGCCATCAATTTTTCTCTCGCAAACAAACAAACAAAAACAAAAGCTC           
JMFN016P22+           TTAGCCATCAATTTTTCTCTCGCAAACAAACAAACAAAAACAAAAGCTC           
JMFF006L13+           TTAGCCATCAATTTTTCTCTCGCAAACAAACAAACAAAAACAAAAGCTCTCAGTGACTAC
                      ____________________________________________________________
consensus             TTAGCCATCAATTTTTCTCTCGCAAACAAACAAACAAAAACAAAAGCTCTCAGTGACTAC