Contig 007296:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF006E22Sequence385007296 (4)ref|XP_010242658.1|2e-77PREDICTED: stromal 70 kDa heat shock-related protein, chloroplastic-like [Nelum764003945 (2)gb|ABZ04080.1|3e-90chloroplast heat shock protein 70-1 [Ipomoea nil]
JMFF033B12Sequence574007296 (4)gb|ABZ04080.1|5e-128chloroplast heat shock protein 70-1 [Ipomoea nil]708003945 (2)gb|ABZ04080.1|6e-76chloroplast heat shock protein 70-1 [Ipomoea nil]
JMFS071D02Sequence611007296 (4)gb|ABZ04081.1|8e-123chloroplast heat shock protein 70-2 [Ipomoea nil]
JMFS085A12Sequence610007296 (4)gb|ABZ04081.1|8e-123chloroplast heat shock protein 70-2 [Ipomoea nil]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS071D02+ TTTGTCATGACACCACCCAGAGTTTCCAAAC
JMFS085A12+ TTGTCATGACACCACCCAGAGTTTCCAAAC
                      ____________________________________________________________
consensus TTTGTCATGACACCACCCAGAGTTTCCAAAC
 
. : . : . : . : . : . :
JMFS071D02+ CAATGGATAATGGAGTCACATCCAAGAGAACAATATCACTTACATCTCCAGACAAAACAC
JMFS085A12+ CAATGGATAATGGAGTCACATCCAAGAGAACAATATCACTTACATCTCCAGACAAAACAC
                      ____________________________________________________________
consensus CAATGGATAATGGAGTCACATCCAAGAGAACAATATCACTTACATCTCCAGACAAAACAC
 
. : . : . : . : . : . :
JMFS071D02+ CAGCCTGAACTGCAGCCCCAAGTGCAACAACTTCATCAGGGTTAACAGTGACATTAGGGT
JMFS085A12+ CAGCCTGAACTGCAGCCCCAAGTGCAACAACTTCATCAGGGTTAACAGTGACATTAGGGT
                      ____________________________________________________________
consensus CAGCCTGAACTGCAGCCCCAAGTGCAACAACTTCATCAGGGTTAACAGTGACATTAGGGT
 
. : . : . : . : . : . :
JMFS071D02+ CCTTTCCAGTCAGTTTCTTGACTAATTCCTGAACAGCAGGAATCCGAGTTGAGCCCCCAA
JMFS085A12+ CCTTTCCAGTCAGTTTCTTGACTAATTCCTGAACAGCAGGAATCCGAGTTGAGCCCCCAA
                      ____________________________________________________________
consensus CCTTTCCAGTCAGTTTCTTGACTAATTCCTGAACAGCAGGAATCCGAGTTGAGCCCCCAA
 
. : . : . : . : . : . :
JMFS071D02+ CAAGGATCACTTCATCAATATCACTAAATGAGAGCTTTGCATCTCTCAAGGAATTTTGAA
JMFS085A12+ CAAGGATCACTTCATCAATATCACTAAATGAGAGCTTTGCATCTCTCAAGGAATTTTGAA
JMFF033B12+ GAGAGCTTTGCATCTCTCAATGAATTCTGGA
                      ____________________________________________________________
consensus CAAGGATCACTTCATCAATATCACTAAATGAGAGCTTTGCATCTCTCAAGGAATTTTGAA
 
. : . : . : . : . : . :
JMFS071D02+ CTGGTGTTTTCAGCCTGTCAAGCAAGTCTGAGCACAGCTCCTCGAACTTAGCTCGAGTAA
JMFS085A12+ CTGGTGTTTTCAGCCTGTCAAGCAAGTCTGAGCACAGCTCCTCGAACTTAGCTCGAGTAA
JMFF033B12+ CGGGTGTTTTGAGTCTGTCAAGCAGATCTGAACACAATTCCTCAAACTTAGCTCGAGTTA
                      ____________________________________________________________
consensus CTGGTGTTTTCAGCCTGTCAAGCAAGTCTGAGCACAGCTCCTCGAACTTAGCTCGAGTAA
 
. : . : . : . : . : . :
JMFS071D02+ TAGTGGTTTCAATATGCTTAGGACCATCTGATGTAGCAGTAATGAAGGGCAAGCTGATGT
JMFS085A12+ TAGTGGTTTCAATATGCTTAGGACCATCTGATGTAGCAGTAATGAAGGGCAAGCTGATGT
JMFF033B12+ GGGTTGTTTCAATATGTTTAGGACCATCAGCCGTGGCTGTAATGAAGGGCAAGCTAATGT
                      ____________________________________________________________
consensus TAGTGGTTTCAATATGCTTAGGACCATCTGATGTAGCAGTAATGAAGGGCAAGCTGATGT
 
. : . : . : . : . : . :
JMFS071D02+ TAGTCTGTGTTAATGATGACAGCTCCATCTTAGCTTTCTCAGCTGTCTCAGTCAGACGCT
JMFS085A12+ TAGTCTGTGTTAATGATGACAGCTCCATCTTAGCTTTCTCAGCTGTCTCAGTCAGACGCT
JMFF033B12+ TAGTCTGCGTCAACGATGACAGCTCCATCTTAGCTTTCTCAGCTGTCTCAGTCAGACGCT
JMFF006E22+ TTCTCAGCTGTCTCAGTCAGACGCT
                      ____________________________________________________________
consensus TAGTCTGTGTTAATGATGACAGCTCCATCTTAGCTTTCTCAGCTGTCTCAGTCAGACGCT
 
. : . : . : . : . : . :
JMFS071D02+ GAAGAGCTTGTTTGTCCTTGAGAAGATCTATGCCTTCATCCTTCTTGAAACTTGAAGCAA
JMFS085A12+ GAAGAGCTTGTTTGTCCTTGAGAAGATCTATGCCTTCATCCTTCTTGAAACTTGAAGCAA
JMFF033B12+ GAAGAGCTTGTTTGTCCTTGAGGAGATCTATGCCTTCATCCTTCTTGAAATTTGAAGCAA
JMFF006E22+ GAAGAGCTTGTTTGTCCTTGAGGAGATNTATGCCTTCATCCTTCTTGAAATTTGAAGCAA
                      ____________________________________________________________
consensus GAAGAGCTTGTTTGTCCTTGAGGAGATCTATGCCTTCATCCTTCTTGAAATTTGAAGCAA
 
. : . : . : . : . : . :
JMFS071D02+ GCCAATCGACAATTCTCTTATCAAAATCATCACCACCAAGATGGGTATCTCCAGAAGTAG
JMFS085A12+ GCCAATCGACAATTCTCTTATCAAAATCATCACCACCAAGATGGGTATCTCCAGAAGTAG
JMFF033B12+ GCCAGTCAACAACTCTCTTATCAAAATCATCACCACCAAGATGGGTATCTCCAGAAGTAG
JMFF006E22+ GCCAGTCAACAACTCTNTTATCAAAATCATCACCACCAAGATGGGTATCTCCAGAAGTAG
                      ____________________________________________________________
consensus GCCAGTCGACAATTCTCTTATCAAAATCATCACCACCAAGATGGGTATCTCCAGAAGTAG
 
. : . : . : . : . : . :
JMFS071D02+ ACAACACCTCAAATACACCATCACCAAC
JMFS085A12+ ACAACACCTCAAATACACCATCACCAAC
JMFF033B12+ ACAGCACCTCAAACACACCATCACCAACTTCTAGAACTGAAACATCAAAGGTTCCACCTC
JMFF006E22+ ACAGCACCTCAAACACACCATCACCAACTTNTAGAACTGAAACATCAAAGGTTCCACCTC
                      ____________________________________________________________
consensus ACAGCACCTCAAATACACCATCACCAACTTCTAGAACTGAAACATCAAAGGTTCCACCTC
 
. : . : . : . : . : . :
JMFF033B12+ CAAGGTCAAACACCAAAATAGTTTCATTGTTTTTCCTTTCAAAACCATAAGCCAATGAAG
JMFF006E22+ CAAGGTCAAACACCAAAATAGTTTCATTGTTTTTCCTTTCAAAACCATAAGCCAATGAAG
                      ____________________________________________________________
consensus CAAGGTCAAACACCAAAATAGTTTCATTGTTTTTCCTTTCAAAACCATAAGCCAATGAAG
 
. : . : . : . : . : . :
JMFF033B12+ CAGCAGTAGGTTCATTTATAATACGAAGCACCTCCAGTCCAGCAATACGGCCAGCATCCT
JMFF006E22+ CAGCAGTAGGTTCATTTATAATACGAAGCACCTCCAGTCCAGCAATACGGCCAGCATCCT
                      ____________________________________________________________
consensus CAGCAGTAGGTTCATTTATAATACGAAGCACCTCCAGTCCAGCAATACGGCCAGCATCCT
 
. : . : . : . : . : . :
JMFF033B12+ TAGTTGCTGTTCTTTGAGAATCATTGAAGTATGCAGGAACTGTGACTACAGCTTTGGAAA
JMFF006E22+ TAGTTGCTGTTCTTTGAGAATCATTGAAGTATGCAGGAACTGTGACTACAGCTTTGGAAA
                      ____________________________________________________________
consensus TAGTTGCTGTTCTTTGAGAATCATTGAAGTATGCAGGAACTGTGACTACAGCTTTGGAAA