| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF004J15 | Sequence | 542 | 007288 (16) | ref|XP_006284458.1| | 1e-88 | hypothetical protein CARUB_v10005646mg [Capsella rubella] gb|EOA17356.1| hypothe | 760 | 007288 (16) | ref|XP_011077665.1| | 7e-115 | PREDICTED: proteasome subunit beta type-6 [Sesamum indicum] |
| JMFF016G07 | Sequence | 567 | 007288 (16) | gb|KCW80738.1| | 6e-100 | hypothetical protein EUGRSUZ_C02133 [Eucalyptus grandis] | |||||
| JMFF036A24 | Sequence | 515 | 007288 (16) | ref|XP_006284458.1| | 6e-91 | hypothetical protein CARUB_v10005646mg [Capsella rubella] gb|EOA17356.1| hypothe | 738 | 007288 (16) | ref|XP_011077665.1| | 1e-77 | PREDICTED: proteasome subunit beta type-6 [Sesamum indicum] |
| JMFF040P06 | Sequence | 761 | 007288 (16) | ref|XP_011077665.1| | 2e-110 | PREDICTED: proteasome subunit beta type-6 [Sesamum indicum] | |||||
| JMFN018E05 | Sequence | 581 | 007288 (16) | ref|XP_006284458.1| | 3e-80 | hypothetical protein CARUB_v10005646mg [Capsella rubella] gb|EOA17356.1| hypothe | |||||
| JMFN043A24 | Sequence | 477 | 007288 (16) | gb|EYU25752.1| | 1e-37 | hypothetical protein MIMGU_mgv1a012906mg [Erythranthe guttata] | |||||
| JMFN044E16 | Sequence | 485 | 007288 (16) | gb|EYU25752.1| | 2e-40 | hypothetical protein MIMGU_mgv1a012906mg [Erythranthe guttata] | |||||
| JMFN046G08 | Sequence | 477 | 007288 (16) | gb|EYU25752.1| | 1e-37 | hypothetical protein MIMGU_mgv1a012906mg [Erythranthe guttata] | |||||
| JMSF031I10 | Sequence | 585 | 007288 (16) | ref|XP_006284458.1| | 3e-102 | hypothetical protein CARUB_v10005646mg [Capsella rubella] gb|EOA17356.1| hypothe | 720 | 007288 (16) | ref|XP_011077665.1| | 3e-106 | PREDICTED: proteasome subunit beta type-6 [Sesamum indicum] |
| JMSF038D05 | Sequence | 677 | 007288 (16) | ref|XP_010048490.1| | 2e-122 | PREDICTED: proteasome subunit beta type-6 [Eucalyptus grandis] gb|KCW80737.1| hy | 908 | 007288 (16) | ref|XP_009783268.1| | 2e-148 | PREDICTED: proteasome subunit beta type-6-like [Nicotiana sylvestris] |
| JMSF040M21 | Sequence | 581 | 007288 (16) | ref|XP_006284458.1| | 3e-102 | hypothetical protein CARUB_v10005646mg [Capsella rubella] gb|EOA17356.1| hypothe | 834 | 007288 (16) | ref|XP_009783268.1| | 7e-132 | PREDICTED: proteasome subunit beta type-6-like [Nicotiana sylvestris] |
This contig is upended
. : . : . : . : . : . :
JMFN046G08+ ACCGGAGCTAAATAGTACTCATTTAATCAAATGTTAAAACTCAACTTATAAAA
JMFN043A24+ ACCGGAGCTAAATAGTACTCATTTAATCAAATGTTAAAACTCAACTTATAAAA
JMFN044E16+ ACCGGAGCTAAATAGTACTCATTTAATCAAATGTTAAAACTCAACTTATAAAA
rJMFF036A24- ATGTTAAAACTCAACTTATAAAA
rJMSF031I10- AAA
rJMFF040P06- ATGTTAAAACTCAACTTATAAAA
rJMFF004J15- ACTTATAAAA
____________________________________________________________
consensus ACCGGAGCTAAATAGTACTCATTTAATCAAATGTTAAAACTCAACTTATAAAA
. : . : . : . : . : . :
JMFN046G08+ TCCACAAAGTGAAAATAGAGTTACATTCAGAAACTGGTGGTTTTGATTTTTGAAGTAGGA
JMFN043A24+ TCCACAAAGTGAAAATAGAGTTACATTCAGAAACTGGTGGTTTTGATTTTTGAAGTAGGA
JMFN044E16+ TCCACAAAGTGAAAATAGAGTTACATTCAGAAACTGGTGGTTTTGATTTTTGAAGTAGGA
rJMFF036A24- TCCACAAAGTGAAAATAGAGTTACATTCAGAAACTGGTGGTTTTGATTTTTGAAGTAGGA
rJMSF031I10- TCCACAAAGTGAAAATAGAGTTACATTCAGAAACTGGTGGTTTTGATTTTTGAAGTAGGA
rJMFF040P06- TCCACAAAGTGAAAATAGAGTTACATTCAGAAACTGGTGGTTTTGATTTTTGAAGTAGGA
rJMFF004J15- TCCACAAAGTGAAAATAGAGTTACATTCAGAAACTGGTGGTTTTGATTTTTGAAGTAGGA
rJMSF040M21- GAAAATAGAGTTACATTCAGAAACTGGTGGTTTTGATTTTTGAAGTAGGA
rJMSF038D05- AAATAGAGTTACATTCAGAAACTGGTGGTTTTGATTTTTGAAGTAGGA
____________________________________________________________
consensus TCCACAAAGTGAAAATAGAGTTACATTCAGAAACTGGTGGTTTTGATTTTTGAAGTAGGA
. : . : . : . : . : . :
JMFN046G08+ AACATGAATACAAATATCACTTTGGACAGCTATTGATCCCAAAAGGAAATAAAGTTAAGG
JMFN043A24+ AACATGAATACAAATATCAGTTTGGACAGCTATTGATCCCAAAAGGAAATAAAGTTAAGG
JMFN044E16+ AACATGAATACAAATATCAGTTTGGACAGCTATTGATCCCAAAAGGAAATAAAGTTAAGG
rJMFF036A24- AACATGAATACAAATATCAGTTTGGACAGCTATTGATCCCAAAAGGAAATAAAGTTAAGG
rJMSF031I10- AACATGAATACAAATATCAGTTTGGACAGCTATTGATCCCAAAAGGAAATAAAGTTAAGG
rJMFF040P06- AACATGAATACAAATATCAGTTTGGACAGCTATTGATCCCAAAAGGAAATAAAGTTAAGG
rJMFF004J15- AACATGAATACAAATATCAGTTTGGACAGCTATTGATCCCAAAAGGAAATAAAGTTAAGG
rJMSF040M21- AACATGAATACAAATATCAGTTTGGACAGCTATTGATCCCAAAAGGAAATAAAGTTAAGG
rJMSF038D05- AACATGAATACAAATATCAGTTTGGACAGCTATTGATCCCAAAAGGAAATAAAGTTAAGG
____________________________________________________________
consensus AACATGAATACAAATATCAGTTTGGACAGCTATTGATCCCAAAAGGAAATAAAGTTAAGG
. : . : . : . : . : . :
JMFN046G08+ GCGGCAAGGCTACGGCAACATAGAGTGAGGAAAGCGTCCGGTGTGCCTTAGCGAGAGATG
JMFN043A24+ GCGGCAAGGCTACGGCAACATAGAGTGAGGAAAGCGTCCGGTGTGCCTTAGCGAGAGATG
JMFN044E16+ GCGGCAAGGCTACGGCAACATAGAGTGAGGAAAGCGTCCGGTGTGCCTTAGCGAGAGATG
rJMFF036A24- GCGGCAAGGCTACGGCAACATAGAGTGAGGAAAGCGTCCGGTGTGCCTTAGCGAGAGATG
rJMSF031I10- GCGGCAAGGCTACGGCAACATAGAGTGAGGAAAGCGTCCGGTGTGCCTTAGCGAGAGATG
rJMFF040P06- GCGGCAAGGCTACGGCAACATAGAGTGAGGAAAGCGTCCGGTGTGCCTTAGCGAGAGATG
rJMFF004J15- GCGGCAAGGCTACGGCAACATAGAGTGAGGAAAGCGTCCGGTGTGCCTTAGCGAGAGATG
rJMSF040M21- GCGGCAAGGCTACGGCAACATAGAGTGAGGAAAGCGTCCGGTGTGCCTTAGCGAGAGATG
rJMSF038D05- GCGGCAAGGCTACGGCAACATAGAGTGAGGAAAGCGTCCGGTGTGCCTTAGCGAGAGATG
____________________________________________________________
consensus GCGGCAAGGCTACGGCAACATAGAGTGAGGAAAGCGTCCGGTGTGCCTTAGCGAGAGATG
. : . : . : . : . : . :
JMFN046G08+ CCCTGCGTTGGTTCAACTAACCATTGGCTCAGGACTGGTTGAAGGCAAAATATCGAGGAG
JMFN043A24+ CCCTGCGTTGGTTCAACTAACCATTGGCTCAGGACTGGTTGAAGGCAAAATATCGAGGAG
JMFN044E16+ CCCTGCGTTGGTTCAACTAACCATTGGCTCAGGACTGGTTGAAGGCAAAATATCGAGGAG
rJMFF036A24- CCCTGCGTCGGTTCAACTAACCATTGGCTCAGGANTGGTTGAAGGCAAAATATCGAGGAG
rJMSF031I10- CCCTGCGTTGGTTCAACTAACCATTGGCTCAGGACTGGTTGAAGGCAAAATATCGAGGAG
rJMFF040P06- CCCTGCGTTGGTTCAACTAACCATTGGCTCAGGACTGGTTGAAGGCAAAATATCGAGGAG
rJMFF004J15- CCCTGCGTTGGTTCAACTAACCATTGGCTCAGGACTGGTTGAAGGCAAAATATCGAGGAG
rJMSF040M21- CCCTGCGTTGGTTCAACTAACCATTGGCTCAGGACTGGTTGAAGGCAAAATATCGAGGAG
rJMSF038D05- CCCTGCGTTGGTTCAACTAACCATTGGCTCAGGACTGGTTGAAGGCAAAATATCGAGGAG
____________________________________________________________
consensus CCCTGCGTTGGTTCAACTAACCATTGGCTCAGGACTGGTTGAAGGCAAAATATCGAGGAG
. : . : . : . : . : . :
JMFN046G08+ AGAATTATGTGCCTCCATCTCTTCATGCCATAGAGGAAGTGTGTCACCAGGATAGAATTT
JMFN043A24+ AGAATTATGTGCCTCCATCTCTTCATGCCATAGAGGAAGTGTGTCACCAGGATAGAATTT
JMFN044E16+ AGAATTATGTGCCTCCATCTCTTCATGCCATAGAGGAAGTGTGTCACCAGGATAGAATTT
rJMFF036A24- AGAATTATGTGCCTCCATCTCTTCATGCCATAGAGGAAGTGTGTCACCAGGATAGAATTT
rJMSF031I10- AGAATTATGTGCCTCCATCTCTTCATGCCATAGAGGAAGTGTGTCACCAGGATAGAATTT
rJMFF040P06- AGAATTATGTGCCTCCATCTCTTCATGCCATAGAGGAAGTGTGTCACCAGGATAGAATTT
rJMFF004J15- AGAATTATGTGCCTCCATCTCTTCATGCCATAGAGGAAGTGTGTCACCAGGATAGAATTT
rJMSF040M21- AGAATTATGTGCCTCCATCTCTTCATGCCATAGAGGAAGTGTGTCACCAGGATAGAATTT
rJMSF038D05- AGAATTATGTGCCTCCATCTCTTCATGCCATAGAGGAAGTGTGTCACCAGGATAGAATTT
____________________________________________________________
consensus AGAATTATGTGCCTCCATCTCTTCATGCCATAGAGGAAGTGTGTCACCAGGATAGAATTT
. : . : . : . : . : . :
JMFN046G08+ CCTTTCAACGCCTTCTGAGTTTATAGTTACAGTCCG-AACAACTCCACCACTAGCACCAT
JMFN043A24+ CCTTTCAACGCCTTCTGAGTTTATAGTTACAGTCCG-AACAACTCCACCACTAGCACCAT
JMFN044E16+ CCTTTTAACGCCTTCTGAGTTTATAGTTACAGTCCG-AACAACTCCACCACTAGCACCAT
rJMFF036A24- CCTTTCAACGCCTTCTGAGTTTATAGTTACAGTCCGNAACAACTCCACCACTAGCACCAT
rJMSF031I10- CCTTTCAACGCCTTCTGAGTTTATAGTTACAGTCCG-AACAACTCCACCACTAGCACCAT
rJMFF040P06- CCTTTCAACGCCTTCTGAGTTTATAGTTACAGTCCG-AACAACTCCACCACTAGCACCAT
rJMFF004J15- CCTTTCAACGCCTTCTGAGTTTATAGTTACAGTCCG-AACAACTCCACCACTAGCACCAT
rJMSF040M21- CCTTTCAACGCCTTCTGAGTTTATAGTTACAGTCCG-AACAACTCCACCACTAGCACCAT
rJMSF038D05- CCTTTCAACGCCTTCTGAGTTTATAGTTACAGTCCG-AACAACTCCACCACTAGCACCAT
JMSF038D05+ TCTGAGTTTATAGTTACAGTCCG-AACAACTCCACCACTAGCACCAT
____________________________________________________________
consensus CCTTTCAACGCCTTCTGAGTTTATAGTTACAGTCCG-AACAACTCCACCACTAGCACCAT
. : . : . : . : . : . :
JMFN046G08+ CCCGAGCAATGGCAAGAGACACGGCCTTGACCACCAATTTCTCAGCCTCTTCACGGGTCA
JMFN043A24+ CCCGAGCAATGGCAAGAGACACGGCCTTGACCACCAATTTCTCAGCCTCTTCACGGGTCA
JMFN044E16+ CCCGAGCAATGGCAAGAGACACGGCCTTGACCACCAATTTCTCAGCCTCTTCACGGGTCA
rJMFF036A24- CCCGAGCAATGGCAAGAGACACGGCCTTGACCACCAATTTCTCAGCCTCTTCACGGGTCA
rJMSF031I10- CCCGAGCAATGGCAAGAGACACGGCCTTGACCACCAATTTCTCAGCCTCTTCACGGGTCA
rJMFF040P06- CCCGAGCAATGGCAAGAGACACGGCCTTGACCACCAATTTCTCAGCCTCTTCACGGGTCA
rJMFF004J15- CCCGAGCAATGGCAAGAGACACGGCCTTGACCACCAATTTCTCAGCCTCTTCACGGGTCA
rJMSF040M21- CCCGAGCAATGGCAAGAGACACGGCCTTGACCACCAATTTCTCAGCCTCTTCACGGGTCA
rJMSF038D05- CCCGAGCAATGGCAAGAGACACGGCCTTGACCACCAATTTCTCAGCCTCTTCACGGGTCA
JMSF040M21+ CTCTTCACGGGTCA
JMFF016G07+ GGTCA
JMSF031I10+ CCTCTTCACGGGTCA
JMFN018E05+ CGAGCAATGGCAAGAGACACGGCCTTGACCACCAATATATCAGCCTGTTCGCGGGTCA
JMSF038D05+ CCCGAGCAATGGCAAGAGACACGGCCTTGACCACCAATTTCTCAGCCTCTTCACGGGTCA
____________________________________________________________
consensus CCCGAGCAATGGCAAGAGACACGGCCTTGACCACCAATTTCTCAGCCTCTTCACGGGTCA
. : . : . : . : . : . :
JMFN046G08+ TTCCT
JMFN043A24+ TTCCT
JMFN044E16+ TTCCTTCCTTCCA
rJMFF036A24- TTCCTTCCTTCCATGCTTGATCAAAGAAGCCATACAAATAGGAAGAACCAGATC-CTCCA
rJMSF031I10- TTCCTTCCTTCCATGCTTGATCAAAGAAGCCATACAAATAGGAAGAACCAGATC-CTCCA
rJMFF040P06- TTCCTTCCTTCCATGCTTGATCAAAGAAGCCATACAAATAGGAAGAACCAGATC-CTCCA
rJMFF004J15- TTCCTTCCTTCCATGCTTGATCAAAGAAGCCATACAAATAGGAAGAACCAGATC-CTCCA
rJMSF040M21- TTCCTTCCTTCCATGCTTGATCAAAGAAGCCATACAAATAGGAAGAACCAGATC-CTCCA
rJMSF038D05- TTCCTTCCTTCCATGCTTGATCAAAGAAGCCATACAAATAGGAAGAACCAGATC-CTCCA
JMSF040M21+ TTCCTTCCTTCCATGCTTGATCAAAGAAGCCATACAAATAGGAAGAACCAGATC-CTCCA
JMFF016G07+ TTCCTTCCTTCCATGCTTGATCAAAGAAGCCATACAAATAGGAAGAACCAGATC-CTCCA
JMFF036A24+ CCAGATC-CTCCA
JMSF031I10+ TTCCTTCCTTCCATGCTTGATCAAAGAAGCCATACAAATAGGAAGAACCAGATC-CTCCA
JMFN018E05+ TTCCTTCATTCCATGCGTGATCAAAGAAGCCATGCGAATAGAAAGGTCCAGATCTCTCCA
JMSF038D05+ TTCCTTCCTTCCATGCTTGATCAAAGAAGCCATACAAATAGGAAGAACCAGATC-CTCCA
JMFF004J15+ CA
____________________________________________________________
consensus TTCCTTCCTTCCATGCTTGATCAAAGAAGCCATACAAATAGGAAGAACCAGATC-CTCCA
. : . : . : . : . : . :
rJMFF036A24- ATTGCAAAAGGCTGCTCCAATACTGTGCCTCCAAGGGGCACCCCATATATTTTGCCACCT
rJMSF031I10- ATTGCAAAAGGCTGCTCCAATACTGTGCCTCCAAGGGGCACCCCATATATTTTGCCACCT
rJMFF040P06- ATTGCAAAAGGCTGCTCCAATACTGTGCCTCCAAGGGGCACCCCATATATTTTGCCACCT
rJMFF004J15- ATTGCAAAAGGCTGCTCCAATACTGTGCCTCCAAGGGGCACCCCATATATTTTGCCACCT
rJMSF040M21- ATTGCAAAAGGCTGCTCCAATACTGTGCCTCCAAGGGGCACCCCATATATTTTGCCACCT
rJMSF038D05- ATTGCAAAAGGCTGCTCCAATACTGTGCCTCCAAGGGGCACCCCATATATTTTGCCACCT
JMSF040M21+ ATTGCAAAAGGCTGCTCCAATACTGTGCCTCCAAGGGGCACCCCATATATTTTGCCACCT
JMFF016G07+ ATTGCAAAAGGCTGCTCCAATACTGTGCCTCCAAGGGGCACCCCATATATTTTGCCACCT
JMFF036A24+ ATTGCAAAAGGCTGCTCCAATACTGTGCCTCCAAGGGGCACCCCATATATTTTGCCACCT
JMSF031I10+ ATTGCAAAAGGCTGCTCCAATACTGTGCCTCCAAGGGGCACCCCATATATTTTGCCACCT
JMFN018E05+ ATTGCAAAAGGTTGCTCCAATCCTGTGCCTCCAAGGGGCACCCCATATATTTTGCCACCT
JMSF038D05+ ATTGCAAAAGGCTGCTCCAATACTGTGCCTCCAAGGGGCACCCCATATATTTTGCCACCT
JMFF004J15+ ATTGCAAAAGGCTGCTCCAATACTGTGCCTCCAAGGGGCACCCCATATATTTTGCCACCT
____________________________________________________________
consensus ATTGCAAAAGGCTGCTCCAATACTGTGCCTCCAAGGGGCACCCCATATATTTTGCCACCT
. : . : . : . : . : . :
rJMFF036A24- TCGTGTTTGTCCCACCCACCAACAATAAGACCAGTTTGTAGCATATTCTTGTTATTGTAN
rJMSF031I10- TCGTGTTTGTCCCACCCACCAACAATAAGACCAGTTTGTAGCATATTCTTGTTATTGTAG
rJMFF040P06- TCGTGTTTGTCCCACCCACCAACAATAAGACCAGTTTGTAGCATATTCTTGTTATTGTAG
rJMFF004J15- TCGTGTTTGTCCCACCCACCAACAATAAGACCAGTTTGTAGCATATTCTTGTTATTGTAG
rJMSF040M21- TCGTGTTTGTCCCACCCACCAACAATAAGACCAGTTTGTAGCATATTCTTGTTATTGTAG
rJMSF038D05- TCGTGTTTGTCCCACCCACCAACAATAAGACCAGTTTGTAGCATATTCTTGTTATTGTAG
JMSF040M21+ TCGTGTTTGTCCCACCCACCAACAATAAGACCAGTTTGTAGCATATTCTTGTTATTGTAG
JMFF016G07+ TCGTGTTTGTCCCACCCACCAACAATAAGACCAGTTTGTAGCATATTCTTGTTATTGTAG
JMFF036A24+ TCGTGTTTGTCCCACCCACCAACAATAAGACCAGTTTGTAGCATATTCTTGTTATTGTAG
JMSF031I10+ TCGTGTTTGTCCCACCCACCAACAATAAGACCAGTTTGTAGCATATTCTTGTTATTGTAG
JMFN018E05+ TGGTGTTTGTCCCACCCACCAGCAATAAGACCAGTTTGTAGCATATTCTTGTTATTGTAG
JMSF038D05+ TCGTGTTTGTCCCACCCACCAACAATAAGACCAGTTTGTAGCATATTCTTGTTATTGTAG
JMFF004J15+ TCGTGTTTGTCCCACCCACCAACAATAAGACCAGTTTGTAGCATATTCTTGTTATTGTAG
____________________________________________________________
consensus TCGTGTTTGTCCCACCCACCAACAATAAGACCAGTTTGTAGCATATTCTTGTTATTGTAG
. : . : . : . : . : . :
rJMFF036A24- GCTAATAATCTGACCAGGTTTGCAGCAACCTTGACAGTTGCAGGCTGCCCAAGTTGTATC
rJMSF031I10- GCTAATAATCTGACCAGGTTTGCAGCAACCTTGACAGTTGCAGGCTGCCCAAGTTGTATC
rJMFF040P06- GCTAATAATCTGACCAGGTTTGCAGCAACCTTGACAGTTGCAGGCTGCCCAAGTTGTATC
rJMFF004J15- GCTAATAATCTGACCAGGTTTGCAGCAACCTTGACAGTTGCAGGCTGCCCAAGTTGTATC
rJMSF040M21- GCTAATAATCTGACCAGGTTTGCAGCAACCTTGACAGTTGCAGGCTGCCCAAGTTGTATC
rJMSF038D05- GCTAATAATCTGACCAGGTTTGCAGCAACCTTGACAGTTGCAGGCTGCCCAAGTTGTATC
JMSF040M21+ GCTAATAATCTGACCAGGTTTGCAGCAACCTTGACAGTTGCAGGCTGCCCAAGTTGTATC
JMFF016G07+ GCTAATAATCTGACCAGGTTTGCAGCAACCTTGACAGTTGCAGGCTGCCCAAGTTGTATC
JMFF036A24+ GCTAATAATCTGACCAGGTTTGCAGCAACCTTGACAGTTGCAGGCTGCCCAAGTTGTATC
JMSF031I10+ GCTAATAATCTGACCAGGTTTGCAGCAACCTTGACAGTTGCAGGCTGCCCAAGTTGTATC
JMFN018E05+ GCTAATAATGTGACCAGGTTTGCAGCAACCTTGACAGTTGCAGGCTGCCCCAGTTGTATC
JMSF038D05+ GCTAATAATCTGACCAGGTTTGCAGCAACCTTGACAGTTGCAGGCTGCCCAAGTTGTATC
JMFF004J15+ GCTAATAATCTGACCAGGTTTGCAGCAACCTTGACAGTTGCAGGCTGCCCAAGTTGTATC
____________________________________________________________
consensus GCTAATAATCTGACCAGGTTTGCAGCAACCTTGACAGTTGCAGGCTGCCCAAGTTGTATC
. : . : . : . : . : . :
rJMFF036A24- GTGTGTTGGTGGAGAAAGTAACGAACATAGTCTGAAACAATTTGCGAATCTGCAGC
rJMSF031I10- GTGTGTTGGTGGAGAAAGTAACGAACATAGTCTGAAACAATTTGCGAATCTGCAGCCGA
rJMFF040P06- GTGTGTTGGTGGAGAAAGTAACGAACATAGTCTGAAACAATTTGCGAATCTGCAGCCGAA
rJMFF004J15- GTGTGTTGGTGGAGAAAGTAACGAACATAGTCTGAAACAATTTGCGAATCTGCAGCCGAA
rJMSF040M21- GTGTGTTGGTGGAGAAAGTAACGAACATAGTCTGAAACAATTTGCGAATCTGCAGCCGAA
rJMSF038D05- GTGTGTTGGTGGAGAAAGTAACGAACATAGTCTGAAACAATTTGCGAATCTGCAGCCGAA
JMSF040M21+ GTGTGTTGGTGGAGAAAGTAACGAACATAGTCTGAAACAATTTGCGAATCTGCAGCCGAA
JMFF016G07+ GTGTGTTGGTGGAGAAAGTAACGAACATAGTCTGAAACAATTTGCGAATCTGCAGCCGAA
JMFF036A24+ GTGTGTTGGTGGAGAAAGTAACGAACATAGTCTGAAACAATTTGCGAATCTGCAGCCGAA
JMSF031I10+ GTGTGTTGGTGGAGAAAGTAACGAACATAGTCTGAAACAATTTGCGAATCTGCAGCCGAA
JMFN018E05+ GTGTGCTGGTGTAGAAAGTAACGTACATAGTCTGAAACAATTTGGGAATGTGCAGCCATA
JMSF038D05+ GTGTGTTGGTGGAGAAAGTAACGAACATAGTCTGAAACAATTTGCGAATCTGCAGCCGAA
JMFF004J15+ GTGTGTTGGTGGAGAAAGTAACGAACATAGTCTGAAACAATTTGCGAATCTGCAGCCGAA
____________________________________________________________
consensus GTGTGTTGGTGGAGAAAGTAACGAACATAGTCTGAAACAATTTGCGAATCTGCAGCCGAA
. : . : . : . : . : . :
rJMFF040P06- CCAGAGCGACNAACGTA
rJMFF004J15- CCCGAGCGACAAACGTAAACATTGTCGGTGA
rJMSF040M21- CCCGAGCGACAAACGTAGACATTGTCGGTGAGCTTAGTGATCTTATCTGATGCCCTATTC
rJMSF038D05- CCCGAGCGACAAACGTAGACATTGTCGGTGAGCTTAGTGATCTTATCTGATGCCCTATTC
JMSF040M21+ CCCGAGCGACAAACGTAGACATTGTCGGTGAGCTTAGTGATCTTATCTGATGCCCTATTC
JMFF016G07+ CCCGAGCGACAAACGTAGACATTGTCGGTGAGCTTAGTGATCTTATCTGATGCCCTATTC
JMFF036A24+ CCCGAGCGACAAACGTAGACATTGTCGGTGAGCTTAGTGATCTTATCTGATGCCCTATTC
JMSF031I10+ CCCGAGCGACAAACGTAGACATTGTCGGTGAGCTTAGTGATCTTATCTGATGCCCTATTC
JMFN018E05+ CCCGAGCGACAAACGTAGGCATTGTCGGTGAGCTTAGTGATCTTATTTGATGCCCTATTC
JMSF038D05+ CCCGAGCGACAAACGTAGACATTGTCGGTGAGCTTAGTGATCTTATCTGATGCCCTATTC
JMFF004J15+ CCCGAGCGACAAACGTAGACATTGTCGGTGAGCTTAGTGATCTTATCTGATGCCCTATTC
____________________________________________________________
consensus CCCGAGCGACAAACGTAGACATTGTCGGTGAGCTTAGTGATCTTATCTGATGCCCTATTC
. : . : . : . : . : . :
rJMSF040M21- GCCACATACATTCCTGTGCTGGTACGAGAATCGGCACC
rJMSF038D05- GCCACATACATTCCTGTGCTGGTACGAGAATCGGCACCGAGGACGACACCACCGTTGTAG
JMSF040M21+ GCCACATACATTCCTGTGCTGGTACGAGAATCGGCACCGAGGACGACACCACCGTTGTAG
JMFF016G07+ GCCACATACATTCCTGTGCTGGTACGAGAATCGGCACCGAGGACGACACCACCGTTGTAG
JMFF036A24+ GCCACATACATTCCTGTGCTGGTACGAGAATCGGCACCGAGGACGACACCACCGTTGTAG
JMSF031I10+ GCCACATACATTCCTGTGCTGGTACGAGAATCGGCACCGAGGACGACACCACCGTTGTAG
JMFN018E05+ GCCACATACATTCCTGTGCTGGTAGGAGAATCGGCGCCGAGGATGACACCACCGTTGTAG
JMSF038D05+ GCCACATACATTCCTGTGCTGGTACGAGAATCGGCACCGAGGACGACACCACCGTTGTAG
JMFF004J15+ GCCACATACATTCCTGTGCTGGTACGAGAATCGGCACCGAGGACGACACCACCGTTGTAG
____________________________________________________________
consensus GCCACATACATTCCTGTGCTGGTACGAGAATCGGCACCGAGGACGACACCACCGTTGTAG
. : . : . : . : . : . :
rJMSF038D05- GTGACGCCGATAATGGTGGTCCCCATCGAGTGAGGCGAGTCTAATCCGTTGAGCAAAGTC
JMSF040M21+ GTGACGCCGATAATGGTGGTCCCCATCGAGTGAGGCGAGTCTAATCCGTTGAGCAAAGTC
JMFF016G07+ GTGACGCCGATAATGGTGGTCCCCATCGAGTGAGGCGAGTCTAATCCGTTGAGCAAAGTC
JMFF036A24+ GTGACGCCGATAATGGTGGTCCCCATCGAGTGAGGCGAGTCTAATCCGTTGAGCAAAGTC
JMSF031I10+ GTGACGCCGATAATGGTGGTCCCCATCGAGTGAGGCGAGTCTAATCCGTTGAGCAAAGTC
JMFN018E05+ GTGACGCCGATAATGCTGGTCCCCATCGAGTGAGGCGAGTCTAATCCGTTGAGCAAAGTC
JMSF038D05+ GTGACGCCGATAATGGTGGTCCCCATCGAGTGAGGCGAGTCTAATCCGTTGAGCAAAGTC
JMFF004J15+ GTGACGCCGATAATGGTGGTCCCCATCGAGTGAGGCGAGTCTAATCCGTTGAGCAAAGTC
____________________________________________________________
consensus GTGACGCCGATAATGGTGGTCCCCATCGAGTGAGGCGAGTCTAATCCGTTGAGCAAAGTC
. : . : . : . : . : . :
rJMSF038D05- GCGTCCATTCTTACAATTGCTT
JMSF040M21+ GCGTCCATTCTTACAATTGCTTCAACTTCAACTGTTGAGAGAAGAAGGATCGAAACTAGC
JMFF016G07+ GCGTCCATTCTTACAATTGCTTCAACTTCAACTGTTGAGAGAAGAAGGATCGAAACTAGC
JMFF036A24+ GCGTCCATTCTTACAATTGCTTCAACTTCAACTGTTGAGAGAAGAAGGATCGAAACTAGC
JMSF031I10+ GCGTCCATTCTTACAATTGCTTCAACTTCAACTGTTGAGAGAAGAAGGATCGAAACTAGC
JMFN018E05+ GCGTCCATTTTTACAATTGCTTCAACTTCAAC
JMSF038D05+ GCGTCCATTCTTACAATTGCTTCAACTTCAACTGTTGAGAGAAGAAGGATCGAAACTAGC
JMFF004J15+ GCGTCCATTCTTACAATTGCTTCAACTTCAACTGTTGAGAGAAGAAGGATCGAAACTAGC
____________________________________________________________
consensus GCGTCCATTCTTACAATTGCTTCAACTTCAACTGTTGAGAGAAGAAGGATCGAAACTAGC
. : . : . : . : . : . :
JMSF040M21+ TAAAGTTTGATGGAAGAAGTGATAACCG
JMFF016G07+ TAAAGTTTGATGGAAGAAGTGAT
JMFF036A24+ TAAAGTTTGATGGAAGAAGTGAT
JMSF031I10+ TAAAGTTTGATGGAAGAAGTGATAACCG
JMSF038D05+ TAAAGTTTGATGGAAGAAGTGATAACCG
JMFF004J15+ TAAAGTTTGATGGAAGAAGTGATAACCGAGCCCTAGGGGCAAAATCCGGAATGATGACTT
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consensus TAAAGTTTGATGGAAGAAGTGATAACCGAGCCCTAGGGGCAAAATCCGGAATGATGACTT