| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMCP015E03 | Sequence | 609 | 007283 (4) | gb|ACB32231.1| | 2e-87 | nascent polypeptide associated complex alpha [Solanum chacoense] | |||||
| JMFF004B07 | Sequence | 472 | 007283 (4) | ref|XP_010067669.1| | 6e-21 | PREDICTED: nascent polypeptide-associated complex subunit alpha-like protein 1 | 675 | 007283 (4) | gb|ACB32231.1| | 7e-81 | nascent polypeptide associated complex alpha [Solanum chacoense] |
| JMFF026H08 | Sequence | 575 | 016285 | ref|YP_008992291.1| | 4e-04 | hypothetical protein Salmi_Mp025 (mitochondrion) [Salvia miltiorrhiza] gb|AGU165 | 694 | 007283 (4) | gb|ACB32231.1| | 2e-83 | nascent polypeptide associated complex alpha [Solanum chacoense] |
This contig is upended
. : . : . : . : . : . :
rJMFF026H08- TACGCACGCACAGTTTCATACATAATTGATGCTCTGTATCAGACACTGACAAGAAGTAT
____________________________________________________________
consensus TACGCACGCACAGTTTCATACATAATTGATGCTCTGTATCAGACACTGACAAGAAGTAT
. : . : . : . : . : . :
rJMFF026H08- CCAAATCTCCTGAGTTGAAGGGCAATATTGCATATTAATGAAAATGATGATTCTCGAAAG
____________________________________________________________
consensus CCAAATCTCCTGAGTTGAAGGGCAATATTGCATATTAATGAAAATGATGATTCTCGAAAG
. : . : . : . : . : . :
rJMFF026H08- ATATGGAAATCAAAGAGATGGTTTCTAGTTTGTAAGTTCCATAATGGCAGAGACGATATC
rJMCP015E03+ TTTCTAGTTTGTAAGTTCCATAATGGCAGAGACGATATC
rJMFF004B07- TTTCTAGTTTGTAAGTTCCATAATGGCAGAGACGATATC
____________________________________________________________
consensus ATATGGAAATCAAAGAGATGGTTTCTAGTTTGTAAGTTCCATAATGGCAGAGACGATATC
. : . : . : . : . : . :
rJMFF026H08- CCCATCGACAGCCTTTAGAGCTTTGACCGCCTTTGCCCTGGAAACCCCAGCTTGGGTCAT
rJMCP015E03+ CCCATCGACAGCCTTTAGAGCTTTGACCGCCTTTGCCCTGGAAACCCCAGCTTGGGTCAT
rJMFF004B07- CCCATCGACAGCCTTTAGAGCTTTGACCGCCTTTGCCCTGGAAACCCCAGCTTGGGTCAT
____________________________________________________________
consensus CCCATCGACAGCCTTTAGAGCTTTGACCGCCTTTGCCCTGGAAACCCCAGCTTGGGTCAT
. : . : . : . : . : . :
rJMFF026H08- CACCAACTCTATATCCTTGGGTTCTACACCTGTCTCATCTACATCCTCATCATCTTGAGC
rJMCP015E03+ CACCAACTCTATATCCTTGGGTTCTACACCTGTCTCATCTACATCCTCATCATCTTGAGC
rJMFF004B07- CACCAACTCTATATCCTTGGGTTCTACACCTGTCTCATCTACATCCTCATCATCTTGAGC
____________________________________________________________
consensus CACCAACTCTATATCCTTGGGTTCTACACCTGTCTCATCTACATCCTCATCATCTTGAGC
. : . : . : . : . : . :
rJMFF026H08- TGCAGTTGATGGCTCGGGCTTTGATATGACATCGCTAATGTTAGGAGCCTTGAACTGTTC
rJMCP015E03+ TGCAGTTGATGGCTCGGGCTTTGATATGACATCGCTAATGTTAGGAGCCTTGAACTGTTC
rJMFF004B07- TGCAGTTGATGGCTCGGGCTTTGATATGACATCGCTAATGTTAGGAGCCTTGAACTGTTC
____________________________________________________________
consensus TGCAGTTGATGGCTCGGGCTTTGATATGACATCGCTAATGTTAGGAGCCTTGAACTGTTC
. : . : . : . : . : . :
rJMFF026H08- AGCAGCTTGAGTTTGCAGTTGCGAGCTTAAATCCTCAATCTTAGCCTCACCAAAAATAAC
rJMCP015E03+ AGCAGCTTGAGTTTGCAGTTGCGAGCTTAAATCCTCAATCTTAGCCTCACCAAAAATAAC
rJMFF004B07- AGCAGCTTGAGTTTGCAGTTGCGAGCTTAAATCCTCAATCTTAGCCTCACCAAAAATAAC
____________________________________________________________
consensus AGCAGCTTGAGTTTGCAGTTGCGAGCTTAAATCCTCAATCTTAGCCTCACCAAAAATAAC
. : . : . : . : . : . :
rJMFF026H08- GTAGGTGTCTGAGTTGGGGCTCTTGAAAACATCCGGTTTTGAGATGATGAATAGTATATT
rJMCP015E03+ GTAGGTGTCTGAGTTGGGGCTCTTGAAAACATCCGGTTTTGAGATGATGAATAGTATATT
rJMFF004B07- GTAGGTGTCTGAGTTGGGGCTCTTGAAAACATCCGGTTTTGAGATGATGAATAGTATATT
JMFF004B07+ TCTGAGTTGGGGCTCTTGAAAACATCCGGTTTTGAGATGATGAATAGTATATT
____________________________________________________________
consensus GTAGGTGTCTGAGTTGGGGCTCTTGAAAACATCCGGTTTTGAGATGATGAATAGTATATT
. : . : . : . : . : . :
rJMFF026H08- CTTGCTCTTCTTGACAGTGACCCGACTGACACCAAGGATAGGCTTCATTCCCAGCTTTAG
rJMCP015E03+ CTTGCagaTgTTctgtcactCCCGACTGACACCAAGGATAGGCTTCATTCCCAGCTTTAG
rJMFF004B07- CTTGCTCTTCTTGACAGTGACCCGACTGACACCAAGGATAGGCTTCATTCCCAGCTTTAG
JMFF004B07+ CTTGCTCTTCTTGACAGTGACCCGACTGACACCAAGGATAGGCTTCATTCCCAGCTTTAG
____________________________________________________________
consensus CTTGCTCTTCTTGACAGTGACCCGACTGACACCAAGGATAGGCTTCATTCCCAGCTTTAG
. : . : . : . : . : . :
rJMFF026H08- CATAGCTTTACGACTCTTCTTCTCACTCCT-GCTCTGCTTTGACCTACCAGTACCATCTC
rJMCP015E03+ CATAGCTTTACGACTCTagaagagtgaggaccgagTGCTTTGACCTACCAGTACCATCTC
rJMFF004B07- CATAGCTTTACGACTCTTCTTCTCACTCCT-GCTCTGCTTTGACCTACCAGTACCATCTC
JMFF004B07+ CATAGCTTTACGACTCTTCTTCTCACTCCT-GCTCTGCTTTGACCTACCAGTACCATCTC
____________________________________________________________
consensus CATAGCTTTACGACTCTTCTTCTCACTCCT-GCTCTGCTTTGACCTACCAGTACCATCTC
. : . : . : . : . : . :
rJMFF026H08- CATGTTCT
rJMCP015E03+ CATGTTCTTCATCTTCATCTTTTTCATCACCTTCATCATCATCATCGTCTTCATCATC
rJMFF004B07- CATGTTCTTCATCTTCATCTTTTTCATCACCTTCATCATCATCATCGTCTTCATCATC
JMFF004B07+ CATGTTCTTCATCTTCATCTTTTTCATCACCTTCATCATCATCATCGTCTTCATCATCAT
____________________________________________________________
consensus CATGTTCTTCATCTTCATCTTTTTCATCACCTTCATCATCATCATCGTCTTCATCATCAT
. : . : . : . : . : . :
JMFF004B07+ CGTCGTCCTCAATAATTGGGTCCTCAGACTCGATCTTCTGCTGTTCGAGATGAGCAGCCA
____________________________________________________________
consensus CGTCGTCCTCAATAATTGGGTCCTCAGACTCGATCTTCTGCTGTTCGAGATGAGCAGCCA
. : . : . : . : . : . :
JMFF004B07+ GGATCTCTTCTTGCGATTGAGCAGTCATTTTTGGGGATAGTTGATCGAGAGCAGCTGACA
____________________________________________________________
consensus GGATCTCTTCTTGCGATTGAGCAGTCATTTTTGGGGATAGTTGATCGAGAGCAGCTGACA
. : . : . : . : . : . :
JMFF004B07+ GAAACAATGGCTCCTGTAACCCTAGCGGTAAGAGAGAGGACGATTAACAAGGGCTCCTAT
____________________________________________________________
consensus GAAACAATGGCTCCTGTAACCCTAGCGGTAAGAGAGAGGACGATTAACAAGGGCTCCTAT
. : . : . : . : . : . :
JMFF004B07+ AACCCTAGCGGGCGGTAAGAGGGTATGTTTGGTTCACTAGAAAATATTTTCTCTGAATTT
____________________________________________________________
consensus AACCCTAGCGGGCGGTAAGAGGGTATGTTTGGTTCACTAGAAAATATTTTCTCTGAATTT