| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF002P05 | Sequence | 488 | 007279 (5) | ref|XP_009594479.1| | 1e-51 | PREDICTED: long-chain-alcohol oxidase FAO2 [Nicotiana tomentosiformis] | |||||
| JMFS129C03 | Sequence | 572 | 007279 (5) | ref|XP_009594479.1| | 4e-69 | PREDICTED: long-chain-alcohol oxidase FAO2 [Nicotiana tomentosiformis] | |||||
| JMSF020M06 | Sequence | 674 | 007279 (5) | ref|XP_009594479.1| | 2e-79 | PREDICTED: long-chain-alcohol oxidase FAO2 [Nicotiana tomentosiformis] | 771 | 009993 (4) | ref|XP_009764096.1| | 2e-114 | PREDICTED: long-chain-alcohol oxidase FAO2 [Nicotiana sylvestris] |
| JMSF027F03 | Sequence | 660 | 007279 (5) | ref|XP_009594479.1| | 1e-77 | PREDICTED: long-chain-alcohol oxidase FAO2 [Nicotiana tomentosiformis] | 780 | 009993 (4) | ref|XP_009764096.1| | 2e-112 | PREDICTED: long-chain-alcohol oxidase FAO2 [Nicotiana sylvestris] |
| JMSF045C24 | Sequence | 663 | 007279 (5) | ref|XP_009594479.1| | 1e-77 | PREDICTED: long-chain-alcohol oxidase FAO2 [Nicotiana tomentosiformis] | 773 | 009993 (4) | ref|XP_009764096.1| | 9e-119 | PREDICTED: long-chain-alcohol oxidase FAO2 [Nicotiana sylvestris] |
This contig is upended
. : . : . : . : . : . :
JMSF020M06+ GGTACCATTTTCATT
JMSF045C24+ T
JMSF027F03+ T
____________________________________________________________
consensus GGTACCATTTTCATT
. : . : . : . : . : . :
JMSF020M06+ TATGGTTTCAATGATACCCTTTTCTAATGGCCTCCCTGTCTGTTGGTCTGGGGGAACTTC
JMSF045C24+ TATGGTTTCAATGATACCCTTTTNTAATGGCCTTCCTGTCTGTTGGTCTGGGGGAACTTC
JMFS129C03+ GGTCTGGGGGAACTTC
JMSF027F03+ TATGGTTTCAATGATACCCTTTTCTAATGGCCTTCCTGTCTGTTGGTCTGGGGGAACTTC
____________________________________________________________
consensus TATGGTTTCAATGATACCCTTTTCTAATGGCCTTCCTGTCTGTTGGTCTGGGGGAACTTC
. : . : . : . : . : . :
JMSF020M06+ ATTGGTGTCTACATGGAAGCCAATTGCTTCCCATGCCGGATTATTATAATTTTCATCAGT
JMSF045C24+ ATTGGTGTCTACATGGAAGCCAATTGCTTCCCATGCCGGATTATTATAATTTTCATCAGT
JMFS129C03+ ATTGGTGTCTACATGGAAGCCAATGNCTTCCCATGCCGGATTATTATAATTTTCATCAGT
JMSF027F03+ ATTGGTGTCTACATGGAAGCCAATTGCTTCCCATGCCGGATTATTATAATTTTCATCAGT
____________________________________________________________
consensus ATTGGTGTCTACATGGAAGCCAATTGCTTCCCATGCCGGATTATTATAATTTTCATCAGT
. : . : . : . : . : . :
JMSF020M06+ CCATGAGAAGTAAATGAAATAGCAGGCAATTTTGATGGTCATGAACACAATTCTTAGAGG
JMSF045C24+ CCATGAGAAGTAAATGAAATAGCAGGCAATTTTGATGGTCATGAACACAATTCTTAGAGG
JMFS129C03+ CCATGAGAAGTAAATGAAATAGCAGGCAATTTTGATGGTCATGAACACAATTCTTAGAGG
JMSF027F03+ CCATGAGAAGTAAATGAAATAGCAGGCAATTTTGATGGTCATGAACACAATTCTTAGAGG
JMFF002P05+ CTTAGAGG
____________________________________________________________
consensus CCATGAGAAGTAAATGAAATAGCAGGCAATTTTGATGGTCATGAACACAATTCTTAGAGG
. : . : . : . : . : . :
JMSF020M06+ AAGTATAAGGGTTTCCCTTGACCATTTCAGGAGAATGGCTTCTCTTCGCTTCAAGGGTAA
JMSF045C24+ AAGTATAAGGGTTTCCCTTGACCATTTCAGGAGAATGGCTTCTCTTCGCTTCAAGGGTAA
JMFS129C03+ AAGTATAAGGGTTTCCCTTGACCATTTCAGGAGAATGGCTTCTCTTCGCTTCAAGGGTAA
JMSF027F03+ AAGTATAAGGGTTTCCCTTGACCATTTCAGGAGAATGGCTTCTCTTCGCTTCAAGGGTAA
JMFF002P05+ AAGTATAAGGGTTTCCCTTGACCATTTCAGGAGAATGGCTTCTCTTCGCTTCAAGGGTAA
____________________________________________________________
consensus AAGTATAAGGGTTTCCCTTGACCATTTCAGGAGAATGGCTTCTCTTCGCTTCAAGGGTAA
. : . : . : . : . : . :
JMSF020M06+ CTCAGAGAAGTTGTGAATGAAGGGCCATCTTCCATCAAAGCAAACAAACCCACAAAGAAG
JMSF045C24+ CTCAGAGAAGTTGTGAATGAAGGGCCATCTTCCATCAAAGCAAACAAACCCACAAAGAAG
JMFS129C03+ CTCAGAGAAGTTGTGAATGAAGGGCCATTTTCCATCAAAGCAAACAAACCCACAAAGAAG
JMSF027F03+ CTCAGAGAAGTTGTGAATGAAGGGCCATCTTCCATCAAAGCAAACAAACCCACAAAGAAG
JMFF002P05+ CTCAGAGAAGTTGTGAATGAAGGGCCATCTTCCATCAAAGCAAACAAACCCACAAAGAAG
____________________________________________________________
consensus CTCAGAGAAGTTGTGAATGAAGGGCCATCTTCCATCAAAGCAAACAAACCCACAAAGAAG
. : . : . : . : . : . :
JMSF020M06+ AAGACTACCCAGTCTGGTAGATAGAATAATCAGAACCAATCTGAATATAAACACTGCATC
JMSF045C24+ AAGACTACCCAGTCTGGTAGATAGAATAATCAGAACCAATCTGAATATAAACACTGCATC
JMFS129C03+ AAGACTACCCAGTCTGGTAGATAGAATAATCAGAACCAATCTGAATATAAACACTGCATC
JMSF027F03+ AAGACTACCCAGTCTGGTAGATAGAATAATCAGAACCAATCTGAATATAAACACTGCATC
JMFF002P05+ AAGACTACCCAGTCTGGTAGATAGAATAATCAGAACCAATCTGAATATAAACACTGCATC
____________________________________________________________
consensus AAGACTACCCAGTCTGGTAGATAGAATAATCAGAACCAATCTGAATATAAACACTGCATC
. : . : . : . : . : . :
JMSF020M06+ AGGTAAGAACCTCCTCATCACCACCTCTGCTACCTCATCAGGGAAAGGAGGCTGAGAGGC
JMSF045C24+ AGGTAAGAACCTCCTCATCACCACCTCTGCTACCTCATCAGGGAAAGGAGGCTGAGAGGC
JMFS129C03+ AGGTAAGAACCTCCTCATCACCACCTCTGCTACCTCATCAGGGAAAGGAGGCTGAGAGGC
JMSF027F03+ AGGTAAGAACCTCCTCATCACCACCTCTGCTACCTCATCAGGGAAAGGAGGCTGAGAGGC
JMFF002P05+ AGGTAAGAACCTCCTCATCACCACCTCTGCTACCTCATCAGGGAAAGGAGGCTGAGAGGC
____________________________________________________________
consensus AGGTAAGAACCTCCTCATCACCACCTCTGCTACCTCATCAGGGAAAGGAGGCTGAGAGGC
. : . : . : . : . : . :
JMSF020M06+ TGAAGAGCTGTAGAAGGAACACATAGCTTCATCATCGGAATCTTGAGGGAGTGGAATGGG
JMSF045C24+ TGAAGAGCTGTAGAAGGAACACATAGCTTCATCATCGGAATCTTGAGGGAGTGGAATGGG
JMFS129C03+ TGAAGAGCTGTAGAAGGAACACATAGCTTCATCATCGGAATCTTGAGGGAGTGGAATGGG
JMSF027F03+ TGAAGAGCTGTAGAAGGAACACATAGCTTCATCATCGGAATCTTGAGGGAGTGGAATGGG
JMFF002P05+ TGAAGAGCTGTAGAAGGAACACATAGCTTCATCATCGGAATCTTGAGGGAGTGGAATGGG
____________________________________________________________
consensus TGAAGAGCTGTAGAAGGAACACATAGCTTCATCATCGGAATCTTGAGGGAGTGGAATGGG
. : . : . : . : . : . :
JMSF020M06+ AGGTATGAGAGCTTCGCAAATAGCAGCTAAAGCTTGATACTGAGATGAAGACAGGCCATG
JMSF045C24+ AGGTATGAGAGCTTCGCAAATAGCAGCTAAAGCTTGATACTGAGATGAAGACAGGCCATG
JMFS129C03+ AGGTATGAGAGCTTCGCAAATAGCAGCTAAAGCTTGATACTGAGATGAAGACAGGCCATG
JMSF027F03+ AGGTATGAGAGCTTCGCAAATAGCAGCTAAAGCTTGATACTGAGATGAAGACAGGCCATG
JMFF002P05+ AGGTATGAGAGCTTCGCAAATAGCAGCTAAAGCTTGATACTGAGATGAAGACAGGCCATG
____________________________________________________________
consensus AGGTATGAGAGCTTCGCAAATAGCAGCTAAAGCTTGATACTGAGATGAAGACAGGCCATG
. : . : . : . : . : . :
JMSF020M06+ ATTATAGCTGTTTCTCCTTCCTCCTCTCAACAATGGATGGCATTTTCTTTCATTCATCTT
JMSF045C24+ ATTATAGCTGTTTCTCCTTCCTCCTCTCAACAATGGATGGCATTTTCTTTCATTCATCTT
JMFS129C03+ ATTATAGCTGTTTCTCCTTCCTCCTCTCAACAATGGATGGCATTTTCTTTCATTCATCTT
JMSF027F03+ ATTATAGCTGTTTCTCCTTCCTCCTCTCAACAATGGATGGCATTTTCTTTCATTCATCTT
JMFF002P05+ ATTATAGCTGTTTCTCCTTCCTCCTCTCAACAATGGATGGCATTTTCTTTCATTCATCTT
____________________________________________________________
consensus ATTATAGCTGTTTCTCCTTCCTCCTCTCAACAATGGATGGCATTTTCTTTCATTCATCTT
. : . : . : . : . : . :
JMSF020M06+ TTTCTCTCTCTTGAAAATCTTTTCCCCCTCTCTCTCTCTTTCTCTTTGCTTTGCGG
JMSF045C24+ TTTCTCTCTCTTGAAAATCTTTTCCCCCTCTCTCTCTCTTTCTCTTTGCTTTGCGG
JMFS129C03+ TTTCTCTCTCTTGAAA
JMSF027F03+ TTTCTCTCTCTTGAAAATCTTTTCCCCCTCTCTCTCTCTTTCTCTTTGCTTTGCGG
JMFF002P05+ TTTCTCTCTCTTGAAAATCTTTTCCCCCTCTCTCTCTCTTTCTCTTTGCTTTGCGGTTAT
____________________________________________________________
consensus TTTCTCTCTCTTGAAAATCTTTTCCCCCTCTCTCTCTCTTTCTCTTTGCTTTGCGGTTAT