Contig 007276:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF002J17Sequence509007276 (2)677007276 (2)

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF002J17- GTTTTCTTAT
                      ____________________________________________________________
consensus GTTTTCTTAT
 
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rJMFF002J17- AATTTTGTTATGAAAGAGTAAATAACAGGCCAGAGTGATTAGGCTTTCAGTAGACATTTG
                      ____________________________________________________________
consensus AATTTTGTTATGAAAGAGTAAATAACAGGCCAGAGTGATTAGGCTTTCAGTAGACATTTG
 
. : . : . : . : . : . :
rJMFF002J17- GGAAATTATTTTAAGATAGGAATTTATTGTACATATAACATATATATATGTATAGTGAGT
                      ____________________________________________________________
consensus GGAAATTATTTTAAGATAGGAATTTATTGTACATATAACATATATATATGTATAGTGAGT
 
. : . : . : . : . : . :
rJMFF002J17- TTCACTTCACTTCTCTGATGCGTCTGAAAGATTTTANGGTTGGAAAAGAGTTCAATCGTC
                      ____________________________________________________________
consensus TTCACTTCACTTCTCTGATGCGTCTGAAAGATTTTANGGTTGGAAAAGAGTTCAATCGTC
 
. : . : . : . : . : . :
rJMFF002J17- GAGACCCTTGAGTTCCCAGCTGTCCATCATCTTCTCATGATGATCATAGGCCATGGGACG
                      ____________________________________________________________
consensus GAGACCCTTGAGTTCCCAGCTGTCCATCATCTTCTCATGATGATCATAGGCCATGGGACG
 
. : . : . : . : . : . :
rJMFF002J17- ACGCATATGGGGGGGAGTAACAATGTGAGTTTCAGTTCCATAGCCACCACTCATCATCTT
                      ____________________________________________________________
consensus ACGCATATGGGGGGGAGTAACAATGTGAGTTTCAGTTCCATAGCCACCACTCATCATCTT
 
. : . : . : . : . : . :
rJMFF002J17- ATCCATAGAGAACTTATTATGCCCATACCCATCTCTATACTTGCCTTCATTGAACTTATG
                      ____________________________________________________________
consensus ATCCATAGAGAACTTATTATGCCCATACCCATCTCTATACTTGCCTTCATTGAACTTATG
 
. : . : . : . : . : . :
rJMFF002J17- CCCATAGACATCTTTGTCATGGCTTTCGTAACCGCCATAGCCATCTTGGTACCTTTCCTT
                      ____________________________________________________________
consensus CCCATAGACATCTTTGTCATGGCTTTCGTAACCGCCATAGCCATCTTGGTACCTTTCCTT
 
. : . : . : . : . : . :
rJMFF002J17- GAGTTTGAAACCCTCGTTGAACGTCCTTGTTGTCGTAGTGACCATAGCCGCCATCCTGGT
JMFF002J17+ GTCGTAGTGACCATAGCCGCCATCCTGGT
                      ____________________________________________________________
consensus GAGTTTGAAACCCTCGTTGAACGTCCTTGTTGTCGTAGTGACCATAGCCGCCATCCTGGT
 
. : . : . : . : . : . :
rJMFF002J17- GCTTCTCCGTCTTGAAGCCCTCGTTGAACTTCTCCTTGGTTTCGTAGTACTTGTCTTTGT
JMFF002J17+ GCTTCTCCGTCTTGAAGCCCTCGTTGAACTTCTCCTTGGTTTCGTAGTACTTGTCTTTGT
                      ____________________________________________________________
consensus GCTTCTCCGTCTTGAAGCCCTCGTTGAACTTCTCCTTGGTTTCGTAGTACTTGTCTTTGT
 
. : . : . : . : . : . :
rJMFF002J17- TATGGTGGTCATAGTGGCCACCATAGCCGTCCTGGTACTTCTCGTACTTCTCCTTGACGC
JMFF002J17+ TATGGTGGTCATAGTGGCCACCATAGCCGTCCTGGTACTTCTCGTACTTCTCCTTGACGC
                      ____________________________________________________________
consensus TATGGTGGTCATAGTGGCCACCATAGCCGTCCTGGTACTTCTCGTACTTCTCCTTGACGC
 
. : . : . : . : . : . :
rJMFF002J17- TGAATTCTTCGTAGAACTTGTCCCTGCCTCCGTGATACTTGTCTTTGTTGTGGAGGTCAA
JMFF002J17+ TGAATTCTTCGTAGAACTTGTCCCTGCCTCCGTGATACTTGTCTTTGTTGTGGAGGTCAA
                      ____________________________________________________________
consensus TGAATTCTTCGTAGAACTTGTCCCTGCCTCCGTGATACTTGTCTTTGTTGTGGAGGTCAA
 
. : . : . : . : . : . :
rJMFF002J17- AGTGG
JMFF002J17+ AGTGGCCGCCAGAGTAGCCACCACCCGGTGCCATGGCGACGTGGCACTGGGACGGCTGAG
                      ____________________________________________________________
consensus AGTGGCCGCCAGAGTAGCCACCACCCGGTGCCATGGCGACGTGGCACTGGGACGGCTGAG
 
. : . : . : . : . : . :
JMFF002J17+ GGGAAGAAAGCATGTAGTTGGTATTATGGCTAGGGTTAGGGTTAGGTTTTGGCCTCATCA
                      ____________________________________________________________
consensus GGGAAGAAAGCATGTAGTTGGTATTATGGCTAGGGTTAGGGTTAGGTTTTGGCCTCATCA
 
. : . : . : . : . : . :
JMFF002J17+ TTTGCATGCTTGAGTAGTTGTAGTTGTTTTGGGAATAGTAATCTTCCTCTTCATGAGAGT
                      ____________________________________________________________
consensus TTTGCATGCTTGAGTAGTTGTAGTTGTTTTGGGAATAGTAATCTTCCTCTTCATGAGAGT
 
. : . : . : . : . : . :
JMFF002J17+ AGTTGTGTTGGTGCTTGTAGCCAACAGCAGGGTAACTCATGTCACTTTGGAGAACCATTT
                      ____________________________________________________________
consensus AGTTGTGTTGGTGCTTGTAGCCAACAGCAGGGTAACTCATGTCACTTTGGAGAACCATTT
 
. : . : . : . : . : . :
JMFF002J17+ TTTTTCTTGGTTTGATGGAAGTGAAAAGATAGATAGATGTTTGGGTTTTGTTGTGTTGGT
                      ____________________________________________________________
consensus TTTTTCTTGGTTTGATGGAAGTGAAAAGATAGATAGATGTTTGGGTTTTGTTGTGTTGGT