| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF002G10 | Sequence | 569 | 007273 (11) | emb|CDP07428.1| | 4e-47 | unnamed protein product [Coffea canephora] | 732 | 007273 (11) | ref|XP_009610156.1| | 1e-101 | PREDICTED: protein BASIC PENTACYSTEINE6-like [Nicotiana tomentosiformis] ref|XP_ |
| JMFF004K17 | Sequence | 444 | 007273 (11) | gb|EYU21873.1| | 1e-32 | hypothetical protein MIMGU_mgv1a0218291mg, partial [Erythranthe guttata] | 786 | 007273 (11) | ref|XP_009610156.1| | 9e-102 | PREDICTED: protein BASIC PENTACYSTEINE6-like [Nicotiana tomentosiformis] ref|XP_ |
| JMFF012A13 | Sequence | 467 | 007273 (11) | gb|EYU21873.1| | 4e-37 | hypothetical protein MIMGU_mgv1a0218291mg, partial [Erythranthe guttata] | 681 | 007273 (11) | ref|XP_009610156.1| | 2e-98 | PREDICTED: protein BASIC PENTACYSTEINE6-like [Nicotiana tomentosiformis] ref|XP_ |
| JMFF026I22 | Sequence | 629 | 007273 (11) | emb|CDP07428.1| | 9e-52 | unnamed protein product [Coffea canephora] | 745 | 007273 (11) | ref|XP_009610156.1| | 1e-101 | PREDICTED: protein BASIC PENTACYSTEINE6-like [Nicotiana tomentosiformis] ref|XP_ |
| JMFF040N22 | Sequence | 518 | 007273 (11) | emb|CDP07428.1| | 9e-47 | unnamed protein product [Coffea canephora] | 716 | 007273 (11) | ref|XP_009610156.1| | 5e-101 | PREDICTED: protein BASIC PENTACYSTEINE6-like [Nicotiana tomentosiformis] ref|XP_ |
| JMFS024F04 | Sequence | 627 | 007273 (11) | emb|CDP07428.1| | 2e-57 | unnamed protein product [Coffea canephora] | |||||
This contig is upended
. : . : . : . : . : . :
rJMFF012A13- CTGAATTGTTATCATCATCCAAAATAGATAGACTTGCTTTACAGTTAT
rJMFF040N22- CTGAATTGTTATCATCATCCAAAATAGATAGACTTGCTTTACAGTTAT
rJMFF004K17- CTGAATTGTTATCATCATCCAAAATAGATAGACTTGCTTTACAGTTAT
____________________________________________________________
consensus CTGAATTGTTATCATCATCCAAAATAGATAGACTTGCTTTACAGTTAT
. : . : . : . : . : . :
rJMFF012A13- CTCTAGTTACTTGCATAGAGGCTCCAAGCCTTAAGACACTTCACTTTGAGCAGTTGAGTC
rJMFF040N22- CTCTAGTTACTTGCATAGAGGCTCCAAGCCTTAAGACACTTCACTTTGAGCAGTTGAGTC
rJMFF004K17- CTCTAGTTACTTGCATAGAGGCTCCAAGCCTTAAGACACTTCACTTTGAGCAGTTGAGTC
____________________________________________________________
consensus CTCTAGTTACTTGCATAGAGGCTCCAAGCCTTAAGACACTTCACTTTGAGCAGTTGAGTC
. : . : . : . : . : . :
rJMFF012A13- ATATCTTAACATATAAAATGCTTGCTAAAGATATTCTCTCATTAATTTTAAGTATTTCAG
rJMFF040N22- ATATCTTAACATATAAAATGCTTGCTAAAGATATTCTCTCATTAATTTTAAGTATTTCAG
rJMFF004K17- ATATCTTAACATATAAAATGCTTGCTAAAGATATTCTCTCATTAATTTTAAGTATTTCAG
____________________________________________________________
consensus ATATCTTAACATATAAAATGCTTGCTAAAGATATTCTCTCATTAATTTTAAGTATTTCAG
. : . : . : . : . : . :
rJMFF012A13- AACATTTATTTGATGGTGATGTAGCGGTTTGTTCCATGCTTTGCCCAGTGCTCCTTCAGG
rJMFF040N22- AACATTTATTTGATGGTGATGTAGCGGTTTGTTCCATGCTTTGCCCAGTGCTCCTTCAGG
rJMFF026I22- TTTATTTGATGGTGATGTAGCGGTTTGTTCCATGCTTTGCCCAGTGCTCCTTCAGG
rJMFF002G10- TTTATTTGATGGTGATGTAGCGGTTTGTTCCATGCTTTGCCCAGTGCTCCTTCAGG
rJMFF004K17- AACATTTATTTGATGGTGATGTAGCGGTTTGTTCCATGCTTTGCCCAGTGCTCCTTCAGG
____________________________________________________________
consensus AACATTTATTTGATGGTGATGTAGCGGTTTGTTCCATGCTTTGCCCAGTGCTCCTTCAGG
. : . : . : . : . : . :
rJMFF012A13- TCAACTGGATTTGATAGATCATGGCCCTCAGCAGCGAGGCGGCTAAGTAGCTTGGTAAAT
rJMFF040N22- TCAACTGGATTTGATAGATCATGGCCCTCAGCAGCGAGGCGGCTAAGTAGCTTGGTAAAT
rJMFF026I22- TCAACTGGATTTGATAGATCATGGCCCTCAGCAGCGAGGCGGCTAAGTAGCTTGGTAAAT
rJMFF002G10- TCAACTGGATTTGATAGATCATGGCCCTCAGCAGCGAGGCGGCTAAGTAGCTTGGTAAAT
rJMFF004K17- TCAACTGGATTTGATAGATCATGGCCCTCAGCAGCGAGGCGGCTAAGTAGCTTGGTAAAT
____________________________________________________________
consensus TCAACTGGATTTGATAGATCATGGCCCTCAGCAGCGAGGCGGCTAAGTAGCTTGGTAAAT
. : . : . : . : . : . :
rJMFF012A13- GCGCTGCCACTCATTTTCCGACCACCAATTCTGGCATGTCGCTTGTTAGGAACTGTTGGA
rJMFF040N22- GCGCTGCCACTCATTTTCCGACCACCAATTCTGGCATGTCGCTTGTTAGGAACTGTTGGA
rJMFF026I22- GCGCTGCCACTCATTTTCCGACCACCAATTCTGGCATGTCGCTTGTTAGGAACTGTTGGA
rJMFF002G10- GCGCTGCCACTCATTTTCCGACCACCAATTCTGGCATGTCGCTTGTTAGGAACTGTTGGA
rJMFF004K17- GCGCTGCCACTCATTTTCCGACCACCAATTCTGGCATGTCGCTTGTTAGGAACTGTTGGA
____________________________________________________________
consensus GCGCTGCCACTCATTTTCCGACCACCAATTCTGGCATGTCGCTTGTTAGGAACTGTTGGA
. : . : . : . : . : . :
rJMFF012A13- AGAGGATACATTGATAAATTGGTTGTGCAGCAAGATGATTGCCAGCCGCCATTTCCCCAT
rJMFF040N22- AGAGGATACATTGATAAATTGGTTGTGCAGCAAGATGATTGCCAGCCGCCATTTCCCCAT
rJMFF026I22- AGAGGATACATTGATAAATTGGTTGTGCAGCAAGATGATTGCCAGCCGCCATTTCCCCAT
rJMFF002G10- AGAGGATACATTGATAAATTGGTTGTGCAGCAAGATGATTGCCAGCCGCCATTTCCCCAT
rJMFF004K17- AGAGGATACATTGATAAATTGGTTGTGCAGCAAGATGATTGCCAGCCGCCATTTCCCCAT
____________________________________________________________
consensus AGAGGATACATTGATAAATTGGTTGTGCAGCAAGATGATTGCCAGCCGCCATTTCCCCAT
. : . : . : . : . : . :
rJMFF012A13- TTGTAGCAAGGCCTTAGAACTCCGGTGCATGAACAAACCGGGACTGGCATAGTTGATTCA
rJMFF040N22- TTGTAGCAAGGCCTTAGAACTCCGGTGCATGAACAAACCGGGACTGGCATAGTTGATTCA
rJMFF026I22- TTGTAGCAAGGCCTTAGAACTCCGGTGCATGAACAAACCGGGACTGGCATAGTTGATTCA
rJMFF002G10- TTGTAGCAAGGCCTTAGAACTCCGGTGCATGAACAAACCGGGACTGGCATAGTTGATTCA
rJMFF004K17- TTGTAGCAAGGCCTTAGAACTCCGGTGCATGAACAAACCGGGACTGGCATAGTTGATTCA
____________________________________________________________
consensus TTGTAGCAAGGCCTTAGAACTCCGGTGCATGAACAAACCGGGACTGGCATAGTTGATTCA
. : . : . : . : . : . :
rJMFF012A13- TCAAACGCCACTTGGTTCAACCCCAGGTCCTGATCCTTCCAATCTGGCTTTGACACACAC
rJMFF040N22- TCAAACGCCACTTGGTTCAACCCCAGGTCCTGATCCTTCCAATCTGGCTTTGACACACAC
rJMFF026I22- TCAAACGCCACTTGGTTCAACCCCAGGTCCTGATCCTTCCAATCTGGCTTTGACACACAC
rJMFF002G10- TCAAACGCCACTTGGTTCAACCCCAGGTCCTGATCCTTCCAATCTGGCTTTGACACACAC
rJMFF004K17- TCAAACGCCACTTGGTTCAACCCCAGGTCCTGATCCTTCCAATCTGGCTTTGACACACAC
____________________________________________________________
consensus TCAAACGCCACTTGGTTCAACCCCAGGTCCTGATCCTTCCAATCTGGCTTTGACACACAC
. : . : . : . : . : . :
rJMFF012A13- ATTTGTCTGCTAAGTTCATCACTTCCACTACCCATTTCTTGTGTGCCCTTCCACTCCTGT
rJMFF040N22- ATTTGTCTGCTAAGTTCATCACTTCCACTACCCATTTCTTGTGTGCCCTTCCACTCCTGT
rJMFF026I22- ATTTGTCTGCTAAGTTCATCACTTCCACTACCCATTTCTTGTGTGCCCTTCCACTCCTGT
rJMFF002G10- ATTTGTCTGCTAAGTTCATCACTTCCACTACCCATTTCTTGTGTGCCCTTCCACTCCTGT
rJMFF004K17- ATTTGTCTGCTAAGTTCATCACTTCCACTACCCATTTCTTGTGTGCCCTTCCACTCCTGT
____________________________________________________________
consensus ATTTGTCTGCTAAGTTCATCACTTCCACTACCCATTTCTTGTGTGCCCTTCCACTCCTGT
. : . : . : . : . : . :
rJMFF012A13- GACTTGCCAAACATCGTCTTGTTCAGGTCTTCGCCTTCTTTCTTAACTTTCTTGGAT-GG
rJMFF040N22- GACTTGCCAAACATCGTCTTGTTCAGGTCTTCGCCTTCTTTCTTAACTTTCTTGGAT-GG
rJMFF026I22- GACTTGCCAAACATCGTCTTGTTCAGGTCTTCGCCTTCTTTCTTAACTTTCTTGGAT-GG
rJMFF002G10- GACTTGCCAAACATCGTCTTGTTCAGGTCTTCGCCTTCTTTCTTAACTTTCTTGGATGGG
rJMFF004K17- GACTTGCCAAACATCGTCTTGTTCAGGTCTTCGCCTTCTTTCTTAACTTTCTTGGATGGG
____________________________________________________________
consensus GACTTGCCAAACATCGTCTTGTTCAGGTCTTCGCCTTCTTTCTTAACTTTCTTGGAT-GG
. : . : . : . : . : . :
rJMFF012A13- TTTCGAAGTC-TTTTTACTAGATGTTGCTGGCTTA
rJMFF040N22- TTTCGAAGTC-TTTTTACTAGATGTTGCTGGCTTAGCTTCTTTAGCTCTTTTGTTCCGCC
rJMFF026I22- TTTCGAAGTC-TTTTTACTAGATGTTGCTGGCTTAGCTTCTTTAGCTCTTTTGTTCCGCC
rJMFF002G10- TTTCGAAGTCTTTTTTACTAGATGTTGCTGGCTTAGCTTCTTTAGCTCTTTTGTTCCG
rJMFF004K17- TTTCGAAGTC-TTTTTACTAGATGTTGCTGGCTTAGCTTCTTTAGCTCTTTTGTTCCGCC
____________________________________________________________
consensus TTTCGAAGTC-TTTTTACTAGATGTTGCTGGCTTAGCTTCTTTAGCTCTTTTGTTCCGCC
. : . : . : . : . : . :
rJMFF040N22- TTGGCTTTGC
rJMFF026I22- TTGGCTTTGC
rJMFF004K17- TTGGCTTTGCAGGCTCGGGAGCAGCTGGTGACATGGGCATCGTATCACTCATGTGCATGT
JMFS024F04+ GTGACATGGGCATCGTATCACTCATGTGCATGT
____________________________________________________________
consensus TTGGCTTTGCAGGCTCGGGAGCAGCTGGTGACATGGGCATCGTATCACTCATGTGCATGT
. : . : . : . : . : . :
rJMFF004K17- CCCTCGAGTTATATACAGC
JMFS024F04+ CCCTCGAGTTATATGCAGCTTCAACCATATGTGGCTGGTGCTGAACATGCTGCTGGGGAT
JMFF026I22+ TTATATGCAGCTTCAACCATATGTGGCTGGTGCTGAACATGCTGCTGGGGAT
____________________________________________________________
consensus CCCTCGAGTTATATGCAGCTTCAACCATATGTGGCTGGTGCTGAACATGCTGCTGGGGAT
. : . : . : . : . : . :
JMFS024F04+ GGTGCATGTGTTTCACTCCCCGCGAAATTTGGCACCCAGGGGGACACGGAGACATACTAC
JMFF040N22+ GCACCCAGGGGGACACGGAGACATACTAC
JMFF026I22+ GGTGCATGTGTTTCACTCCCCGCGAAATTTGGCACCCAGGGGGACACGGAGACATACTAC
JMFF002G10+ GCACCCAGGGGGACACGGAGACATACTAC
____________________________________________________________
consensus GGTGCATGTGTTTCACTCCCCGCGAAATTTGGCACCCAGGGGGACACGGAGACATACTAC
. : . : . : . : . : . :
JMFS024F04+ CAGTATTCATCGAGCTCTCATGATACTGAAGAGTGGCAATAGCGTTGTCTCGTTCCATTA
JMFF012A13+ CATGAGACTGAAGAGTGGCAATAGCGTTGTCTCGTTCCATTA
JMFF004K17+ GCGTTGTCTCGTTCCATTA
JMFF040N22+ CAGTATTCATCGAGCTCTCATGAGACTGAAGAGTGGCAATAGCGTTGTCTCGTTCCATTA
JMFF026I22+ CAGTATTCATCGAGCTCTCATGATACTGAAGAGTGGCAATAGCGTTGTCTCGTTCCATTA
JMFF002G10+ CAGTATTCATCGAGCTCTCATGATACTGAAGAGTGGCAATAGCGTTGTCTCGTTCCATTA
____________________________________________________________
consensus CAGTATTCATCGAGCTCTCATGATACTGAAGAGTGGCAATAGCGTTGTCTCGTTCCATTA
. : . : . : . : . : . :
JMFS024F04+ TCGCATTGTTTCGCTCAGCAATAGCTGTGTCTCGTTGTAGGATAGCAGTGTCCCGCTCAG
JMFF012A13+ TCGCATTGTTTCGCTCAGCAATAGCTGTGTCTCGTTGTAGGATAGCAGTGTCCCGCTCAG
JMFF004K17+ TCGCATTGTTTCGCTCAGCAATAGCTGTGTCTCGTTGTAGGATAGCAGTGTCCCGCTCAG
JMFF040N22+ TCGCATTGTTTCGCTCAGCAATAGCTGTGTCTCGTTGTAGGATAGCAGTGTCCCGCTCAG
JMFF026I22+ TCGCATTGTTTCGCTCAGCAATAGCTGTGTCTCGTTGTAGGATAGCAGTGTCCCGCTCAG
JMFF002G10+ TCGCATTGTTTCGCTCAGCAATAGCTGTGTCTCGTTGTAGGATAGCAGTGTCCCGCTCAG
____________________________________________________________
consensus TCGCATTGTTTCGCTCAGCAATAGCTGTGTCTCGTTGTAGGATAGCAGTGTCCCGCTCAG
. : . : . : . : . : . :
JMFS024F04+ CCAAGGCAGCCTTCTTTTCAGAAAGAGCCAAATTCCTCTCTTGTATCGCAGCATCTCTTT
JMFF012A13+ CCAAGGCAGCCTTCTTTTCAGAAAGAGCCAAATTCCTCTCTTGTATCGCAGCATCTCTTT
JMFF004K17+ CCAAGGCAGCCTTCTTTTCAGAAAGAGCCAAATTCCTCTCTTGTATCGCAGCATCTCTTT
JMFF040N22+ CCAAGGCAGCCTTCTTTTCAGAAAGAGCCAAATTCCTCTCTTGTATCGCAGCATCTCTTT
JMFF026I22+ CCAAGGCAGCCTTCTTTTCAGAAAGAGCCAAATTCCTCTCTTGTATCGCAGCATCTCTTT
JMFF002G10+ CCAAGGCAGCCTTCTTTTCAGAAAGAGCCAAATTCCTCTCTTGTATCGCAGCATCTCTTT
____________________________________________________________
consensus CCAAGGCAGCCTTCTTTTCAGAAAGAGCCAAATTCCTCTCTTGTATCGCAGCATCTCTTT
. : . : . : . : . : . :
JMFS024F04+ CGGCCATGATGCCCATTATCTGCTTCATCGTTGGCTGATGCTGCATCAGCCACTGACCCT
JMFF012A13+ CGGCCATGATGCCCATTATCTGCTTCATCGTTGGCTGATGCTGCATCAGCCACTGACCCT
JMFF004K17+ CGGCCATGATGCCCATTATCTGCTTCATCGTTGGCTGATGCTGCATCAGCCACTGACCCT
JMFF040N22+ CGGCCATGATGCCCATTATCTGCTTCATCGTTGGCTGATGCTGCATCAGCCACTGACCCT
JMFF026I22+ CGGCCATGATGCCCATTATCTGCTTCATCGTTGGCTGATGCTGCATCAGCCACTGACCCT
JMFF002G10+ CGGCCATGATGCCCATTATCTGCTTCATCGTTGGCTGATGCTGCATCAGCCACTGACCCT
____________________________________________________________
consensus CGGCCATGATGCCCATTATCTGCTTCATCGTTGGCTGATGCTGCATCAGCCACTGACCCT
. : . : . : . : . : . :
JMFS024F04+ GTGGCAGCTTATGCCTGCCATTTTCCCGGTGCCCATCATCCATCTAAAACTGACTCCGAC
JMFF012A13+ GTGGCAGCTTATGCCTGCCATTTTCCCGGTGCCCATCATCCATCTAAAACTGACTCCGAC
JMFF004K17+ GTGGCAGCTTATGCCTGCCATTTTCCCGGTGCCCATCATCCATCTAAAACTGACTCCGAC
JMFF040N22+ GTGGCAGCTTATGCCTGCCATTTTCCCGGTGCCCATCATCCATCTAAAACTGACTCCGAC
JMFF026I22+ GTGGCAGCTTATGCCTGCCATTTTCCCGGTGCCCATCATCCATCTAAAACTGACTCCGAC
JMFF002G10+ GTGGCAGCTTATGCCTGCCATTTTCCCGGTGCCCATCATCCATCTAAAACTGACTCCGAC
____________________________________________________________
consensus GTGGCAGCTTATGCCTGCCATTTTCCCGGTGCCCATCATCCATCTAAAACTGACTCCGAC
. : . : . : . : . : . :
JMFS024F04+ TCAATCACCAACGTCACTTCCAGCTTTTAATCAACGATAAGTACAACATATACTCGATCA
JMFF012A13+ TCAATCACCAACGTCACTTCCAGCTTTTAATCAACGATAAGTACAACATATACTCGATCA
JMFF004K17+ TCAATCACCAACGTCACTTCCAGCTTTTAATCANCGATAAGTACAACATATACTCGATCA
JMFF040N22+ TCAATCACCAACGTCACTTCCAGCTTTTAATCAACGATAAGTACAACATATACTCGATCA
JMFF026I22+ TCAATCACCAACGTCACTTCCAGCTTTTAATCAACGATAAGTACAACATATACTCGATCA
JMFF002G10+ TCAATCACCAACGTCACTTCCAGCTTTTAATCAACGATAAGTACAACATATACTCGATCA
____________________________________________________________
consensus TCAATCACCAACGTCACTTCCAGCTTTTAATCAACGATAAGTACAACATATACTCGATCA
. : . : . : . : . : . :
JMFS024F04+ GGAACGTATCACTGTCCAAACTTGGAGCCGAATGCTCCAAGCTCACACAATTCAAAGCTG
JMFF012A13+ GGAACGTATCACTGTCCAAACTTGGAGCCGAATGCTCCAAGCTCACACAATCCAAAGCTG
JMFF004K17+ GGAACGTATCACTGTCCAAACTTGGAGCCGAATGCTCCAAGCTCACACAATCCAAAGCTG
JMFF040N22+ GGAACGTATCACTGTCCAAACTTGGAGCCGAATGCTCCAAGCTCACACAATCCAAAGCTG
JMFF026I22+ GGAACGTATCACTGTCCAAACTTGGAGCCGAATGCTCCAAGCTCACACAATTCAAAGCTG
JMFF002G10+ GGAACGTATCACTGTCCAAACTTGGAGCCGAATGCTCCAAGCTCACACAATTCAAAGCTG
____________________________________________________________
consensus GGAACGTATCACTGTCCAAACTTGGAGCCGAATGCTCCAAGCTCACACAATTCAAAGCTG
. : . : . : . : . : . :
JMFS024F04+ CATCACGGCAGAC
JMFF012A13+ CATCACGGCAGAC
JMFF004K17+ CATCACGGCAGAC
JMFF040N22+ CATCACGGCAGAC
JMFF026I22+ CATCACGGCAGACACACGAGAATTGAAAGATACATACAGAGGTGAGAAATCAAAGTCAAA
JMFF002G10+ CATCACGGCAGACACACGAGAATTGAAAGATACATACAGAGGTGAGAAATCAAAGTCAAA
____________________________________________________________
consensus CATCACGGCAGACACACGAGAATTGAAAGATACATACAGAGGTGAGAAATCAAAGTCAAA
. : . : . : . : . : . :
JMFF026I22+ ACCCTAAATCAGAGGATAGAAATATCTAATCCAATCT
JMFF002G10+ ACCCTAAATCAGAGGATAGAAATATCTAATCCAATCTAATAAGACGAAAGGAAGAACAGT
____________________________________________________________
consensus ACCCTAAATCAGAGGATAGAAATATCTAATCCAATCTAATAAGACGAAAGGAAGAACAGT