| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF001H22 | Sequence | 534 | 007271 (9) | ref|XP_004953107.1| | 2e-06 | PREDICTED: uncharacterized protein At4g06744-like [Setaria italica] | 783 | 003929 (9) | ref|XP_006360245.1| | 8e-17 | PREDICTED: uncharacterized protein At4g06744-like, partial [Solanum tuberosum] |
| JMSF008N24 | Sequence | 350 | 007271 (9) | 730 | 003929 (9) | ref|XP_006360245.1| | 4e-25 | PREDICTED: uncharacterized protein At4g06744-like, partial [Solanum tuberosum] | |||
| JMSF017F04 | Sequence | 243 | 007271 (9) | 709 | 003929 (9) | ref|XP_006360245.1| | 2e-38 | PREDICTED: uncharacterized protein At4g06744-like, partial [Solanum tuberosum] | |||
| JMSF017N19 | Sequence | 520 | 007271 (9) | ref|XP_009588943.1| | 4e-10 | PREDICTED: uncharacterized protein At4g06744-like [Nicotiana tomentosiformis] | 715 | 003929 (9) | ref|XP_006360245.1| | 1e-54 | PREDICTED: uncharacterized protein At4g06744-like, partial [Solanum tuberosum] |
| JMSF036O16 | Sequence | 677 | 007271 (9) | ref|XP_009588943.1| | 6e-34 | PREDICTED: uncharacterized protein At4g06744-like [Nicotiana tomentosiformis] | 709 | 003929 (9) | ref|XP_006360245.1| | 4e-51 | PREDICTED: uncharacterized protein At4g06744-like, partial [Solanum tuberosum] |
| JMSF037C16 | Sequence | 673 | 007271 (9) | ref|XP_009588943.1| | 5e-34 | PREDICTED: uncharacterized protein At4g06744-like [Nicotiana tomentosiformis] | 695 | 003929 (9) | ref|XP_006360245.1| | 6e-52 | PREDICTED: uncharacterized protein At4g06744-like, partial [Solanum tuberosum] |
| JMSF042F11 | Sequence | 780 | 007271 (9) | ref|XP_009588943.1| | 2e-38 | PREDICTED: uncharacterized protein At4g06744-like [Nicotiana tomentosiformis] | 753 | 003929 (9) | ref|XP_006360245.1| | 8e-57 | PREDICTED: uncharacterized protein At4g06744-like, partial [Solanum tuberosum] |
| JMSF044I16 | Sequence | 746 | 007271 (9) | ref|XP_009588943.1| | 6e-36 | PREDICTED: uncharacterized protein At4g06744-like [Nicotiana tomentosiformis] | 698 | 003929 (9) | ref|XP_006360245.1| | 6e-52 | PREDICTED: uncharacterized protein At4g06744-like, partial [Solanum tuberosum] |
| JMSF046P03 | Sequence | 720 | 007271 (9) | ref|XP_009588943.1| | 7e-43 | PREDICTED: uncharacterized protein At4g06744-like [Nicotiana tomentosiformis] | 681 | 003929 (9) | ref|XP_006360245.1| | 1e-52 | PREDICTED: uncharacterized protein At4g06744-like, partial [Solanum tuberosum] |
This contig is upended
. : . : . : . : . : . :
JMSF042F11+ AGGTGAGGAAGAAAACCGGCGTGGATCCGAGG
____________________________________________________________
consensus AGGTGAGGAAGAAAACCGGCGTGGATCCGAGG
. : . : . : . : . : . :
JMSF042F11+ TTGTCGGGGAGCGGGCCGGAGAAGAAATTGTTGTTGAGGAACAGAGCGTCGAGGTCTAAC
JMSF044I16+ CGGGGAGCGGGCCGGAGAAGAAATTGTTGTTGAGGAACAGAGCGTCGAGGTCTAAC
JMSF046P03+ TTGTTGAGGAACAGAGCGTCGAGGTCTAAC
____________________________________________________________
consensus TTGTCGGGGAGCGGGCCGGAGAAGAAATTGTTGTTGAGGAACAGAGCGTCGAGGTCTAAC
. : . : . : . : . : . :
JMSF042F11+ GTGAAAACCTGCGGGTGGACCGGGCCGGTCAGCATGTTGAACCGGAGATCCAAATACGTT
JMSF044I16+ GTGAAAACCTGCGGGTGGACCGGGCCGGTCAGCATGTTGAACCGGAGATCCAAATACGTT
JMSF036O16+ GGTGGACCGGGCCGGTCAGCATGTTGAACCGGAGATCCAAATACGTT
JMSF046P03+ GTGAAAACCTGCGGGTGGACCGGGCCGGTCAGCATGTTGAACCGGAGATCCAAATACGTT
JMSF037C16+ GACCGGGCCGGTCAGCATGTTGAACCGGAGATCCAAATACGTT
____________________________________________________________
consensus GTGAAAACCTGCGGGTGGACCGGGCCGGTCAGCATGTTGAACCGGAGATCCAAATACGTT
. : . : . : . : . : . :
JMSF042F11+ AAGTTGGTGGCTTCAAGGACGGCGGTGGGGAACGCGCCGGCGAGCTTGTTGTTGCTGAGG
JMSF044I16+ AAGTTGGTGGCTTCAAGGACGGCGGTGGGGAACGCGCCGGCGAGCTTGTTGTTGCTGAGG
JMSF036O16+ AAGTTGGTGGCTTCAAGGACGGCGGTGGGGAACGCGCCGGCGAGCTTGTTGTTGCTGAGG
JMSF046P03+ AAGTTGGTGGCTTCAAGGACGGCGGTGGGGAACGCGCCGGCGAGCTTGTTGTTGCTGAGG
JMSF037C16+ AAGTTGGTGGCTTCAAGGACGGCGGTGGGGAACGCGCCGGCGAGCTTGTTGTTGCTGAGG
____________________________________________________________
consensus AAGTTGGTGGCTTCAAGGACGGCGGTGGGGAACGCGCCGGCGAGCTTGTTGTTGCTGAGG
. : . : . : . : . : . :
JMSF042F11+ TCAAGCTCGAAGAGCGTGGGGAATTTCTGGACGGGGATTCCCGGAGCTCCGGTGAAGTTA
JMSF044I16+ TCAAGCTCGAAGAGCGTGGGGAATTTCTGGACGGGGATTCCCGGAGCTCCGGTGAAGTTA
JMSF036O16+ TCAAGCTCGAAGAGCGTGGGGAATTTCTGGACGGGGATTCCCGGAGCTCCGGTGAAGTTA
JMSF046P03+ TCAAGCTCGAAGAGCGTGGGGAATTTCTGGACGGGGATTCCCGGAGCTCCGGTGAAGTTA
JMSF017N19+ GGTGAAGTTA
JMSF037C16+ TCAAGCTCGAAGAGCGTGGGGAATTTCTGGACGGGGATTCCCGGAGCTCCGGTGAAGTTA
____________________________________________________________
consensus TCAAGCTCGAAGAGCGTGGGGAATTTCTGGACGGGGATTCCCGGAGCTCCGGTGAAGTTA
. : . : . : . : . : . :
JMSF042F11+ TTGGAATTCACGTGGATGACGACCAAGTCGTTGAAGGATTCCACGAAGCTGTTAAGCGAC
JMSF044I16+ TTGGAATTCACGTGGATGACGACCAAGTCGTTGAAGGATTCCACGAAGCTGTTAAGCGAC
JMSF036O16+ TTGGAATTCACGTGGATGACGACCAAGTCGTTGAAGGATTCCACGAAGCTGTTAAGCGAC
JMSF046P03+ TTGGAATTCACGTGGATGACGACCAAGTCGTTGAAGGATTCCACGAAGCTGTTAAGCGAC
JMSF017N19+ TTGGAATTCACGTGGATGACGACCAAGTCGTTGAAGGATTCCACGAAGCTGTTAAGCGAC
JMSF037C16+ TTGGAATTCACGTGGATGACGACCAAGTCGTTGAAGGATTCCACGAAGCTGTTAAGCGAC
JMFF001H22+ TTCACGTGGATGACGACCAAGTCGTTGAAGGATTCCACGAAGCTGTTAAGCGAC
____________________________________________________________
consensus TTGGAATTCACGTGGATGACGACCAAGTCGTTGAAGGATTCCACGAAGCTGTTAAGCGAC
. : . : . : . : . : . :
JMSF042F11+ AGGCCGTTACCGTTGAAGTTGTAGCCGTTGAAGTAAATCCCACCGACCCTTTTCTTGTCG
JMSF044I16+ AGGCCGTTACCGTTGAAGTTGTAGCCGTTGAAGTAAATCCCACCGACCCTTTTCTTGTCG
JMSF036O16+ AGGCCGTTACCGTTGAAGTTGTAGCCGTTGAAGTAAATCCCACCGACCCTTTTCTTGTCG
JMSF046P03+ AGGCCGTTACCGTTGAAGTNGTAGCCGTTGAAGTAAATCCCACCGACCCTTTTCTTGTCG
JMSF017N19+ AGGCCGTTACCGTTGAAGTTGTAGCCGTTGAAGTAAATCCCACCGACCCTTTTCTTGTCG
JMSF037C16+ AGGCCGTTACCGTTGAAGTTGTAGCCGTTGAAGTAAATCCCACCGACCCTTTTCTTGTCG
JMFF001H22+ AGGCCGTTACCGTTGAAGTTGTAGCCGTTGAAGTAAATCCCACCGACCCTTTTCTTGTCG
____________________________________________________________
consensus AGGCCGTTACCGTTGAAGTTGTAGCCGTTGAAGTAAATCCCACCGACCCTTTTCTTGTCG
. : . : . : . : . : . :
JMSF042F11+ CCGCCTCTGGGCACGTAGCAGAAGAACCCTTGGTACTTCTTCTTATTTATGCACAGCTCA
JMSF044I16+ CCGCCTCTGGGCACGTAGCAGAAGAACCCTTGGTACTTCTTCTTATTTATGCACAGCTCA
JMSF036O16+ CCGCCTCTGGGCACGTAGCAGAAGAACCCTTGGTACTTCTTCTTATTTATGCACAGCTCA
JMSF046P03+ CCGCCTCTGGGCACGTAGCAGAAGAACCCTTGGTACTTCTTCTTATTTATGCACAGCTCA
JMSF017N19+ CCGCCTCTGGGCACGTAGCAGAAGAACCCTTGGTACTTCTTCTTATTTATGCACAGCTCA
JMSF008N24+ TCTTATTTATGCACAGCTCA
JMSF037C16+ CCGCCTCTGGGCACGTAGCAGAAGAACCCTTGGTACTTCTTCTTATTTATGCACAGCTCA
JMFF001H22+ CCGCCTCTGGGCACGTAGCAGAAGAACCCTTGGTACTTCTTCTTATTTATGCACAGCTCA
____________________________________________________________
consensus CCGCCTCTGGGCACGTAGCAGAAGAACCCTTGGTACTTCTTCTTATTTATGCACAGCTCA
. : . : . : . : . : . :
JMSF042F11+ TTGCCTTCCCAGCTTTGGGTGATGTTTTGTGGGTCATATGTTATCGATTTCTTGAAAGTC
JMSF044I16+ TTGCCTTCCCAGCTTTGGGTGACGTTTTGTGGGTCATATGTTATCGATTTCTTGAAAGTC
JMSF036O16+ TTGCCTTCCCAGCTTTGGGTGATGTTTTGTGGGTCATATGTTATCGATTTCTTGAAAGTC
JMSF046P03+ TTGCCTTCCCAGCTTTGGGTGATGTTTTGTGGGTCATATGTTATCGATTTCTTGAAAGTC
JMSF017N19+ TTGCCTTCCCAGCTTTGGGTGATGTTTTGTGGGTCATATGTTATCGATTTCTTGAAAGTC
JMSF008N24+ TTGCCTTCCCAGCTTTGGGTGATGTTTTGTGGGTCATATGTTATCGATTTCTTGAAAGTC
JMSF037C16+ TTGCCTTCCCAGCTTTGGGTGATGTTTTGTGGGTCATATGTTATCGATTTCTTGAAAGTC
JMFF001H22+ TTGCCTTCCCAGCTTTGGGTGATGTTTTGTGGGTCATATGTTATCGATTTCTTGAAAGTC
____________________________________________________________
consensus TTGCCTTCCCAGCTTTGGGTGATGTTTTGTGGGTCATATGTTATCGATTTCTTGAAAGTC
. : . : . : . : . : . :
JMSF042F11+ CTTATGGCTTTAATCGACTTCCGTATCACCGGATCCAGCGGCGGCGGGCATGGGGGCGGC
JMSF044I16+ CTTATGGCTTTAATCGACTTCCGTATCACCGGATCCAGCGGCGGCGGGCATGGGGGCGGC
JMSF036O16+ CTTATGGCTTTAATCGACTTCCGTATCACCGGATCCAGCGGCGGCGGGCATGGGGGCGGC
JMSF046P03+ CTTATGGCTTTAATCGACTTCCGTATCACCGGATCCAGCGGCGGCGGGCATGGGGGCGGC
JMSF017N19+ CTTATGGCTTTAATCGACTTCCGTATCACCGGATCCAGCGGCGGCGGGCATGGGGGCGGC
JMSF008N24+ CTTATGGCTTTAATCGACTTCCGTATCACCGGATCCAGCGGCGGCGGGCATGGGGGCGGC
JMSF017F04+ ACCGGATCCAGCGGCGGCGGGCATGGGGGCGGC
JMSF037C16+ CTTATGGCTTTAATCGACTTCCGTATCACCGGATCCAGCGGCGGCGGGCATGGGGGCGGC
JMFF001H22+ CTTATGGCTTTAATCGACTTCCGTATCACCGGATCCAGCGGCGGCGGGCATGGGGGCGGC
____________________________________________________________
consensus CTTATGGCTTTAATCGACTTCCGTATCACCGGATCCAGCGGCGGCGGGCATGGGGGCGGC
. : . : . : . : . : . :
JMSF042F11+ GGGGGTGGAGGTACATAACAACCACAGTCGACATTATAAACAAGGGAGACAGGAGGGGAG
JMSF044I16+ GGGGGTGGAGGTACATAACAACCACAGTCGACATTATAAACAAGGGAGGCAGGAGGGGAG
JMSF036O16+ GGGGGTGGAGGTACATAACAACCACAGTCGACATTATAAACAAGGGAGGCAGGAGGGGAG
JMSF046P03+ GGGGGTGGAGGTACATAACAACCACAGTCGACATTATAAACAAGGGAGGCAGGAGGGGAG
JMSF017N19+ GGGGGTGGAGGTACATAACAACCACAGTCGACATTATAAACAAGGGAGGCAGGAGGGGAG
JMSF008N24+ GGGGGTGGAGGTACATAACAACCACAGTCGACATTATAAACAAGGGAGGCAGGAGGGGAG
JMSF017F04+ GGGGGTGGAGGTACATAACAACCACAGTCGACATTATAAACAAGGGAGGCAGGAGGGGAG
JMSF037C16+ GGGGGTGGAGGTACATAACAACCACAGTCGACATTATAAACAAGGGAGGCAGGAGGGGAG
JMFF001H22+ GGGGGTGGAGGTACATAACAACCACAGTCGACATTATAAACAAGGGAGGCAGGAGGGGAG
____________________________________________________________
consensus GGGGGTGGAGGTACATAACAACCACAGTCGACATTATAAACAAGGGAGGCAGGAGGGGAG
. : . : . : . : . : . :
JMSF042F11+ GTTTCTTTACTTTCTTCTTCCCCAGGCATGATTTCTGATGGAATGGCAGTGGGGAGAAGA
JMSF044I16+ GTTTCTTTACTTTCTTCTTCCCCAGGCATGATTTCTGATGGAATGGCAGTGGGGAGAAGA
JMSF036O16+ GTTTCTTTACTTTCTTCTTCCCCAGGCATGATTTCTGATGGAATGGCAGTGGGGAGAAGA
JMSF046P03+ GTTTCTTTACTTTCTTCTTCCCCAGGCATGATTTCTGATGGAATGGCAGTGGGGAGAAGA
JMSF017N19+ GTTTCTTTACTTTCTTCTTCCCCAGGCATGATTTCTGATGGAATGGCAGTGGGGAGAAGA
JMSF008N24+ GTTTCTTTACTTTCTTCTTCCCCAGGCATGATTTCTGATGGAATGGCAGTGGGGAGAAGA
JMSF017F04+ GTTTCTTTACTTTCTTCTTCCCCAGGCATGATTTCTGATGGAATGGCAGTGGGGAGAAGA
JMSF037C16+ GTTTCTTTACTTTCTTCTTCCCCAGGCATGATTTCTGATGGAATGGCAGTGGGGAGAAGA
JMFF001H22+ GTTTCTTTACTTTCTTCTTCCCCAGGCATGATTTCTGATGGAATGGCAGTGGGGAGAAGA
____________________________________________________________
consensus GTTTCTTTACTTTCTTCTTCCCCAGGCATGATTTCTGATGGAATGGCAGTGGGGAGAAGA
. : . : . : . : . : . :
JMSF042F11+ GAGAAGAAGACAAGGAGACATTTTGCTGCTCCAAATGGGGTGAAACTGAAACTGGGTGCC
JMSF044I16+ GAGAAGAAGACAAGGAGACATTTTGCTGCTCCAAATGGGGTGAAACTGAAACTGGGTGCC
JMSF036O16+ GAGAAGAAGACAAGGAGACATTTTGCTGCTCCAAATGGGGTGAAACTGAAACTGGGTGCC
JMSF046P03+ GAGAAGAAGACAAGGAGACATTTTGCTGCTCCAAATGGGGTGAAACTGAAACTGGGTGCC
JMSF017N19+ GAGAAGAAGACAAGGAGACATTTTGCTGCTCCAAATGGGGTGAAACTGAAACTGGGTGCC
JMSF008N24+ GAGAAGAAGACAAGGAGACATTTTGCTGCTCCAAATGGGGTGAAACTGAAACTGGGTGCC
JMSF017F04+ GAGAAGAAGACAAGGAGACATTTTGCTGCTCCAAATGGGGTGAAACTGAAACTGGGTGCC
JMSF037C16+ GAGAAGAAGACAAGGAGACATTTTGCTGCTCCAAATGGGGTGAAACTGAAACTGGGTGCC
JMFF001H22+ GAGAAGAAGACAAGGAGACATTTTGCTGCTCCAAATGGGGTGAAACTGAAACTGGGTGCC
____________________________________________________________
consensus GAGAAGAAGACAAGGAGACATTTTGCTGCTCCAAATGGGGTGAAACTGAAACTGGGTGCC
. : . : . : . : . : . :
JMSF042F11+ ATTCTCATTATGAGTGGGATTTTTTT
JMSF044I16+ ATTCTCATTATGAGTGGGATTTTTTTTG
JMSF036O16+ ATTCTCATTATGAGTGGGATTTTTTTTGCC
JMSF046P03+ ATTCTCATTATGAGTGGGATTTTTTTTGCC
JMSF017N19+ ATTCTCATTATGAGTGGGATTTTTTTTGCC
JMSF008N24+ ATTCTCATTATGAGTGGGATTTTTTTTGCC
JMSF017F04+ ATTCTCATTATGAGTGGGATTTTTTTTG
JMSF037C16+ ATTCTCATTATGAGTGGGATTTTTTTTGCC
JMFF001H22+ ATTCTCATTATGAGTGGGATTTTTTTTGCAGGAATGGAGATGGAGGTAGCCCATACATGT
____________________________________________________________
consensus ATTCTCATTATGAGTGGGATTTTTTTTGCCGGAATGGAGATGGAGGTAGCCCATACATGT