| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF001E05 | Sequence | 560 | 007269 (7) | ref|XP_009625296.1| | 7e-18 | PREDICTED: scarecrow-like protein 13 [Nicotiana tomentosiformis] | 714 | 011212 (3) | ref|XP_010312439.1| | 1e-106 | PREDICTED: GRAS1 protein isoform X1 [Solanum lycopersicum] |
| JMFF031N14 | Sequence | 590 | 007269 (7) | ref|XP_009625296.1| | 1e-24 | PREDICTED: scarecrow-like protein 13 [Nicotiana tomentosiformis] | 696 | 011212 (3) | ref|XP_010312439.1| | 4e-96 | PREDICTED: GRAS1 protein isoform X1 [Solanum lycopersicum] |
| JMFF049I02 | Sequence | 617 | 007269 (7) | ref|XP_009625296.1| | 9e-28 | PREDICTED: scarecrow-like protein 13 [Nicotiana tomentosiformis] | 713 | 011212 (3) | ref|XP_006365847.1| | 5e-37 | PREDICTED: scarecrow-like protein 13-like isoform X1 [Solanum tuberosum] ref|XP |
| JMFS061D01 | Sequence | 642 | 007269 (7) | ref|XP_009625296.1| | 1e-36 | PREDICTED: scarecrow-like protein 13 [Nicotiana tomentosiformis] | |||||
| JMFS119B03 | Sequence | 626 | 007269 (7) | ref|XP_009625296.1| | 2e-31 | PREDICTED: scarecrow-like protein 13 [Nicotiana tomentosiformis] | |||||
| JMFS160D11 | Sequence | 554 | 007269 (7) | ref|XP_009625296.1| | 3e-20 | PREDICTED: scarecrow-like protein 13 [Nicotiana tomentosiformis] | |||||
| JMFS167D09 | Sequence | 627 | 007269 (7) | ref|XP_009625296.1| | 4e-40 | PREDICTED: scarecrow-like protein 13 [Nicotiana tomentosiformis] | |||||
This contig is upended
. : . : . : . : . : . :
JMFS167D09+ CGCATCACTAAACGAGCAACTATAGTANTCGTCAA
____________________________________________________________
consensus CGCATCACTAAACGAGCAACTATAGTANTCGTCAA
. : . : . : . : . : . :
JMFS167D09+ TTTCAGATTCGGGACCGAGCAATTTATTCTCCAATTCTCGCAACACATGCCTCAGTTCAT
JMFS119B03+ TTATTCTCCAATTCTCGCAACACATGCCTCAGTTCAT
JMFS061D01+ TTATTCTCCAATTCTCGCAACACATGCCTCAGTTCAT
JMFF049I02+ GCAACACATGCCTCAGTTCAT
____________________________________________________________
consensus TTTCAGATTCGGGACCGAGCAATTTATTCTCCAATTCTCGCAACACATGCCTCAGTTCAT
. : . : . : . : . : . :
JMFS167D09+ TCCCATCAACAACGCCAGAACACCCGCTTAAAGGCGAACCACAAGTAGTATTATCCGACA
JMFS119B03+ TCCCATCAACAACGCCAGAACACCCGCTTAAAGGCGAACCACAAGTAGTATTATCCGACA
JMFS061D01+ TCCCATCAACAACGCCAGAACACCCGCTTAAAGGCGAACCACAAGTAGTATTATCCGACA
JMFF049I02+ TCCCATCAACAACGCCAGAACACCCGCTTAAAGGCGAACCACAAGTAGTATTATCCGACA
JMFS160D11+ TAAAGGCGAACCACAAGTAGTATTATCCGACA
JMFF031N14+ CAACAACGCCAGAACACCCGCTTAAAGGCGAACCACAAGTAGTATTATCCGACA
JMFF001E05+ ACAAGTAGTATTATCCGACA
____________________________________________________________
consensus TCCCATCAACAACGCCAGAACACCCGCTTAAAGGCGAACCACAAGTAGTATTATCCGACA
. : . : . : . : . : . :
JMFS167D09+ TATACGACTGAGAGCATTGGGGAGAAAACGCGCTCCGATTGGAAGAAACACTGGCAGCAG
JMFS119B03+ TATACGACTGAGAGCATTGGGGAGAAAACGCGCTCCGATTGGAAGAAACACTGGCAGCAG
JMFS061D01+ TATACGACTGAGAGCATTGGGGAGAAAACGCGCTCCGATTGGAAGAAACACTGGCAGCAG
JMFF049I02+ TATACGACTGAGAGCATTGGGGAGAAAACGCGCTCCGATTGGAAGAAACACTGGCAGCAG
JMFS160D11+ TATACGACTGAGAGCATTGGGGAGAAAACGCGCTCCGATTGGAAGAAACACTGGCAGCAG
JMFF031N14+ TATACGACTGAGAGCATTGGGGAGAAAACGCGCTCCGATTGGAAGAAACACTGGCAGCAG
JMFF001E05+ TATACGACTGAGAGCATTGGGGAGAAAACGCGCTCCGATTGGAAGAAACACTGGCAGCAG
____________________________________________________________
consensus TATACGACTGAGAGCATTGGGGAGAAAACGCGCTCCGATTGGAAGAAACACTGGCAGCAG
. : . : . : . : . : . :
JMFS167D09+ GGGGCGAATCATAATACACGGAATCAATTCCAGCAGGCGCTGAATCCAAAGTGAAGAACT
JMFS119B03+ GGGGCGAATCATAATACACGGAATCAATTCCAGCAGGCGCTGAATCCAAAGTGAAGAACT
JMFS061D01+ GGGGCGAATCATAATACACGGAATCAATTCCAGCAGGCGCTGAATCCAAAGTGAAGAACT
JMFF049I02+ GGGGCGAATCATAATACACGGAATCAATTCCAGCAGGCGCTGAATCCAAAGTGAAGAACT
JMFS160D11+ GGGGCGAATCATAATACACGGAATCAATTCCAGCAGGCGCTGAATCCAAAGTGAAGAACT
JMFF031N14+ GGGGCGAATCATAATACACGGAATCAATTCCAGCAGGCGCTGAATCCAAAGTGAAGAACT
JMFF001E05+ GGGGCGAATCATAATACACGGAATCAATTCCAGCAGGCGCTGAATCCAAAGTGAAGAACT
____________________________________________________________
consensus GGGGCGAATCATAATACACGGAATCAATTCCAGCAGGCGCTGAATCCAAAGTGAAGAACT
. : . : . : . : . : . :
JMFS167D09+ GCTCGTTTTGGGCCTGGAAAAAGCCTTGTTCCCCTACACTACCACTCTCATTCGAAACAT
JMFS119B03+ GCTCGTTTTGGGCCTGGAAAAAGCCTTGTTCCCCTACACTACCACTCTCATTCGAAACAT
JMFS061D01+ GCTCGTTTTGGGCCTGGAAAAAGCCTTGTTCCCCTACACTACCACTCTCATTCGAAACAT
JMFF049I02+ GCTCGTTTTGGGCCTGGAAAAAGCCTTGTTCCCCTACACTACCACTCTCATTCGAAACAT
JMFS160D11+ GCTCGTTTTGGGCCTGGAAAAAGCCTTGTTCCCCTACACTACCACTCTCATTCGAAACAT
JMFF031N14+ GCTCGTTTTGGGCCTGGAAAAAGCCTTGTTCCCCTACACTACCACTCTCATTCGAAACAT
JMFF001E05+ GCTCGTTTTGGGCCTGGAAAAAGCCTTGTTCCCCTACACTACCACTCTCATTCGAAACAT
____________________________________________________________
consensus GCTCGTTTTGGGCCTGGAAAAAGCCTTGTTCCCCTACACTACCACTCTCATTCGAAACAT
. : . : . : . : . : . :
JMFS167D09+ CGTTGTTCAAAACATGGAAAGCGGCATAATACTGCTGAGGCTGATGGTAAAACCTCTGTA
JMFS119B03+ CGTTGTTCAAAACATGGAAAGCGGCATAATACTGCTGAGGCTGATGGTAAAACCTCTGTA
JMFS061D01+ CGTTGTTCAAAACATGGAAAGCGGCATAATACTGCTGAGGCTGATGGTAAAACCTCTGTA
JMFF049I02+ CGTTGTTCAAAACATGGAAAGCGGCATAATACTGCTGAGGCTGATGGTAAAACCTCTGTA
JMFS160D11+ CGTTGTTCAAAACATGGAAAGCGGCATAATACTGCTGAGGCTGATGGTAAAACCTCTGTA
JMFF031N14+ CGTTGTTCAAAACATGGAAAGCGGCATAATACTGCTGAGGCTGATGGTAAAACCTCTGTA
JMFF001E05+ CGTTGTTCAAAACATGGAAAGCGGCATAATACTGCTGAGGCTGATGGTAAAACCTCTGTA
____________________________________________________________
consensus CGTTGTTCAAAACATGGAAAGCGGCATAATACTGCTGAGGCTGATGGTAAAACCTCTGTA
. : . : . : . : . : . :
JMFS167D09+ CACTGCTAGACGACGATTGAGGTCCCTGGGAGGCCTGCATTTGTAGTTGCGGAATAACCC
JMFS119B03+ CACTGCTAGACGACGATTGAGGTCCCTGGGAGGCCTGCATTTGTAGTTGCGGAATAACCC
JMFS061D01+ CACTGCTAGACGACGATTGAGGTCCCTGGGAGGCCTGCATTTGTAGTTGCGGAATAACCC
JMFF049I02+ CACTGCTAGACGACGATTGAGGTCCCTGGGAGGCCTGCATTTGTAGTTGCGGAATAACCC
JMFS160D11+ CACTGCTAGACGACGATTGAGGTCCCTGGGAGGCCTGCATTTGTAGTTGCGGAATAACCC
JMFF031N14+ CACTGCTAGACGACGATTGAGGTCCCTGGGAGGCCTGCATTTGTAGTTGCGGAATAACCC
JMFF001E05+ CACTGCTAGACGACGATTGAGGTCCCTGGGAGGCCTGCATTTGTAGTTGCGGAATAACCC
____________________________________________________________
consensus CACTGCTAGACGACGATTGAGGTCCCTGGGAGGCCTGCATTTGTAGTTGCGGAATAACCC
. : . : . : . : . : . :
JMFS167D09+ TTCTTCACTCGCTCAAAAATGGGTGAATACTACTTCACTTCAGGTACGTTTCTTCGATCG
JMFS119B03+ TTCTTCACTCGCTCAAAAATGGGTGAATACTACTTCACTTCAGGTACGTTTCTTCGATCG
JMFS061D01+ TTCTTCACTCGCTCAAAAATGGGTGAATACTACTTCACTTCAGGTACGTTTCTTCGATCG
JMFF049I02+ TTCTTCACTCGCTCAAAAATGGGTGAATACTACTTCACTTCAGGTACGTTTCTTCGATCG
JMFS160D11+ TTCTTCACTCGCTCAAAAATGGGTGAATACTACTTCACTTCAGGTACGTTTCTTCGATCG
JMFF031N14+ TTCTTCACTCGCTCAAAAATGGGTGAATACTACTTCACTTCAGGTACGTTTCTTCGATCG
JMFF001E05+ TTCTTCACTCGCTCAAAAATGGGTGAATACTACTTCACTTCAGGTACGTTTCTTCGATCG
____________________________________________________________
consensus TTCTTCACTCGCTCAAAAATGGGTGAATACTACTTCACTTCAGGTACGTTTCTTCGATCG
. : . : . : . : . : . :
JMFS167D09+ AAACGAGTCCATTGATCACAAAAGGGAGTGTAACCAACAAAATCTGAACAAGTACTTCTC
JMFS119B03+ AAACGAGTCCATTGATCACAAAAGGGAGTGTAACCAACAAAATCTGAACAAGTACTTCTC
JMFS061D01+ AAACGAGTCCATTGATCACAAAAGGGAGTGTAACCAACAAAATCTGAACAAGTACTTCTC
JMFF049I02+ AAACGAGTCCATTGATCACAAAAGGGAGTGTAACCAACAAAATCTGAACAAGTACTTCTC
JMFS160D11+ AAACGAGTCCATTGATCACAAAAGGGAGTGTAACCAACAAAATCTGAACAAGTACTTCTC
JMFF031N14+ AAACGAGTCCATTGATCACAAAAGGGAGTGTAACCAACAAAATCTGAACAAGTACTTCTC
JMFF001E05+ AAACGAGTCCATTGATCACAAAAGGGAGTGTAACCAACAAAATCTGAACAAGTACTTCTC
____________________________________________________________
consensus AAACGAGTCCATTGATCACAAAAGGGAGTGTAACCAACAAAATCTGAACAAGTACTTCTC
. : . : . : . : . : . :
JMFS167D09+ TGATGAATTTAAGTTTTCAGGATTTTTCTTTTCCTTCCGAGGGGAGAGACGA
JMFS119B03+ TGATGAATTTAAGTTTTCAGGATTTTTCTTTTCCTTCCGAGGGGAGAGACGATTGGTGGT
JMFS061D01+ TGATGAATTTAAGTTTTCAGGATTTTTCTTTTCCTTCCGAGGGGAGAGACGATTGGTGGT
JMFF049I02+ TGATGAATTTAAGTTTTCAGGATTTTTCTTTTCCTTCCGAGGGGAGAGACGATTGGTGGT
JMFS160D11+ TGATGAATTTAAGTTTTCAGGATTTTTCTTTTCCTTCCGAGGGGAGAGACGATTGGTGGT
JMFF031N14+ TGATGAATTTAAGTTTTCAGGATTTTTCTTTTCCTTCCGAGGGGAGAGACGATTGGTGGT
JMFF001E05+ TGATGAATTTAAGTTTTCAGGATTTTTCTTTTCCTTCCGAGGGGAGAGACGATTGGTGGT
____________________________________________________________
consensus TGATGAATTTAAGTTTTCAGGATTTTTCTTTTCCTTCCGAGGGGAGAGACGATTGGTGGT
. : . : . : . : . : . :
JMFS119B03+ CCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTG
JMFS061D01+ CCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTGTCTTCTGCAACAAG
JMFF049I02+ CCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTGTCTTCTGCAACAAGCCGATTGCTT
JMFS160D11+ CCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTGTCTTCTGCAA
JMFF031N14+ CCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTGTCTTCTGCAACAAGCCGATTGCTT
JMFF001E05+ CCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTGTCTTCTGCAACAAGCCGATTGCTTAAAC
____________________________________________________________
consensus CCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTGTCTTCTGCAACAAGCCGATTGCTTAAAC