Contig 007265:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF019D22+                                           GACATCACAAGGTATGTGCTGAAAAAT
                      ____________________________________________________________
consensus                                              GACATCACAAGGTATGTGCTGAAAAAT
 
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rJMSF019D22+          AACACATCTGGAGAAACTATCATAAAACACTTGAATAAGGATCAAGAGGCTGATCAGAGT
rJMSF042J07+                                 AAAACACTTGAATAAGGATCAAGAGGCTGATCAGAGT
                      ____________________________________________________________
consensus             AACACATCTGGAGAAACTATCATAAAACACTTGAATAAGGATCAAGAGGCTGATCAGAGT
 
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rJMSF019D22+          AACTTCCGTGATCCGGAAACAAATGCAGAGTTGGAGGTTCAAGATAAGATGCCATTGTTA
rJMSF042J07+          AACTTCCGTGATCCGGAAACAAATGCAGAGTTGGAGGTTCAAGATAAGATGCCATTGTTA
                      ____________________________________________________________
consensus             AACTTCCGTGATCCGGAAACAAATGCAGAGTTGGAGGTTCAAGATAAGATGCCATTGTTA
 
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rJMSF019D22+          GAGTGGTTTGCAAATGAGTACAGGCGTTTTGGTTGCTCTTTGGAATTTGTTACCAACAAA
rJMSF042J07+          GAGTGGTTTGCAAATGAGTACAGGCGTTTTGGTTGCTCTTTGGAATTTGTTACCAACAAA
                      ____________________________________________________________
consensus             GAGTGGTTTGCAAATGAGTACAGGCGTTTTGGTTGCTCTTTGGAATTTGTTACCAACAAA
 
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rJMSF019D22+          TCTCAAGAAGGATCTCAGTTTTGTAGAGGTTTTGGTGGCATAGGGGGTATCTTGCGCTAT
rJMSF042J07+          TCTCAAGAAGGATCTCAGTTTTGTAGAGGTTTTGGTGGCATAGGGGGTATCTTGCGCTAT
                      ____________________________________________________________
consensus             TCTCAAGAAGGATCTCAGTTTTGTAGAGGTTTTGGTGGCATAGGGGGTATCTTGCGCTAT
 
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rJMSF019D22+          CAGCTTGATGTTCGAGCTTTTGATGACTTTTCTGATGATGGCGGAGTTTATGAGGACTCA
rJMSF042J07+          CAGCTTGATGTTCGAGCTTTTGATGACTTTTCTGATGATGGCGGAGTTTATGAGGACTCA
                      ____________________________________________________________
consensus             CAGCTTGATGTTCGAGCTTTTGATGACTTTTCTGATGATGGCGGAGTTTATGAGGACTCA
 
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rJMSF019D22+          GATTAGCAATTAATCAACAACTGCACTGCTGGTGCAGGGATGATGGAGTGGGGATCCTGC
rJMSF042J07+          GATTAGCAATTAATCAACAACTGCACTGCTGGTGCAGGGATGATGGAGTGGGGATCCTGC
                      ____________________________________________________________
consensus             GATTAGCAATTAATCAACAACTGCACTGCTGGTGCAGGGATGATGGAGTGGGGATCCTGC
 
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rJMSF019D22+          ACCAGTGCGCGAGGGCTCGCCCCTCTCTAAGGCCACTCATACATTACATGAAACATTCCT
rJMSF042J07+          ACCAGTGCGCGAGGGCTCGCCCCTCTCTAAGGCCACTCATACATTACATGAAACATTCCT
                      ____________________________________________________________
consensus             ACCAGTGCGCGAGGGCTCGCCCCTCTCTAAGGCCACTCATACATTACATGAAACATTCCT
 
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rJMSF019D22+          AGAAGCTGCTAACTTTAGTAATGCTGAAGAATTGAACGTGACTGATTTTAAGTGCAAAGA
rJMSF042J07+          AGAAGCTGCTAACTTTAGTAATGCTGAAGAATTGAACGTGACTGATTTTAAGTGCAAAGA
                      ____________________________________________________________
consensus             AGAAGCTGCTAACTTTAGTAATGCTGAAGAATTGAACGTGACTGATTTTAAGTGCAAAGA
 
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rJMSF019D22+          TGCCCCTTGGGTTTCTACGTAAACTTGGCATTTTGTGTACTGCGAATGGCTTATCCCCCC
rJMSF042J07+          TGCCCCTTGGGTTTCTACGTAAACTTGGCATTTTGTGTACTGCGAATGGCTTATCCCCCC
                      ____________________________________________________________
consensus             TGCCCCTTGGGTTTCTACGTAAACTTGGCATTTTGTGTACTGCGAATGGCTTATCCCCCC
 
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rJMSF019D22+          ACCTGTCTGCTCAGCGTATACAACAAAGATTCTTGTGTAGCAGCCATCCATCTAGGAAAG
rJMSF042J07+          ACCTGTCTGCTCAGCGTATACAACAAAGATTCTTGTGTAGCAGCCATCCATCTAGGAAAG
                      ____________________________________________________________
consensus             ACCTGTCTGCTCAGCGTATACAACAAAGATTCTTGTGTAGCAGCCATCCATCTAGGAAAG
 
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rJMSF019D22+          TTTCATTCAGGTTTGGAGGAATTAAGGTTTGCTGCTCATTTCACCTCATGAGAAATGACA
rJMSF042J07+          TTTCATTCAGGTTTGGAGGAATTAAGGTTTGCTGCTCATTTCACCTCATGAGAAATGACA
                      ____________________________________________________________
consensus             TTTCATTCAGGTTTGGAGGAATTAAGGTTTGCTGCTCATTTCACCTCATGAGAAATGACA
 
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rJMSF019D22+          TGTTACTTGTAGAGTTTAGAGTGCCATTACTATGCAGACCAGAGTAGAACCAGTTGAAAT
rJMSF042J07+          TGTTACTTGTAGAGTTTAGAGTGCCATTACTATGCAGA-CAGAGTAGAACCAGTTGAAAT
rJMCP010D05-                                        TATGCAGA-CAGAGTAGAACCAGTTGAAAT
rJMCP010D04-                                        TATGCAGA-CAGAGTAGAACCAGTTGAAAT
                      ____________________________________________________________
consensus             TGTTACTTGTAGAGTTTAGAGTGCCATTACTATGCAGA-CAGAGTAGAACCAGTTGAAAT
 
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rJMSF019D22+          TTA                                                         
rJMSF042J07+          TTACTGTAATAAAATTGTGGGGGTTGGATGAAACCCCCAAGATTGGGTACTGTTGTGTTG
rJMCP010D05-          TTACTGTAATAAAATTGTGGGGGTTGGATGAAACCCCCAAGATTGGGTACTGTTGTGTTG
rJMCP010D04-          TTACTGTAATAAAATTGTGGGGGTTGGATGAAACCCCCAAGATTGGGTACTGTTGTGTTG
                      ____________________________________________________________
consensus             TTACTGTAATAAAATTGTGGGGGTTGGATGAAACCCCCAAGATTGGGTACTGTTGTGTTG
 
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rJMSF042J07+          GATTATTGACTGCT                                              
rJMCP010D05-          GATTATTGACTGCTTGTCTCATGTTTTATTTTAAACTTTTAAGTT               
rJMCP010D04-          GATTATTGACTGCTTGTCTCATGTTTTATTTTAAACTTTTAAGTTCATCAAATTTTCTGG
                      ____________________________________________________________
consensus             GATTATTGACTGCTTGTCTCATGTTTTATTTTAAACTTTTAAGTTCATCAAATTTTCTGG