Contig 007265:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMCP010D04Sequence149007265 (4)
JMCP010D05Sequence134007265 (4)
JMSF019D22Sequence250013330 (3)emb|CBI19672.3|3e-05unnamed protein product [Vitis vinifera]750007265 (4)ref|XP_009630489.1|1e-62PREDICTED: eukaryotic peptide chain release factor subunit 1-3 [Nicotiana tomen
JMSF042J07Sequence789013330 (3)emb|CBI19672.3|7e-158unnamed protein product [Vitis vinifera]786007265 (4)ref|XP_009630489.1|9e-51PREDICTED: eukaryotic peptide chain release factor subunit 1-3 [Nicotiana tomen

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF019D22+ GACATCACAAGGTATGTGCTGAAAAAT
                      ____________________________________________________________
consensus GACATCACAAGGTATGTGCTGAAAAAT
 
. : . : . : . : . : . :
rJMSF019D22+ AACACATCTGGAGAAACTATCATAAAACACTTGAATAAGGATCAAGAGGCTGATCAGAGT
rJMSF042J07+ AAAACACTTGAATAAGGATCAAGAGGCTGATCAGAGT
                      ____________________________________________________________
consensus AACACATCTGGAGAAACTATCATAAAACACTTGAATAAGGATCAAGAGGCTGATCAGAGT
 
. : . : . : . : . : . :
rJMSF019D22+ AACTTCCGTGATCCGGAAACAAATGCAGAGTTGGAGGTTCAAGATAAGATGCCATTGTTA
rJMSF042J07+ AACTTCCGTGATCCGGAAACAAATGCAGAGTTGGAGGTTCAAGATAAGATGCCATTGTTA
                      ____________________________________________________________
consensus AACTTCCGTGATCCGGAAACAAATGCAGAGTTGGAGGTTCAAGATAAGATGCCATTGTTA
 
. : . : . : . : . : . :
rJMSF019D22+ GAGTGGTTTGCAAATGAGTACAGGCGTTTTGGTTGCTCTTTGGAATTTGTTACCAACAAA
rJMSF042J07+ GAGTGGTTTGCAAATGAGTACAGGCGTTTTGGTTGCTCTTTGGAATTTGTTACCAACAAA
                      ____________________________________________________________
consensus GAGTGGTTTGCAAATGAGTACAGGCGTTTTGGTTGCTCTTTGGAATTTGTTACCAACAAA
 
. : . : . : . : . : . :
rJMSF019D22+ TCTCAAGAAGGATCTCAGTTTTGTAGAGGTTTTGGTGGCATAGGGGGTATCTTGCGCTAT
rJMSF042J07+ TCTCAAGAAGGATCTCAGTTTTGTAGAGGTTTTGGTGGCATAGGGGGTATCTTGCGCTAT
                      ____________________________________________________________
consensus TCTCAAGAAGGATCTCAGTTTTGTAGAGGTTTTGGTGGCATAGGGGGTATCTTGCGCTAT
 
. : . : . : . : . : . :
rJMSF019D22+ CAGCTTGATGTTCGAGCTTTTGATGACTTTTCTGATGATGGCGGAGTTTATGAGGACTCA
rJMSF042J07+ CAGCTTGATGTTCGAGCTTTTGATGACTTTTCTGATGATGGCGGAGTTTATGAGGACTCA
                      ____________________________________________________________
consensus CAGCTTGATGTTCGAGCTTTTGATGACTTTTCTGATGATGGCGGAGTTTATGAGGACTCA
 
. : . : . : . : . : . :
rJMSF019D22+ GATTAGCAATTAATCAACAACTGCACTGCTGGTGCAGGGATGATGGAGTGGGGATCCTGC
rJMSF042J07+ GATTAGCAATTAATCAACAACTGCACTGCTGGTGCAGGGATGATGGAGTGGGGATCCTGC
                      ____________________________________________________________
consensus GATTAGCAATTAATCAACAACTGCACTGCTGGTGCAGGGATGATGGAGTGGGGATCCTGC
 
. : . : . : . : . : . :
rJMSF019D22+ ACCAGTGCGCGAGGGCTCGCCCCTCTCTAAGGCCACTCATACATTACATGAAACATTCCT
rJMSF042J07+ ACCAGTGCGCGAGGGCTCGCCCCTCTCTAAGGCCACTCATACATTACATGAAACATTCCT
                      ____________________________________________________________
consensus ACCAGTGCGCGAGGGCTCGCCCCTCTCTAAGGCCACTCATACATTACATGAAACATTCCT
 
. : . : . : . : . : . :
rJMSF019D22+ AGAAGCTGCTAACTTTAGTAATGCTGAAGAATTGAACGTGACTGATTTTAAGTGCAAAGA
rJMSF042J07+ AGAAGCTGCTAACTTTAGTAATGCTGAAGAATTGAACGTGACTGATTTTAAGTGCAAAGA
                      ____________________________________________________________
consensus AGAAGCTGCTAACTTTAGTAATGCTGAAGAATTGAACGTGACTGATTTTAAGTGCAAAGA
 
. : . : . : . : . : . :
rJMSF019D22+ TGCCCCTTGGGTTTCTACGTAAACTTGGCATTTTGTGTACTGCGAATGGCTTATCCCCCC
rJMSF042J07+ TGCCCCTTGGGTTTCTACGTAAACTTGGCATTTTGTGTACTGCGAATGGCTTATCCCCCC
                      ____________________________________________________________
consensus TGCCCCTTGGGTTTCTACGTAAACTTGGCATTTTGTGTACTGCGAATGGCTTATCCCCCC
 
. : . : . : . : . : . :
rJMSF019D22+ ACCTGTCTGCTCAGCGTATACAACAAAGATTCTTGTGTAGCAGCCATCCATCTAGGAAAG
rJMSF042J07+ ACCTGTCTGCTCAGCGTATACAACAAAGATTCTTGTGTAGCAGCCATCCATCTAGGAAAG
                      ____________________________________________________________
consensus ACCTGTCTGCTCAGCGTATACAACAAAGATTCTTGTGTAGCAGCCATCCATCTAGGAAAG
 
. : . : . : . : . : . :
rJMSF019D22+ TTTCATTCAGGTTTGGAGGAATTAAGGTTTGCTGCTCATTTCACCTCATGAGAAATGACA
rJMSF042J07+ TTTCATTCAGGTTTGGAGGAATTAAGGTTTGCTGCTCATTTCACCTCATGAGAAATGACA
                      ____________________________________________________________
consensus TTTCATTCAGGTTTGGAGGAATTAAGGTTTGCTGCTCATTTCACCTCATGAGAAATGACA
 
. : . : . : . : . : . :
rJMSF019D22+ TGTTACTTGTAGAGTTTAGAGTGCCATTACTATGCAGACCAGAGTAGAACCAGTTGAAAT
rJMSF042J07+ TGTTACTTGTAGAGTTTAGAGTGCCATTACTATGCAGA-CAGAGTAGAACCAGTTGAAAT
rJMCP010D05- TATGCAGA-CAGAGTAGAACCAGTTGAAAT
rJMCP010D04- TATGCAGA-CAGAGTAGAACCAGTTGAAAT
                      ____________________________________________________________
consensus TGTTACTTGTAGAGTTTAGAGTGCCATTACTATGCAGA-CAGAGTAGAACCAGTTGAAAT
 
. : . : . : . : . : . :
rJMSF019D22+ TTA
rJMSF042J07+ TTACTGTAATAAAATTGTGGGGGTTGGATGAAACCCCCAAGATTGGGTACTGTTGTGTTG
rJMCP010D05- TTACTGTAATAAAATTGTGGGGGTTGGATGAAACCCCCAAGATTGGGTACTGTTGTGTTG
rJMCP010D04- TTACTGTAATAAAATTGTGGGGGTTGGATGAAACCCCCAAGATTGGGTACTGTTGTGTTG
                      ____________________________________________________________
consensus TTACTGTAATAAAATTGTGGGGGTTGGATGAAACCCCCAAGATTGGGTACTGTTGTGTTG
 
. : . : . : . : . : . :
rJMSF042J07+ GATTATTGACTGCT
rJMCP010D05- GATTATTGACTGCTTGTCTCATGTTTTATTTTAAACTTTTAAGTT
rJMCP010D04- GATTATTGACTGCTTGTCTCATGTTTTATTTTAAACTTTTAAGTTCATCAAATTTTCTGG
                      ____________________________________________________________
consensus GATTATTGACTGCTTGTCTCATGTTTTATTTTAAACTTTTAAGTTCATCAAATTTTCTGG