Contig 007264:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMCP008H04Sequence607007264 (3)ref|XP_009621994.1|2e-41PREDICTED: uncharacterized protein LOC104113512 isoform X3 [Nicotiana tomentosi
JMCP017F03Sequence571007264 (3)ref|XP_009621993.1|9e-40PREDICTED: uncharacterized protein LOC104113512 isoform X2 [Nicotiana tomentosi
JMCP019G11Sequence568007264 (3)ref|XP_009621987.1|5e-40PREDICTED: uncharacterized protein LOC104113512 isoform X1 [Nicotiana tomentosi

Alignment

This contig is upended


. : . : . : . : . : . :
rJMCP008H04+ AGAGATG
                      ____________________________________________________________
consensus AGAGATG
 
. : . : . : . : . : . :
JMCP017F03+ GTATGCAGAAGTATTgattaaggtgaaT
rJMCP019G11+ GTATGCAGttGTtaagattaaggtgana
rJMCP008H04+ AAAGCAGAAGACAGTTGGAATTTCTTGAGAAAGTATGCAGAAGTATTCTAATTCCACTTT
                      ____________________________________________________________
consensus AAAGCAGAAGACAGTTGGAATTTCTTGAGAAAGTATGCAGAAGTATTCTAATTCCACTTT
 
. : . : . : . : . : . :
JMCP017F03+ TCAGTGTTTCTAGTTCCTTTACGGATCTTGTGAATGCTTTATTTATTCTCTCTGCAGGGT
rJMCP019G11+ agAGTGaaTCTtcaaggTTTACGctagaacTcttacCTaaATTTATTCagagaGCAGccT
rJMCP008H04+ TCAGTGTTTCTAGTTCCTTTACGGATCTTGTGAATGCTTTATTTATTCTCTCTGCAGGGT
                      ____________________________________________________________
consensus TCAGTGTTTCTAGTTCCTTTACGGATCTTGTGAATGCTTTATTTATTCTCTCTGCAGGGT
 
. : . : . : . : . : . :
JMCP017F03+ GGGGATCCACTAGAGTTCAAATATGGAAACGCTGCTTCGGTTAGTGTCCAATCCACCTCA
rJMCP019G11+ GGcctaggACTAGAGTTCAAATtaGGAAACGCTGCTTCGGTTAGTGTCgttaCCACCTCA
rJMCP008H04+ GGGGATCCACTAGAGTTCAAATATGGAAACGCTGCTTCGGTTAGTGTCCAATCCACCTCA
                      ____________________________________________________________
consensus GGGGATCCACTAGAGTTCAAATATGGAAACGCTGCTTCGGTTAGTGTCCAATCCACCTCA
 
. : . : . : . : . : . :
JMCP017F03+ CCAACAGATCAACAACCTGATCAATTTGTGACTAGGTATTTTTCCAGGGTTGTATTAGTA
rJMCP019G11+ CCAACAGATCAACAACCTGATCAATTTGTGACTAGGTATTTTTCCAGGGTTGTATTAGTA
rJMCP008H04+ CCAACGGATCAACAACCTGATCAATTTGTGACTAGGTATTTTTCCAGGGTTGTATTAGTA
                      ____________________________________________________________
consensus CCAACAGATCAACAACCTGATCAATTTGTGACTAGGTATTTTTCCAGGGTTGTATTAGTA
 
. : . : . : . : . : . :
JMCP017F03+ GCCTGTGATCATCCCTATATTTTCTATTATTCTAGTAATCGTCTATTTTTAAATTTCATT
rJMCP019G11+ GCCTGTGATCATCCCTATATTTTCTATTATTCTAGTAATCGTCTATTTTTAAATTTCATT
rJMCP008H04+ GCCTGTGATCATCCCTATATTTTCTATTATTCTAGTAATCGTCTATTTTTAAATTTCATT
                      ____________________________________________________________
consensus GCCTGTGATCATCCCTATATTTTCTATTATTCTAGTAATCGTCTATTTTTAAATTTCATT
 
. : . : . : . : . : . :
JMCP017F03+ GCAGTGAAGCAAAAGGTAGTTTTGCATTCACCGCATCACCTCATGAGGATTCTGTCGAAA
rJMCP019G11+ GCAGTGAAGCAAAAGGTAGTTTTGCATTCACCGCATCACCTCATGGGGATTCTGTCGAAG
rJMCP008H04+ GCAGTGAAGCAAAAGGTAGTTTTGCATTCACCGCATCACCTCATGGGGATTCTGTCGAAA
                      ____________________________________________________________
consensus GCAGTGAAGCAAAAGGTAGTTTTGCATTCACCGCATCACCTCATGGGGATTCTGTCGAAA
 
. : . : . : . : . : . :
JMCP017F03+ GTATACGAAGACCTGGAGCCACTCTAATTTGTGAACCAAACAGTGCTGATAACCTTATGC
rJMCP019G11+ GTATACGAAGACCTGGAGCCACTCTAATTTGTGAACCAAACAGTGCTGATAACCTTATGC
rJMCP008H04+ GTATACGAAGACCTGGAGCCACTCTAATTTGTGAACCAAACAGTGCTGATAACCTTATGC
                      ____________________________________________________________
consensus GTATACGAAGACCTGGAGCCACTCTAATTTGTGAACCAAACAGTGCTGATAACCTTATGC
 
. : . : . : . : . : . :
JMCP017F03+ TATTTGATGGTGAAAATGAATATGTTGAAGGTGAGCAACGTATATCTAGGAACCTTAGTA
rJMCP019G11+ TATTTGATGGTGAAAATGAATATGTTGAAGGTGAGCAACGTATATCTAGGAACCTTAGTA
rJMCP008H04+ TATTTGATGGTGAAAATGAATATGTTGAAGGTGAGCAACGTATATCTAGGAACCTTAGTA
                      ____________________________________________________________
consensus TATTTGATGGTGAAAATGAATATGTTGAAGGTGAGCAACGTATATCTAGGAACCTTAGTA
 
. : . : . : . : . : . :
JMCP017F03+ GGACTAGTACTGCTACGCCGGAGCAGTCAACCCGGATGGATGGAAATCAAAGTGCTAAGG
rJMCP019G11+ GGACTAGTACTGCTACGCCGGAGCAGTCAACCCGGATGGATGGAAATCAAAGTGCTAAGG
rJMCP008H04+ GGACTAGTACTGCTACGCCGGAGgtcTCAACCCGGATGGATGGAAATCAAAGTGCTAAGG
                      ____________________________________________________________
consensus GGACTAGTACTGCTACGCCGGAGCAGTCAACCCGGATGGATGGAAATCAAAGTGCTAAGG
 
. : . : . : . : . : . :
JMCP017F03+ AATTAGGAGATTCTGCAGCTTTTGAAGTTCCAAGAAAAGCATACAAGCGGCGTGTCAGGC
rJMCP019G11+ AATTAGGAGATTCTGCAGCTTTTGAAGTTCCAAGAAAAGCATACAAGCGGCGTGTCAGGC
rJMCP008H04+ AATTAGGAGATTCTGCAGCTTTTGAAGTTCgttGAAAAGCATACAAGCGGCGTGTCAGGC
                      ____________________________________________________________
consensus AATTAGGAGATTCTGCAGCTTTTGAAGTTCCAAGAAAAGCATACAAGCGGCGTGTCAGGC