Contig 007260:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF042N20-                                                         ACTACAAATGAAC
                      ____________________________________________________________
consensus                                                            ACTACAAATGAAC
 
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rJMFF042N20-          CTACACGTACATAATATGAATGTCGTTTTGAATCAAGATCCCCGATGCAGCGTGGACTAT
                      ____________________________________________________________
consensus             CTACACGTACATAATATGAATGTCGTTTTGAATCAAGATCCCCGATGCAGCGTGGACTAT
 
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rJMFF042N20-          ATAATTTGGCCACAAGGTCTGAGACATGTAAAGAAAAGTGTCTTAAAGTATTGGACATTA
rJMFF002P01-                                                           ATTGGACATTA
                      ____________________________________________________________
consensus             ATAATTTGGCCACAAGGTCTGAGACATGTAAAGAAAAGTGTCTTAAAGTATTGGACATTA
 
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rJMFF042N20-          TTGGCTAAAGGCCCAAAAGCAGCAGCAATATCACCAACAAGAATCTAAGGCTTAAATAAG
rJMFF002P01-          TTGGCTAAGGGCCCAAAAGCAGCAGCAATATCACCAACAAGAATCTAAGGCTTAAATAAG
                      ____________________________________________________________
consensus             TTGGCTAAGGGCCCAAAAGCAGCAGCAATATCACCAACAAGAATCTAAGGCTTAAATAAG
 
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rJMFF042N20-          GGACTAGAACACCTGCATATTTAGGGATTGCAATAATGTAACAACACAATAAAACATAAA
rJMFF002P01-          GGACTAGAACACCTGCATATTTAGGGATTGCAATAATGTAACAACACAATAAAACATAAA
                      ____________________________________________________________
consensus             GGACTAGAACACCTGCATATTTAGGGATTGCAATAATGTAACAACACAATAAAACATAAA
 
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rJMFF042N20-          TGGCAAACCTTATTTTTCTTCCCTCTAAAGTCTAAACACAAAACAATTAGACAACTACTC
rJMFF002P01-          TGGCAAACCTTATTTTTCTTCCCTCTAAAGTCTAAACACAAAACAATTAGACAACTACTC
JMFF042N20+                                                 CAAAACAATTAGACAACTACTC
JMFS152C03+                                                                     TC
                      ____________________________________________________________
consensus             TGGCAAACCTTATTTTTCTTCCCTCTAAAGTCTAAACACAAAACAATTAGACAACTACTC
 
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rJMFF042N20-          CAATAATACCACTTACCAAAATCTAACCTTATTGGCAAACCCCATTTTTATTCCCTCTTA
rJMFF002P01-          CAATAATACCACTTACCAAAATCTAACCTTATTGGCAAACCCCATTTTTATTCCCTCTTA
JMFF042N20+           CAATAATACCACTTACCAAAATCTAACCTTATTGGCAAACCCCATTTTTATTCCCTCTTA
JMFS152C03+           CAATAATACCACTTACCAAAATCTAACCTTATTGGCAAACCCCATTTTTATTCCCTCTTA
JMCP007G05+                                                AACCCCATTTTTATTCCCTCTTA
                      ____________________________________________________________
consensus             CAATAATACCACTTACCAAAATCTAACCTTATTGGCAAACCCCATTTTTATTCCCTCTTA
 
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rJMFF042N20-          CCAACACTAGGAAATTTTAGTTTACTTCACTTTGACACATAAACTAATGAGAAAACACTA
rJMFF002P01-          CCAACACTAGGAAATTTTAGTTTACTTCACTTTGACACATAAACTAATGAGAAAACACTA
JMFF042N20+           CCAACACTAGGAAATTTTAGTNTACTTCACTTTGACACATAAACTAATGAGAAAACACTA
JMFS152C03+           CCAACACTAGGAAATTTTAGTTTACTTCACTTTGACACATAAACTAATGAGAAAACACTA
JMCP007G05+           CCAACACTAGGAAATTTTAGTTTACTTCACTTTGACACATAAACTAATGAGAAAACACTA
                      ____________________________________________________________
consensus             CCAACACTAGGAAATTTTAGTTTACTTCACTTTGACACATAAACTAATGAGAAAACACTA
 
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rJMFF042N20-          ACATATCGCCACATCATCATCGTCATCGTCGTCTCTATTCCTTCTTGTTGAAGTACCGGA
rJMFF002P01-          ACATATCGCCACATCATCATCGTCATCGTCGTCTCTATTCCTTCTTGTTGAAGTACCGGA
JMFF042N20+           ACATATCGCCACATCATCATCGTCATCGTCGTCTCTATTCCTTCTTGTTGAAGTACCGGA
JMFS152C03+           ACATATCGCCACATCATCATCGTCATCGTCGTCTCTATTCCTTCTTGTTGAAGTACCGGA
JMCP007G05+           ACATATCGCCACATCATCATCGTCATCGTCGTCTCTATTCCTTCTTGTTGAAGTACCGGA
                      ____________________________________________________________
consensus             ACATATCGCCACATCATCATCGTCATCGTCGTCTCTATTCCTTCTTGTTGAAGTACCGGA
 
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rJMFF042N20-          ATCCAACCGCAAACCCCAATATCAGTAAAGGCAGCAAGAATTGCAATAGTGTCATCATAC
rJMFF002P01-          ATCCAACCGCAAACCCCAATATCAGTAAAGGCAGCAAGAATTGCAATAGTGTCATCATAC
JMFF042N20+           ATCCAACCGCAAACCCCAATATCAGTAAAGGCAGCAAGAATTGCAATAGTGTCATCATAC
JMFS152C03+           ATCCAACCGCAAACCCCAATATCAGTAAAGGCAGCAAGAATTGCAATAGTGTCATCATAC
JMCP007G05+           ATCCAACCGCAAACCCCAATATCAGTAAAGGCAGCAAGAATTGCAATAGTGTCATCATAC
                      ____________________________________________________________
consensus             ATCCAACCGCAAACCCCAATATCAGTAAAGGCAGCAAGAATTGCAATAGTGTCATCATAC
 
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rJMFF042N20-          CTCCCGATTTTTGCTTGGGTGCAAAGGATGTCGGAGGTGAAGTGTATATGGGTTTC    
rJMFF002P01-          CTCCCGATTTTTGCTTGGGTGCAGAGGATGTCGGAGGTGGAGTGTATATGGGTTTCTCCG
JMFF042N20+           CTCCCGATTTTTGCTTGGGTGCAGAGGATGTCGGAGGTGGAGTGTATATGGGTTTCTCCG
JMFS152C03+           CTCCCGATTTTTGCTTGGGTGCAGAGGATGTCGGAGGTGGAGTGTATATGGGTTTCTCCG
JMCP007G05+           CTCCCGATTTTTGCTTGGGTGCAGAGGATGTCGGAGGTGGAGTGTATATGGGTTTCTCCG
                      ____________________________________________________________
consensus             CTCCCGATTTTTGCTTGGGTGCAGAGGATGTCGGAGGTGGAGTGTATATGGGTTTCTCCG
 
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rJMFF002P01-          GCACAGTGTTGCTGTCAATATCACCAATATAGNATTTCTTCATCGNCTCTCTCGCATCAT
JMFF042N20+           GCACAGTGTTGCTGTCAATATCACCAATATAGTATTTCTTCATCGTCTCTCTCGCATCAT
JMFS152C03+           GCACAGTGTTGCTGTCAATATCACCAATATAGTATTTCTTCATCGTCTCTCTCGCATCAT
JMCP007G05+           GCACAGTGTTGCTGTCAATATCACCAATATAGTATTTCTTCATCGTCTCTCTCGCATCAT
                      ____________________________________________________________
consensus             GCACAGTGTTGCTGTCAATATCACCAATATAGTATTTCTTCATCGTCTCTCTCGCATCAT
 
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rJMFF002P01-          CGCTGTGCCCAATATCTTCAGAGNCATTGGTTGCATCCTTTCCCG               
JMFF042N20+           CGCTGTGCCCAATATCTTCAAAGTCATTGGTTGCATCCTTTCCCGTTGCAGTTAGGAGGA
JMFS152C03+           CGCTGTGCCCAATATCTTCAAAGTCATTGGTTGCATCCTTTCCCGTTGCAGTTAGGAGGA
JMCP007G05+           CGCTGTGCCCAATATCTTCAAAGTCATTGGTTGCATCCTTTCCCGTTGCAGTTAGGAGGA
                      ____________________________________________________________
consensus             CGCTGTGCCCAATATCTTCAAAGTCATTGGTTGCATCCTTTCCCGTTGCAGTTAGGAGGA
 
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JMFF042N20+           CATCGTCACCTCCAGGATGATCATCCAGATATGGAGTTACATTGTACACCTTTCCAGAGA
JMFS152C03+           CATCGTCACCTCCAGGATGATCATCCAGATATGGAGTTACATTGTACACCTTTCCAGAGA
JMCP007G05+           CATCGTCACCTCCAGGATGATCATCCAGATATGGAGTTACATTGTACACCTTTCCAGAGA
                      ____________________________________________________________
consensus             CATCGTCACCTCCAGGATGATCATCCAGATATGGAGTTACATTGTACACCTTTCCAGAGA
 
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JMFF042N20+           TTATAATCCAGCAATCATCTTTCTTATTGTGCTTAGAAACCTCCTCAAAGGAATGAACTT
JMFS152C03+           TTATAATCCAGCAATCATCTTTCTTATTGTGCTTAGAAACCTCCTCAAAGGAATGAACTT
JMCP007G05+           TTATAATCCAGCAATCATCTTTCTTATTGTGCTTAGAAACCTCCTCAAAGGAATGAACTT
                      ____________________________________________________________
consensus             TTATAATCCAGCAATCATCTTTCTTATTGTGCTTAGAAACCTCCTCAAAGGAATGAACTT
 
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JMFF042N20+           TGGCGTCGGAACTCATCTT                                         
JMFS152C03+           TGGCGTCGGAACTCATCTT----TTGAAGAGACGGGAATGGGGCTCTGGCTCTCGCTCGC
JMCP007G05+           TGGCGTCGGAACTCATCTTCAACTTGAAGAGACGGGAATGGGGCTCTGGCTCTCGCTCGC
                      ____________________________________________________________
consensus             TGGCGTCGGAACTCATCTTCAACTTGAAGAGACGGGAATGGGGCTCTGGCTCTCGCTCGC
 
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JMFS152C03+           AGGAAAGGCAACAGAATTCGCTAAAACTC                               
JMCP007G05+           AGGAAAGGCAACAGAATTCGCTAAAACTCCCAAGAATTTGGGTTTGTGAATCCCGAGGTG
                      ____________________________________________________________
consensus             AGGAAAGGCAACAGAATTCGCTAAAACTCCCAAGAATTTGGGTTTGTGAATCCCGAGGTG