Contig 007259:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMCP004B02Sequence616007259 (6)ref|XP_009786038.1|154PREDICTED: uncharacterized protein LOC104234204 [Nicotiana sylvestris]
JMCP004D04Sequence607007259 (6)ref|XP_009786038.1|154PREDICTED: uncharacterized protein LOC104234204 [Nicotiana sylvestris]
JMCP007D05Sequence399007259 (6)ref|XP_009786038.1|114PREDICTED: uncharacterized protein LOC104234204 [Nicotiana sylvestris]
JMCP007F03Sequence501007259 (6)ref|XP_009786038.1|155PREDICTED: uncharacterized protein LOC104234204 [Nicotiana sylvestris]
JMCP008B05Sequence609007259 (6)ref|XP_009786038.1|154PREDICTED: uncharacterized protein LOC104234204 [Nicotiana sylvestris]
JMCP009A10Sequence608007259 (6)ref|XP_009786038.1|154PREDICTED: uncharacterized protein LOC104234204 [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMCP009A10+ AGGACGC
rJMCP004D04+ AGGACGC
rJMCP008B05+ AGGACGC
JMCP004B02+ GATATGAGCAGctgcg
                      ____________________________________________________________
consensus GATATGAGCAGGACGC
 
. : . : . : . : . : . :
rJMCP009A10+ CCTTTCTCGAACTAGGCATCTCCCGGCGTTTCGAAAAGGAAGCTTACTTGGCCGCGTTTT
rJMCP004D04+ CCTTTCTCGAACTAGGCATCTCCCGGCGTTTCGAAAAGGAAGCTTACTTGGCCGCGTTTT
rJMCP008B05+ CCTTTCTCGAACTAGGCATCTCCCGGCGTTTCGAAAAGGAAGCTTACTTGGCCGCGTTTT
JMCP004B02+ ggaaTCTCGAACTAGGCAaCTCCCGGCGTTTCGAAAAGGAAGCTTACaaGGCCGCGTTTT
                      ____________________________________________________________
consensus CCTTTCTCGAACTAGGCATCTCCCGGCGTTTCGAAAAGGAAGCTTACTTGGCCGCGTTTT
 
. : . : . : . : . : . :
rJMCP009A10+ TATCTTGTTGGTCCAGAGACACCAACAAGAACCATTCGCCCAGAGACTTTCAAGATAGCA
rJMCP004D04+ TATCTTGTTGGTCCAGAGACACCAACAAGAACCATTCGCCCAGAGACTTTCAAGATAGCA
rJMCP008B05+ TATCTTGTTGGTCCAGAGACACCAACAAGAACCATTCGCCCAGAGACTTTCAAGATAGCA
rJMCP007F03+ CCAGAGACTaaCAAGATAGCA
JMCP004B02+ TATCTTGTTAGTCCAGAGACACCAACAAGAACCATTCGTCCAGAGACTTTCAAGATAGCA
                      ____________________________________________________________
consensus TATCTTGTTGGTCCAGAGACACCAACAAGAACCATTCGCCCAGAGACTTTCAAGATAGCA
 
. : . : . : . : . : . :
rJMCP009A10+ TGTATGATGGCTAAAGGAGATAAGATATGTCTTGCGGCTCCAGTACTTGCTAGTATTTAT
rJMCP004D04+ TGTATGATGGCTAAAGGAGATAAGATATGTCTTGCGGCTCCAGTACTTGCTAGTATTTAT
rJMCP008B05+ TGTATGATGGCTAAAGGAGATAAGATATGTCTTGCGGCTCCAGTACTTGCTAGTATTTAT
rJMCP007F03+ TGTATGtaccgTAttcctGATttGATATGTCTTGCGGCTCCAGTACTTGCTAGTATTTAT
JMCP004B02+ TGTATGATGGCTAAAGGAGATAAGATATGTCTTGCGGCTCCAGTACTTGCTAGTATTTAT
                      ____________________________________________________________
consensus TGTATGATGGCTAAAGGAGATAAGATATGTCTTGCGGCTCCAGTACTTGCTAGTATTTAT
 
. : . : . : . : . : . :
rJMCP009A10+ TCTGGTTTAAACTCAATCTCGGAATCCCACTCTCCTGGTCAAATAGGAGATCCTTTTCCA
rJMCP004D04+ TCTGGTTTAAACTCAATCTCGGAATCCCACTCTCCTGGTCAAATAGGAGATCCTTTTCCA
rJMCP008B05+ TCTGGTTTAAACTCAATCTCGGAATCCCACTCTCCTGGTCAAATAGGAGATCCTTTTCCA
rJMCP007D05+ GAATCgCACTgaggaccTCAAATtcctctaggaaaaggt
rJMCP007F03+ TCTGGTTTAAACTCAATCTCGGAATCCCACTCTCCTGGTCAAATAGGAGATCCTTTTCCA
JMCP004B02+ TCTGGTTTAAACTCAATCTCGGAATCCCACTCTCCTGGTCAAATAGGAGATCCTTTTCCA
                      ____________________________________________________________
consensus TCTGGTTTAAACTCAATCTCGGAATCCCACTCTCCTGGTCAAATAGGAGATCCTTTTCCA
 
. : . : . : . : . : . :
rJMCP009A10+ ATCCATTACGTGTACAGCTGGCTAGCAACTTACTACCAAACCCACTTTAAGACCCCCAGC
rJMCP004D04+ ATCCATTACGTGTACAGCTGGCTAGCAACTTACTACCAAACCCACTTTAAGACCCCCAGC
rJMCP008B05+ ATCCATTACGTGTACAGCTGGCTAGCAACTTACTACCAAACCCACTTTAAGACCCCCAGC
rJMCP007D05+ ATCCATTACGTGTACAGCTGGCTAGCAACTTACTACCAAACCCACTTTAAGACCCCCAGC
rJMCP007F03+ ATCCATTACGTGTACAGCTGGCTAGCAACTTACTACCAAACCCACTTTAAGACCCCCAGC
JMCP004B02+ ATCCATTACGTGTACAGCTGGCTAGCAACTTACTACCAAACCCACTTTAAGACCCCCAGC
                      ____________________________________________________________
consensus ATCCATTACGTGTACAGCTGGCTAGCAACTTACTACCAAACCCACTTTAAGACCCCCAGC
 
. : . : . : . : . : . :
rJMCP009A10+ TTCACGTTAGCAAACCCAAAGATGGTCACTAATTCTGGGGAAGGTGGTGCAAGGTATTAC
rJMCP004D04+ TTCACGTTAGCAAACCCAAAGATGGTCACTAATTCTGGGGAAGGTGGTGCAAGGTATTAC
rJMCP008B05+ TTCACGTTAGCAAACCCAAAGATGGTCACTAATTCTGGGGAAGGTGGTGCAAGGTATTAC
rJMCP007D05+ TTCACGTTAGCAAACCCAAAGATGGTCACTAATTCTGGGGAAGGTGGTGCAAGGTATTAC
rJMCP007F03+ TTCACGTTAGCAAACCCAAAGATGGTCACTAATTCTGGGGAAGGTGGTGCAAGGTATTAC
JMCP004B02+ TTCACGTTAGCAAACCCAAAGATGGTCACTAATTCTGGGGAAGGTGGTGCAAGGTATTAC
                      ____________________________________________________________
consensus TTCACGTTAGCAAACCCAAAGATGGTCACTAATTCTGGGGAAGGTGGTGCAAGGTATTAC
 
. : . : . : . : . : . :
rJMCP009A10+ ACCGAGATGGATGCCCGCAAGAAGATATTCAAAGGGGACGTTTCTTGGCTCTGCAACTCC
rJMCP004D04+ ACCGAGATGGATGCCCGCAAGAAGATATTCAAAGGGGACGTTTCTTGGCTCTGCAACTCC
rJMCP008B05+ ACCGAGATGGATGCCCGCAAGAAGATATTCAAAGGGGACGTTTCTTGGCTCTGCAACTCC
rJMCP007D05+ ACCGAGATGGATGCCCGCAAGAAGATATTCAAAGGGGACGTTTCTTGGCTCTGCAACTCC
rJMCP007F03+ ACCGAGATGGATGCCCGCAAGAAGATATTCAAAGGGGACGTTTCTTGGCTCTGCAACTCC
JMCP004B02+ ACCGAGATGGATGCCCGCAAGAAGATATTCAAAGGGGACGTTTCTTGGCTCTGCAACTCC
                      ____________________________________________________________
consensus ACCGAGATGGATGCCCGCAAGAAGATATTCAAAGGGGACGTTTCTTGGCTCTGCAACTCC
 
. : . : . : . : . : . :
rJMCP009A10+ CGCAAGGATAATAGAGATTTTATCTTTTACGACAACCGTAGAGGGAGTAGGGAAGACTTT
rJMCP004D04+ CGCAAGGATAATAGAGATTTTATCTTTTACGACAACCGTAGAGGGAGTAGGGAAGACTTT
rJMCP008B05+ CGCAAGGATAATAGAGATTTTATCTTTTACGACAACCGTAGAGGGAGTAGGGAAGACTTT
rJMCP007D05+ CGCAAGGATAATAGAGATTTTATCTTTTACGACAACCGTAGAGGGAGTAGGGAAGACTTT
rJMCP007F03+ CGCAAGGATAATAGAGATTTTATCTTTTACGACAACCGTAGAGGGAGTAGGGAAGACTTT
JMCP004B02+ CGCAAGGATAATAGAGATTTCATCTTTTACGACAACCGTAGAGGGAGTAGGGAAGACTTT
                      ____________________________________________________________
consensus CGCAAGGATAATAGAGATTTTATCTTTTACGACAACCGTAGAGGGAGTAGGGAAGACTTT
 
. : . : . : . : . : . :
rJMCP009A10+ GAGTACTTCATATGTTTGCGCCCCAGCTTCCTCGTTTTGCGCCGAGGGTCTCAATGCAAA
rJMCP004D04+ GAGTACTTCATATGTTTGCGCCCCAGCTTCCTCGTTTTGCGCCGAGGGTCTCAATGCAAA
rJMCP008B05+ GAGTACTTCATATGTTTGCGCCCCAGCTTCCTCGTTTTGCGCCGAGGGTCTCAATGCAAA
rJMCP007D05+ GAGTACTTCATATGTTTGCGCCCCAGCTTCCTCGTTTTGCGCCGAGGGTCTCAATGCAAA
rJMCP007F03+ GAGTACTTCATATGTTTGCGCCCCAGCTTCCTCGTTTTGCGCCGAGGGTCTCAATGCAAA
JMCP004B02+ GAGTACTTCATATGTTTGCGCCCCAGCTTCCTCGTTTTGCGCCGAGGGTCTCAATGCAAA
                      ____________________________________________________________
consensus GAGTACTTCATATGTTTGCGCCCCAGCTTCCTCGTTTTGCGCCGAGGGTCTCAATGCAAA
 
. : . : . : . : . : . :
rJMCP009A10+ GCTGAGCCTTACATGCCGCATCGCTTCAGTCGTCAATTTGGATTCTATCAAGCATATGCC
rJMCP004D04+ GCTGAGCCTTACATGCCGCATCGCTTCAGTCGTCAATTTGGATTCTATCAAGCATATGCC
rJMCP008B05+ GCTGAGCCTTACATGCCGCATCGCTTCAGTCGTCAATTTGGATTCTATCAAGCATATGCC
rJMCP007D05+ cgaGAGCCTTACATGCCGCATCGCTTCAGTCGTCAATTTGGATTCTATCAAGCATATGCC
rJMCP007F03+ GCTGAGCCTTACATGCCGCATCGCTTCAGTCGTCAATTTGGATTCTATCAAGCATATGCC
JMCP004B02+ GCTGAGCCTTACATGCCGCATCGCTTCAGTCGTCAATTTGGATTCTATCAAGCATATGCC
                      ____________________________________________________________
consensus GCTGAGCCTTACATGCCGCATCGCTTCAGTCGTCAATTTGGATTCTATCAAGCATATGCC