Contig 007259:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMCP004B02Sequence616007259 (6)ref|XP_009786038.1|154PREDICTED: uncharacterized protein LOC104234204 [Nicotiana sylvestris]
JMCP004D04Sequence607007259 (6)ref|XP_009786038.1|154PREDICTED: uncharacterized protein LOC104234204 [Nicotiana sylvestris]
JMCP007D05Sequence399007259 (6)ref|XP_009786038.1|114PREDICTED: uncharacterized protein LOC104234204 [Nicotiana sylvestris]
JMCP007F03Sequence501007259 (6)ref|XP_009786038.1|155PREDICTED: uncharacterized protein LOC104234204 [Nicotiana sylvestris]
JMCP008B05Sequence609007259 (6)ref|XP_009786038.1|154PREDICTED: uncharacterized protein LOC104234204 [Nicotiana sylvestris]
JMCP009A10Sequence608007259 (6)ref|XP_009786038.1|154PREDICTED: uncharacterized protein LOC104234204 [Nicotiana sylvestris]

Alignment

This contig is upended


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rJMCP009A10+                                                               AGGACGC
rJMCP004D04+                                                               AGGACGC
rJMCP008B05+                                                               AGGACGC
JMCP004B02+                                                       GATATGAGCAGctgcg
                      ____________________________________________________________
consensus                                                         GATATGAGCAGGACGC
 
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rJMCP009A10+          CCTTTCTCGAACTAGGCATCTCCCGGCGTTTCGAAAAGGAAGCTTACTTGGCCGCGTTTT
rJMCP004D04+          CCTTTCTCGAACTAGGCATCTCCCGGCGTTTCGAAAAGGAAGCTTACTTGGCCGCGTTTT
rJMCP008B05+          CCTTTCTCGAACTAGGCATCTCCCGGCGTTTCGAAAAGGAAGCTTACTTGGCCGCGTTTT
JMCP004B02+           ggaaTCTCGAACTAGGCAaCTCCCGGCGTTTCGAAAAGGAAGCTTACaaGGCCGCGTTTT
                      ____________________________________________________________
consensus             CCTTTCTCGAACTAGGCATCTCCCGGCGTTTCGAAAAGGAAGCTTACTTGGCCGCGTTTT
 
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rJMCP009A10+          TATCTTGTTGGTCCAGAGACACCAACAAGAACCATTCGCCCAGAGACTTTCAAGATAGCA
rJMCP004D04+          TATCTTGTTGGTCCAGAGACACCAACAAGAACCATTCGCCCAGAGACTTTCAAGATAGCA
rJMCP008B05+          TATCTTGTTGGTCCAGAGACACCAACAAGAACCATTCGCCCAGAGACTTTCAAGATAGCA
rJMCP007F03+                                                 CCAGAGACTaaCAAGATAGCA
JMCP004B02+           TATCTTGTTAGTCCAGAGACACCAACAAGAACCATTCGTCCAGAGACTTTCAAGATAGCA
                      ____________________________________________________________
consensus             TATCTTGTTGGTCCAGAGACACCAACAAGAACCATTCGCCCAGAGACTTTCAAGATAGCA
 
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rJMCP009A10+          TGTATGATGGCTAAAGGAGATAAGATATGTCTTGCGGCTCCAGTACTTGCTAGTATTTAT
rJMCP004D04+          TGTATGATGGCTAAAGGAGATAAGATATGTCTTGCGGCTCCAGTACTTGCTAGTATTTAT
rJMCP008B05+          TGTATGATGGCTAAAGGAGATAAGATATGTCTTGCGGCTCCAGTACTTGCTAGTATTTAT
rJMCP007F03+          TGTATGtaccgTAttcctGATttGATATGTCTTGCGGCTCCAGTACTTGCTAGTATTTAT
JMCP004B02+           TGTATGATGGCTAAAGGAGATAAGATATGTCTTGCGGCTCCAGTACTTGCTAGTATTTAT
                      ____________________________________________________________
consensus             TGTATGATGGCTAAAGGAGATAAGATATGTCTTGCGGCTCCAGTACTTGCTAGTATTTAT
 
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rJMCP009A10+          TCTGGTTTAAACTCAATCTCGGAATCCCACTCTCCTGGTCAAATAGGAGATCCTTTTCCA
rJMCP004D04+          TCTGGTTTAAACTCAATCTCGGAATCCCACTCTCCTGGTCAAATAGGAGATCCTTTTCCA
rJMCP008B05+          TCTGGTTTAAACTCAATCTCGGAATCCCACTCTCCTGGTCAAATAGGAGATCCTTTTCCA
rJMCP007D05+                               GAATCgCACTgaggaccTCAAATtcctctaggaaaaggt
rJMCP007F03+          TCTGGTTTAAACTCAATCTCGGAATCCCACTCTCCTGGTCAAATAGGAGATCCTTTTCCA
JMCP004B02+           TCTGGTTTAAACTCAATCTCGGAATCCCACTCTCCTGGTCAAATAGGAGATCCTTTTCCA
                      ____________________________________________________________
consensus             TCTGGTTTAAACTCAATCTCGGAATCCCACTCTCCTGGTCAAATAGGAGATCCTTTTCCA
 
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rJMCP009A10+          ATCCATTACGTGTACAGCTGGCTAGCAACTTACTACCAAACCCACTTTAAGACCCCCAGC
rJMCP004D04+          ATCCATTACGTGTACAGCTGGCTAGCAACTTACTACCAAACCCACTTTAAGACCCCCAGC
rJMCP008B05+          ATCCATTACGTGTACAGCTGGCTAGCAACTTACTACCAAACCCACTTTAAGACCCCCAGC
rJMCP007D05+          ATCCATTACGTGTACAGCTGGCTAGCAACTTACTACCAAACCCACTTTAAGACCCCCAGC
rJMCP007F03+          ATCCATTACGTGTACAGCTGGCTAGCAACTTACTACCAAACCCACTTTAAGACCCCCAGC
JMCP004B02+           ATCCATTACGTGTACAGCTGGCTAGCAACTTACTACCAAACCCACTTTAAGACCCCCAGC
                      ____________________________________________________________
consensus             ATCCATTACGTGTACAGCTGGCTAGCAACTTACTACCAAACCCACTTTAAGACCCCCAGC
 
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rJMCP009A10+          TTCACGTTAGCAAACCCAAAGATGGTCACTAATTCTGGGGAAGGTGGTGCAAGGTATTAC
rJMCP004D04+          TTCACGTTAGCAAACCCAAAGATGGTCACTAATTCTGGGGAAGGTGGTGCAAGGTATTAC
rJMCP008B05+          TTCACGTTAGCAAACCCAAAGATGGTCACTAATTCTGGGGAAGGTGGTGCAAGGTATTAC
rJMCP007D05+          TTCACGTTAGCAAACCCAAAGATGGTCACTAATTCTGGGGAAGGTGGTGCAAGGTATTAC
rJMCP007F03+          TTCACGTTAGCAAACCCAAAGATGGTCACTAATTCTGGGGAAGGTGGTGCAAGGTATTAC
JMCP004B02+           TTCACGTTAGCAAACCCAAAGATGGTCACTAATTCTGGGGAAGGTGGTGCAAGGTATTAC
                      ____________________________________________________________
consensus             TTCACGTTAGCAAACCCAAAGATGGTCACTAATTCTGGGGAAGGTGGTGCAAGGTATTAC
 
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rJMCP009A10+          ACCGAGATGGATGCCCGCAAGAAGATATTCAAAGGGGACGTTTCTTGGCTCTGCAACTCC
rJMCP004D04+          ACCGAGATGGATGCCCGCAAGAAGATATTCAAAGGGGACGTTTCTTGGCTCTGCAACTCC
rJMCP008B05+          ACCGAGATGGATGCCCGCAAGAAGATATTCAAAGGGGACGTTTCTTGGCTCTGCAACTCC
rJMCP007D05+          ACCGAGATGGATGCCCGCAAGAAGATATTCAAAGGGGACGTTTCTTGGCTCTGCAACTCC
rJMCP007F03+          ACCGAGATGGATGCCCGCAAGAAGATATTCAAAGGGGACGTTTCTTGGCTCTGCAACTCC
JMCP004B02+           ACCGAGATGGATGCCCGCAAGAAGATATTCAAAGGGGACGTTTCTTGGCTCTGCAACTCC
                      ____________________________________________________________
consensus             ACCGAGATGGATGCCCGCAAGAAGATATTCAAAGGGGACGTTTCTTGGCTCTGCAACTCC
 
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rJMCP009A10+          CGCAAGGATAATAGAGATTTTATCTTTTACGACAACCGTAGAGGGAGTAGGGAAGACTTT
rJMCP004D04+          CGCAAGGATAATAGAGATTTTATCTTTTACGACAACCGTAGAGGGAGTAGGGAAGACTTT
rJMCP008B05+          CGCAAGGATAATAGAGATTTTATCTTTTACGACAACCGTAGAGGGAGTAGGGAAGACTTT
rJMCP007D05+          CGCAAGGATAATAGAGATTTTATCTTTTACGACAACCGTAGAGGGAGTAGGGAAGACTTT
rJMCP007F03+          CGCAAGGATAATAGAGATTTTATCTTTTACGACAACCGTAGAGGGAGTAGGGAAGACTTT
JMCP004B02+           CGCAAGGATAATAGAGATTTCATCTTTTACGACAACCGTAGAGGGAGTAGGGAAGACTTT
                      ____________________________________________________________
consensus             CGCAAGGATAATAGAGATTTTATCTTTTACGACAACCGTAGAGGGAGTAGGGAAGACTTT
 
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rJMCP009A10+          GAGTACTTCATATGTTTGCGCCCCAGCTTCCTCGTTTTGCGCCGAGGGTCTCAATGCAAA
rJMCP004D04+          GAGTACTTCATATGTTTGCGCCCCAGCTTCCTCGTTTTGCGCCGAGGGTCTCAATGCAAA
rJMCP008B05+          GAGTACTTCATATGTTTGCGCCCCAGCTTCCTCGTTTTGCGCCGAGGGTCTCAATGCAAA
rJMCP007D05+          GAGTACTTCATATGTTTGCGCCCCAGCTTCCTCGTTTTGCGCCGAGGGTCTCAATGCAAA
rJMCP007F03+          GAGTACTTCATATGTTTGCGCCCCAGCTTCCTCGTTTTGCGCCGAGGGTCTCAATGCAAA
JMCP004B02+           GAGTACTTCATATGTTTGCGCCCCAGCTTCCTCGTTTTGCGCCGAGGGTCTCAATGCAAA
                      ____________________________________________________________
consensus             GAGTACTTCATATGTTTGCGCCCCAGCTTCCTCGTTTTGCGCCGAGGGTCTCAATGCAAA
 
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rJMCP009A10+          GCTGAGCCTTACATGCCGCATCGCTTCAGTCGTCAATTTGGATTCTATCAAGCATATGCC
rJMCP004D04+          GCTGAGCCTTACATGCCGCATCGCTTCAGTCGTCAATTTGGATTCTATCAAGCATATGCC
rJMCP008B05+          GCTGAGCCTTACATGCCGCATCGCTTCAGTCGTCAATTTGGATTCTATCAAGCATATGCC
rJMCP007D05+          cgaGAGCCTTACATGCCGCATCGCTTCAGTCGTCAATTTGGATTCTATCAAGCATATGCC
rJMCP007F03+          GCTGAGCCTTACATGCCGCATCGCTTCAGTCGTCAATTTGGATTCTATCAAGCATATGCC
JMCP004B02+           GCTGAGCCTTACATGCCGCATCGCTTCAGTCGTCAATTTGGATTCTATCAAGCATATGCC
                      ____________________________________________________________
consensus             GCTGAGCCTTACATGCCGCATCGCTTCAGTCGTCAATTTGGATTCTATCAAGCATATGCC