Contig 007256:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF039M05Sequence609006756 (3)gb|AFU52654.1|4e-78beta-1,3-glucanase 21 [Solanum tuberosum]741007256 (4)ref|XP_009631831.1|2e-63PREDICTED: glucan endo-1,3-beta-glucosidase 4 [Nicotiana tomentosiformis] ref|XP
JMSF043N03Sequence689019008760007256 (4)ref|XP_009631831.1|1e-51PREDICTED: glucan endo-1,3-beta-glucosidase 4 [Nicotiana tomentosiformis] ref|XP
JMSF052E10Sequence702006756 (3)gb|AFU52654.1|5e-93beta-1,3-glucanase 21 [Solanum tuberosum]907007256 (4)ref|XP_009631831.1|2e-83PREDICTED: glucan endo-1,3-beta-glucosidase 4 [Nicotiana tomentosiformis] ref|XP
JMSF052P03Sequence703006756 (3)gb|AFU52654.1|2e-96beta-1,3-glucanase 21 [Solanum tuberosum]953007256 (4)ref|XP_009631831.1|2e-84PREDICTED: glucan endo-1,3-beta-glucosidase 4 [Nicotiana tomentosiformis] ref|XP

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF052P03+ ATCCTAACACCCTTTTTNCACTATGAGAGCATGCTCGATGCCTT
                      ____________________________________________________________
consensus ATCCTAACACCCTTTTTNCACTATGAGAGCATGCTCGATGCCTT
 
. : . : . : . : . : . :
rJMSF052P03+ GGTGGATGCTACGTATAATGCTATTGCAGCTTTCAATTTCTCGAATATCCCCCGTTGTTG
rJMSF052E10+ GTTGTTG
                      ____________________________________________________________
consensus GGTGGATGCTACGTATAATGCTATTGCAGCTTTCAATTTCTCGAATATCCCCCGTTGTTG
 
. : . : . : . : . : . :
rJMSF052P03+ TGACAGAAACCGGTTGGCCTTGGTTTGGCAGCACGAGTGAGCCCGATGCTACTGTAGAAA
rJMSF052E10+ TGACAGAAACCGGTTGGCCTTGGTTTGGCAGCACGAGTGAGCCCGATGCTACTGTAGAAA
                      ____________________________________________________________
consensus TGACAGAAACCGGTTGGCCTTGGTTTGGCAGCACGAGTGAGCCCGATGCTACTGTAGAAA
 
. : . : . : . : . : . :
rJMFF039M05+ GTTTCGAATGATACCGGTCCCCCGA
rJMSF052P03+ ACGCGGGGGCTTACAACAATAACTTGATCCGCCGTGTTTCGAATGATACCGGTCCCCCGA
rJMSF052E10+ ACGCGGGGGCTTACAACAATAACTTGATCCGCCGTGTTTCGAATGATACCGGTCCCCCGA
                      ____________________________________________________________
consensus ACGCGGGGGCTTACAACAATAACTTGATCCGCCGTGTTTCGAATGATACCGGTCCCCCGA
 
. : . : . : . : . : . :
rJMFF039M05+ GTGAGCTGAAAATGCCCATCCATGCTTATATTTACGAGTTGTTTAACGAAGACAAAAGGC
rJMSF052P03+ GTGAGCTGAAAATGCCCATCCATGCTTATATTTACGAGTTGTTTAACGAAGACAAAAGGC
rJMSF043N03+ TTTAACGAAGACAAAAGGC
rJMSF052E10+ GTGAGCTGAAAATGCCCATCCATGCTTATATTTACGAGTTGTTTAACGAAGACAAAAGGC
                      ____________________________________________________________
consensus GTGAGCTGAAAATGCCCATCCATGCTTATATTTACGAGTTGTTTAACGAAGACAAAAGGC
 
. : . : . : . : . : . :
rJMFF039M05+ CCGGGCCAGTCTCGGAAAGAAGCTGGGGAATCTTTTTCCCTAATGGCAGTGCGGTTTATC
rJMSF052P03+ CCGGGCCAGTCTCGGAAAGAAGCTGGGGAATCTTTTTCCCTAATGGCAGTGCGGTTTATC
rJMSF043N03+ CCGGGCCAGTCTCGGAAAGAAGCTGGGGAATCTTTTTCCCTAATGGCAGTGCGGTTTATC
rJMSF052E10+ CCGGGCCAGTCTCGGAAAGAAGCTGGGGAATCTTTTTCCCTAATGGCAGTGCGGTTTATC
                      ____________________________________________________________
consensus CCGGGCCAGTCTCGGAAAGAAGCTGGGGAATCTTTTTCCCTAATGGCAGTGCGGTTTATC
 
. : . : . : . : . : . :
rJMFF039M05+ CTATTAATTTGGGCGGTTCAAGTGCAGGCCAAATTGCTAATAATTCTTCAGCCGGGGTTT
rJMSF052P03+ CTATTAATTTGGGCGGTTCAAGTGCAGGCCAAATTGCTAATAATTCTTCAGCCGGGGTTT
rJMSF043N03+ CTATTAATTTGGGCGGTTCAAGTGCAGGCCAAATTGCTAATAATTCTTCAGCCGGGGTTT
rJMSF052E10+ CTATTAATTTGGGCGGTTCAAGTGCAGGCCAAATTGCTAATAATTCTTCAGCCGGGGTTT
                      ____________________________________________________________
consensus CTATTAATTTGGGCGGTTCAAGTGCAGGCCAAATTGCTAATAATTCTTCAGCCGGGGTTT
 
. : . : . : . : . : . :
rJMFF039M05+ TCTGTATAGCTCAGCCAGGCGCGAGTGAAAATAAGTTGCAAAAGGGAATCGACTGGGCAT
rJMSF052P03+ TCTGTATAGCTCAGCCAGGCGCGAGTGAAAATAAGTTGCAAAAGGGAATCGACTGGGCAT
rJMSF043N03+ TCTGTATAGCTCAGCCAGGCGCGAGTGAAAATAAGTTGCAAAAGGGAATCGACTGGGCAT
rJMSF052E10+ TCTGTATAGCTCAGCCAGGCGCGAGTGAAAATAAGTTGCAAAAGGGAATCGACTGGGCAT
                      ____________________________________________________________
consensus TCTGTATAGCTCAGCCAGGCGCGAGTGAAAATAAGTTGCAAAAGGGAATCGACTGGGCAT
 
. : . : . : . : . : . :
rJMFF039M05+ GTGGGCCCCAGGGAAATGCTAACTGCTCGGCAATTCAACCGGGACAGCCTTGCTATTCCC
rJMSF052P03+ GTGGGCCCCAGGGAAATGCTAACTGCTCGGCAATTCAACCGGGACAGCCTTGCTATTCCC
rJMSF043N03+ GTGGGCCCCAGGGAAATGCTAACTGCTCGGCAATTCAACCGGGACAGCCTTGCTATTCCC
rJMSF052E10+ GTGGGCCCCAGGGAAATGCTAACTGCTCGGCAATTCAACCGGGACAGCCTTGCTATTCCC
                      ____________________________________________________________
consensus GTGGGCCCCAGGGAAATGCTAACTGCTCGGCAATTCAACCGGGACAGCCTTGCTATTCCC
 
. : . : . : . : . : . :
rJMFF039M05+ CCGATACTCTGCAAAATCACGCTTCTTATGCCTACAATGACTATTATCAGAGAGTGCAAA
rJMSF052P03+ CCGATACTCTGCAAAATCACGCTTCTTATGCCTACAATGACTATTATCAGAGAGTGCAAA
rJMSF043N03+ CCGATACTCTGCAAAATCACGCTTCTTATGCCTACAATGACTATTATCAGAGAGTGCAAA
rJMSF052E10+ CCGATACTCTGCAAAATCACGCTTCTTATGCCTACAATGACTATTATCAGAGAGTGCAAA
                      ____________________________________________________________
consensus CCGATACTCTGCAAAATCACGCTTCTTATGCCTACAATGACTATTATCAGAGAGTGCAAA
 
. : . : . : . : . : . :
rJMFF039M05+ GCGTCGGTGGAACTTGTGACTTTGATGGTACAGCAACGACAACTACAGTGGACCCCAGTT
rJMSF052P03+ GCGTCGGTGGAACTTGTGACTTTGATGGTACAGCAACGACAACTACAGTGGACCCCAGTT
rJMSF043N03+ GCGTCGGTGGAACTTGTGACTTTGATGGTACAGCAACGACAACTACAGTGGACCCCAGTT
rJMSF052E10+ GCGTCGGTGGAACTTGTGACTTTGATGGTACAGCAACGACAACTACAGTGGACCCCAGTT
                      ____________________________________________________________
consensus GCGTCGGTGGAACTTGTGACTTTGATGGTACAGCAACGACAACTACAGTGGACCCCAGTT
 
. : . : . : . : . : . :
rJMFF039M05+ ACGGGTCATGCATATTCACGGGAAGTTCAAATTCAAGCATTGGCGGTGTGCCCACACCGG
rJMSF052P03+ ACGGGTCATGCATATTCACGGGAAGTTCAAATTCAAGCATTGGCGGTGTGCCCACACCGG
rJMSF043N03+ ACGGGTCATGCATATTCACGGGAAGTTCAAATTCAAGCATTGGCGGTGTGCCCACACCGG
rJMSF052E10+ ACGGGTCATGCATATTCACGGGAAGTTCAAATTCAAGCATTGGCGGTGTGCCCACACCGG
                      ____________________________________________________________
consensus ACGGGTCATGCATATTCACGGGAAGTTCAAATTCAAGCATTGGCGGTGTGCCCACACCGG
 
. : . : . : . : . : . :
rJMFF039M05+ CTTTCGGACCGACAGCCCCAGTAGGTAAAGGCTCAATGGCTCGAGCGCCTGATATTGGGC
rJMSF052P03+ CTTTCGGACCGACAGCCCCAGTAGGTAAAGGCTCAATGGCTCGAGCGCCTGATATTGGGC
rJMSF043N03+ CTTTCGGACCGACAGCCCCAGTAGGTAAAGGCTCAATGGCTCGAGCGCCTGATATTGGGC
rJMSF052E10+ CTTTCGGACCGACAGCCCCAGTAGGTAAAGGCTCAATGGCTCGAGCGCCTGATATTGGGC
                      ____________________________________________________________
consensus CTTTCGGACCGACAGCCCCAGTAGGTAAAGGCTCAATGGCTCGAGCGCCTGATATTGGGC
 
. : . : . : . : . : . :
rJMFF039M05+ GCGTTTTAGCAGTGCTGTTAGCTCTCGTGTTCCTTGAAGCGAAGGGTAATGTGCTTTTGT
rJMSF052P03+ GCGTTTTAGCAGTGCTGTTAGCTCTCGTGTTCCTTGAAGCGAAGGGTAATGTGCTTTTGT
rJMSF043N03+ GCGTTTTAGCAGTGCTGTTAGCTCTCGTGTTCCTTGAAGCGAAGGGTAATGTGCTTTTGT
rJMSF052E10+ GCGTTTTAGCAGTGCTGTTAGCTCTCGTGTTCCTTGAAGCGAAGGGTAATGTGCTTTTGT
                      ____________________________________________________________
consensus GCGTTTTAGCAGTGCTGTTAGCTCTCGTGTTCCTTGAAGCGAAGGGTAATGTGCTTTTGT
 
. : . : . : . : . : . :
rJMFF039M05+ AGTGTCGTGATCTTGGTTTCGGGAATGCTTTGTAAGTTGTAAGGCATGGGAAATATAGTT
rJMSF052P03+ AGTGTCGTGATCTTGGTTTCGGGAATGCTTTGTAAGTTGTAAGGCATGGGAAATATAGTT
rJMSF043N03+ AGTGTCGTGATCTTGGTTTCGGGAATGCTTTGTAAGTTGTAAGGCATGGGAAATATAGTT
rJMSF052E10+ AGTGTCGTGATCTTGGTTTCGGGAATGCTTTGTAAGTTGTAAGGCATGGGAAATATAGTT
                      ____________________________________________________________
consensus AGTGTCGTGATCTTGGTTTCGGGAATGCTTTGTAAGTTGTAAGGCATGGGAAATATAGTT
 
. : . : . : . : . : . :
rJMFF039M05+ AGGAGTTGAAGCAGCTTTTAGCTTTGTTGAAAATACACCATTTTTGGGGTTCATAT
rJMSF052P03+ AGGAGTTGAAGCAGCTTTTAGCTTTGTTGAAAATACACCATTTTTGGGGTTCATATTCTC
rJMSF043N03+ AGGAGTTGAAGCAGCTTTTAGCTTTGTTGAAAATACACCATTTTTGGGGTTCATATTCTC
rJMSF052E10+ AGGAGTTGAAGCAGCTTTTAGCTTTGTTGAAAATACACCATTTTTGGGGTTCATATTCTC
                      ____________________________________________________________
consensus AGGAGTTGAAGCAGCTTTTAGCTTTGTTGAAAATACACCATTTTTGGGGTTCATATTCTC
 
. : . : . : . : . : . :
rJMSF052P03+ CATTT
rJMSF043N03+ CATTTTGTTATCATGCTAGTGAAAAGCT
rJMSF052E10+ CATTTTGTTATCATGCTAGTGAAAAGCTTAAAGCCTTTGCATTCTTGGTAAAGAACATTT
                      ____________________________________________________________
consensus CATTTTGTTATCATGCTAGTGAAAAGCTTAAAGCCTTTGCATTCTTGGTAAAGAACATTT