| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF051I17 | Sequence | 496 | 007253 (6) | ref|XP_011071703.1| | 52.8 | PREDICTED: uncharacterized protein LOC105157100 [Sesamum indicum] | |||||
| JMSF009L21 | Sequence | 294 | 007253 (6) | ref|XP_011071703.1| | 45.4 | PREDICTED: uncharacterized protein LOC105157100 [Sesamum indicum] | 611 | 007253 (6) | ref|XP_011071703.1| | 52.8 | PREDICTED: uncharacterized protein LOC105157100 [Sesamum indicum] |
| JMSF038G16 | Sequence | 678 | 007253 (6) | ref|XP_011071703.1| | 53.1 | PREDICTED: uncharacterized protein LOC105157100 [Sesamum indicum] | 733 | 007253 (6) | ref|XP_011071703.1| | 53.1 | PREDICTED: uncharacterized protein LOC105157100 [Sesamum indicum] |
| JMSF051H10 | Sequence | 670 | 021198 | ref|XP_002514747.1| | 4e-04 | conserved hypothetical protein [Ricinus communis] gb|EEF47853.1| conserved hypot | 718 | 007253 (6) | ref|XP_002514747.1| | 5e-04 | conserved hypothetical protein [Ricinus communis] gb|EEF47853.1| conserved hypot |
This contig is upended
. : . : . : . : . : . :
JMSF009L21- GACCCAGCAATTGATCAAACT
rJMSF009L21+ AGCAATTGATCAAACT
JMSF038G16- AGCAATTGATCAAACT
rJMSF038G16+ AGCAATTGATCAAACT
____________________________________________________________
consensus GACCCAGCAATTGATCAAACT
. : . : . : . : . : . :
JMSF009L21- GGGAGAGGAGAGGAAGAAGAACACTGTTCTGTAGCTATGGCTACCACTTCATCGTCATCA
rJMSF009L21+ GGGAGAGGAGAGGAAGAAGAACACTGTTCTGTAGCTATGGCTACCACTTCATCGTCATCA
JMSF038G16- GGGAGAGGAGAGGAAGAAGAACACTGTTCTGTAGCTATGGCTACCACTTCATCGTCATCA
rJMSF038G16+ GGGAGAGGAGAGGAAGAAGAACACTGTTCTGTAGCTATGGCTACCACTTCATCGTCATCA
____________________________________________________________
consensus GGGAGAGGAGAGGAAGAAGAACACTGTTCTGTAGCTATGGCTACCACTTCATCGTCATCA
. : . : . : . : . : . :
JMSF009L21- TCTCTTCATCTGCTACTCATCTTCTTGTGCTTTTCTCACCTTCTGATTTCCATGGCTGCA
rJMSF009L21+ TCTCTTCATCTGCTACTCATCTTCTTGTGCTTTTCTCACCTTCTGATTTCCATGGCTGCA
JMSF038G16- TCTCTTCATCTGCTACTCATCTTCTTGTGCTTTTCTCACCTTCTGATTTCCATGGCTGCA
rJMSF038G16+ TCTCTTCATCTGCTACTCATCTTCTTGTGCTTTTCTCACCTTCTGATTTCCATGGCTGCA
____________________________________________________________
consensus TCTCTTCATCTGCTACTCATCTTCTTGTGCTTTTCTCACCTTCTGATTTCCATGGCTGCA
. : . : . : . : . : . :
JMSF009L21- GCCATCCCACTTACAAGAACCAGAAATCTGCAGACTCAAGAATATGAAGAACCTAGTTTT
rJMSF009L21+ GCCATCCCACTTACAAGAACCAGAAATCTGCAGACTCAAGAATATGAAGAACCTAGTTTT
JMSF038G16- GCCATCCCACTTACAAGAACCAGAAATCTGCAGACTCAAGAATATGAAGAACCTAGTTTT
rJMSF038G16+ GCCATCCCACTTACAAGAACCAGAAATCTGCAGACTCAAGAATATGAAGAACCTAGTTTT
____________________________________________________________
consensus GCCATCCCACTTACAAGAACCAGAAATCTGCAGACTCAAGAATATGAAGAACCTAGTTTT
. : . : . : . : . : . :
JMSF009L21- ACCCACAAGGGAAAGATGATGATGGTGATGAGAAGGATGGATGTTGAGGTGAATGATTAT
rJMSF009L21+ ACCCACAAGGGAAAGATGATGATGGTGATGAGAAGGATGGATGTTGAGGTGAATGATTAT
JMSF038G16- ACCCACAAGGGAAAGATGATGATGGTGATGAGAAGGATGGATGTTGAGGTGAATGATTAT
JMFF051I17- AGGGAAAGATGATGATGGTGATGAGAAGGATGGATGTTGAGGTGAATGATTAT
rJMSF038G16+ ACCCACAAGGGAAAGATGATGATGGTGATGAGAAGGATGGATGTTGAGGTGAATGATTAT
rJMSF051H10+ AGGGAAAGATGATGATGGTGATGAGAAGGATGGATGTTGAGGTGAATGATTAT
____________________________________________________________
consensus ACCCACAAGGGAAAGATGATGATGGTGATGAGAAGGATGGATGTTGAGGTGAATGATTAT
. : . : . : . : . : . :
JMSF009L21- CCTGGTTCTGGGGCTAATCATCGCCACACGCCA
rJMSF009L21+ CCTGGTTCTGGGGCTAATCATCGCCACACGCCATGGGTACCACCAGCAAGAGCCTGCCTT
JMSF038G16- CCTGGTTCTGGGGCTAATCATCGCCACACGCCATGGGTACCACCAGCAAGAGCCTGCCTT
JMFF051I17- CCTGGTTCTGGGGCTAATCATCGCCACACGCCATGGGTACCACCAGCAAGAGCCTGCCTT
rJMSF038G16+ CCTGGTTCTGGGGCTAATCATCGCCACACGCCATGGGTACCACCAGCAAGAGCCTGCCTT
rJMSF051H10+ CCTGGTTCTGGGGCTAATCATCGCCACACGCCATGGGTACCACCAGCAAGAGCCTGCCTT
____________________________________________________________
consensus CCTGGTTCTGGGGCTAATCATCGCCACACGCCATGGGTACCACCAGCAAGAGCCTGCCTT
. : . : . : . : . : . :
rJMSF009L21+ GACTGCTAATTTGTGGCTGTCTGATCTTATGATGCATGCACAATTATAATGTGGATTATA
JMSF038G16- GACTGCTAATTTGTGGCTGTCTGATCTTATGATGCATGCACAATTATAATGTGGATTATA
JMFF051I17- GACTGCTAATTTGTGGCTGTCTGATCTTATGATGCATGCACAATTATAATGTGGATTATA
rJMSF038G16+ GACTGCTAATTTGTGGCTGTCTGATCTTATGATGCATGCACAATTATAATGTGGATTATA
rJMSF051H10+ GACTGCTAATTTGTGGCTGTCTGATCTTATGATGCATGCACAATTATAATGTGGATTATA
____________________________________________________________
consensus GACTGCTAATTTGTGGCTGTCTGATCTTATGATGCATGCACAATTATAATGTGGATTATA
. : . : . : . : . : . :
rJMSF009L21+ TGATAATCATCCATCCACTAGTTAGTTTCTTATTCTTATGTGGGTTTTGTATTCTATACA
JMSF038G16- TGATAATCATCCATCCACTAGTTAGTTTCTTATTCTTATGTGGGTTTTGTATTCTATACA
JMFF051I17- TGATAATCATCCATCCACTAGTTAGTTTCTTATTCTTATGTGGGTTTTGTATTCTATACA
rJMSF038G16+ TGATAATCATCCATCCACTAGTTAGTTTCTTATTCTTATGTGGGTTTTGTATTCTATACA
rJMSF051H10+ TGATAATCATCCATCCACTAGTTAGTTTCTTATTCTTATGTGGGTTTTGTATTCTATACA
____________________________________________________________
consensus TGATAATCATCCATCCACTAGTTAGTTTCTTATTCTTATGTGGGTTTTGTATTCTATACA
. : . : . : . : . : . :
rJMSF009L21+ ACATATTTTCTTTGTTGTATAATATCATACATTATGAATGTAAAGGGGAAAATTGGTATA
JMSF038G16- ACATATTTTCTTTGTTGTATAATATCATACATTATGAATGTAAAGGGGAAAATTGGTATA
JMFF051I17- ACATATTTTCTTTGTTGTATAATATCATACATTATGAATGTAAAGGGGAAAATTG
rJMSF038G16+ ACATATTTTCTTTGTTGTATAATATCATACATTATGAATGTAAAGGGGAAAATTGGTATA
rJMSF051H10+ ACATATTTTCTTTGTTGTATAATATCATACATTATGAATGTAAAGGGGAAAATTGGTATA
____________________________________________________________
consensus ACATATTTTCTTTGTTGTATAATATCATACATTATGAATGTAAAGGGGAAAATTGGTATA
. : . : . : . : . : . :
rJMSF009L21+ TTAAAATATCGCAAATCATTACTAGTTAGTTCAGCACTTCAGCTATTTTGTAAACTCTTC
JMSF038G16- TTAAAATATCGCAAATCATTACTAGTTAGTTCAGCACTTCAGCTATTTTGTAAACTCTTC
rJMSF038G16+ TTAAAATATCGCAAATCATTACTAGTTAGTTCAGCACTTCAGCTATTTTGTAAACTCTTC
rJMSF051H10+ TTAAAATATCGCAAATCATTACTAGTTAGTTCAGCACTTCAGCTATTTTGTAAACTCTTC
____________________________________________________________
consensus TTAAAATATCGCAAATCATTACTAGTTAGTTCAGCACTTCAGCTATTTTGTAAACTCTTC
. : . : . : . : . : . :
rJMSF009L21+ GTAATGATGAGTTATGTGCTCTAAGACAAAGAACTGTGAGCAAATAGCGT
JMSF038G16- GTAATGATGAGTTATGTGCTCTAAGACAAAGAACTGTGAGCAAATAGCGTTGTTCGGTTT
rJMSF038G16+ GTAATGATGAGTTATGTGCTCTAAGACAAAGAACTGTGAGCAAATAGCGTTGTTCGGTTT
rJMSF051H10+ GTAATGATGAGTTATGTGCTCTAAGACAAAGAACTGTGAGCAAATAGCGTTGTTCGGTTT
____________________________________________________________
consensus GTAATGATGAGTTATGTGCTCTAAGACAAAGAACTGTGAGCAAATAGCGTTGTTCGGTTT
. : . : . : . : . : . :
JMSF038G16- CTGAAATGTATGTTGCTTTCGTTGGTTTAGAAAGTAATTCAGTATTAGATGCGAGTAAGC
rJMSF038G16+ CTGAAATGTATGTTGCTTTCGTTGGTTTAGAAAGTAATTCAGTATTAGATGCGAGTAAGC
rJMSF051H10+ CTGAAATGTATGTTGCTTTCGTTGGTTTAGAAAGTAATTCAGTATTAGATGCGAGTAAGC
____________________________________________________________
consensus CTGAAATGTATGTTGCTTTCGTTGGTTTAGAAAGTAATTCAGTATTAGATGCGAGTAAGC
. : . : . : . : . : . :
JMSF038G16- C
rJMSF038G16+ CAAGTAGAAGCTAATTTGCAATATAATGTTGTAAATGAAAGCATGGTTTATGCCTA
rJMSF051H10+ CAAGTAGAAGCTAATTTGCAATATAATGTTGTAAATGAAAGCATGGTTTATGCCTAGCTT
____________________________________________________________
consensus CAAGTAGAAGCTAATTTGCAATATAATGTTGTAAATGAAAGCATGGTTTATGCCTAGCTT