| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF004G14 | Sequence | 436 | 013376 (5) | ref|XP_009769939.1| | 5e-35 | PREDICTED: non-specific phospholipase C1 [Nicotiana sylvestris] | 570 | 007252 (4) | dbj|BAD26587.1| | 4e-50 | phospholipase [Citrullus lanatus] |
| JMSF004G16 | Sequence | 436 | 002933 (9) | ref|XP_009596714.1| | 8e-18 | PREDICTED: protein TIFY 10A-like isoform X2 [Nicotiana tomentosiformis] | 211 | 007252 (4) | gb|EMS45693.1| | 1e-17 | Phospholipase C 3 [Triticum urartu] |
| JMSF024P13 | Sequence | 664 | 013376 (5) | ref|XP_009611204.1| | 5e-51 | PREDICTED: non-specific phospholipase C1 isoform X2 [Nicotiana tomentosiformis] | 731 | 007252 (4) | gb|AFW67100.1| | 1e-91 | hypothetical protein ZEAMMB73_724533 [Zea mays] |
| JMSF051D03 | Sequence | 683 | 013376 (5) | ref|XP_009611204.1| | 9e-101 | PREDICTED: non-specific phospholipase C1 isoform X2 [Nicotiana tomentosiformis] | 756 | 007252 (4) | gb|AFW67100.1| | 2e-91 | hypothetical protein ZEAMMB73_724533 [Zea mays] |
This contig is upended
. : . : . : . : . : . :
rJMSF024P13+ TTCTCCATGGATTGACAAGGCCACTGTGATCCATGA
rJMSF051D03+ TTCTCCATGGATTGACAAGGCCACTGTGATCCATGA
____________________________________________________________
consensus TTCTCCATGGATTGACAAGGCCACTGTGATCCATGA
. : . : . : . : . : . :
rJMSF024P13+ ACCTAATGGTCCACAGTCATCTTCACAATTTGAACATTCTTCAATACCAGCAACAGTTAA
rJMSF051D03+ ACCTAATGGTCCACAGTCATCTTCACAATTTGAACATTCTTCAATACCAGCAACAGTTAA
____________________________________________________________
consensus ACCTAATGGTCCACAGTCATCTTCACAATTTGAACATTCTTCAATACCAGCAACAGTTAA
. : . : . : . : . : . :
rJMSF024P13+ GCGGCTTTTTAATCTGGAATCAAGCTTCTTGACCAAAAGGGACGCGTGGGCTGGAAGCTT
rJMSF051D03+ GCGGCTTTTTAATCTGGAATCAAGCTTCTTGACCAAAAGGGACGCGTGGGCTGGAAGCTT
____________________________________________________________
consensus GCGGCTTTTTAATCTGGAATCAAGCTTCTTGACCAAAAGGGACGCGTGGGCTGGAAGCTT
. : . : . : . : . : . :
rJMSF024P13+ TGACAGCTACTTTCATCTGCGCCAGACTCCCCGTGATGATTGTCCAGAAACACTCCCGGA
rJMSF004G14+ CTCCCCGTGATGATTGTCCAGAAACACTCCCGGA
rJMSF051D03+ TGACAGCTACTTTCATCTGCGCCAGACTCCCCGTGATGATTGTCCAGAAACACTCCCGGA
____________________________________________________________
consensus TGACAGCTACTTTCATCTGCGCCAGACTCCCCGTGATGATTGTCCAGAAACACTCCCGGA
. : . : . : . : . : . :
rJMSF024P13+ GGTGACAAAATCATTGAGGCCACGGGGACCTCAAGAAGACGCCAAACTCTCTGAATTCCA
rJMSF004G14+ GGTGACAAAATCATTGAGGCCACGGGGACCTCAAGAAGACGCCAAACTCTCTGAATTCCA
rJMSF051D03+ GGTGACAAAATCATTGAGGCCACGGGGACCTCAAGAAGACGCCAAACTCTCTGAATTCCA
____________________________________________________________
consensus GGTGACAAAATCATTGAGGCCACGGGGACCTCAAGAAGACGCCAAACTCTCTGAATTCCA
. : . : . : . : . : . :
rJMSF004G16+ TATCC
rJMSF024P13+ ACTCGAGCTGATCCAGCTTGCATCTCAGCTTTGTGGCGATCACGTTCTAAATACTTATCC
rJMSF004G14+ ACTCGAGCTGATCCAGCNTGCATCTCAGCTTNGTGGCGATCACGTTNTAAATACTTATCC
rJMSF051D03+ ACTCGAGCTGATCCAGCTTGCATCTCAGCTTTGTGGCGATCACGTTCTAAATACTTATCC
____________________________________________________________
consensus ACTCGAGCTGATCCAGCTTGCATCTCAGCTTTGTGGCGATCACGTTCTAAATACTTATCC
. : . : . : . : . : . :
rJMSF004G16+ TGACATCGGGAAGGACATGAACATTGGGGAAGCCAACCGATACGTAGNGGATGCAGTCGA
rJMSF024P13+ TGACATCGGGAAGGACATGAACGTTGGGGAAGCCAACCGATACGTAGAGGATGCAGTCGA
rJMSF004G14+ TGACATCGGGAAGGACATGAACATTGGGGAAGCCAACCGATACGTAGAGGATGCAGTCGA
rJMSF051D03+ TGACATCGGGAAGGACATGAACGTTGGGGAAGCCAACCGATACGTAGAGGATGCAGTCGA
____________________________________________________________
consensus TGACATCGGGAAGGACATGAACGTTGGGGAAGCCAACCGATACGTAGAGGATGCAGTCGA
. : . : . : . : . : . :
rJMSF004G16+ GAGGTTNTTGGAGGCTGGAAGGGNNGCCNTAATAGNCGGAGCAAATGAATCANCAATTGT
rJMSF024P13+ GAGGTTCTTGGAGGCTGGAAGGGCTGCCTTAATAGCCGGAGCAAATGAATCAGCAATTGT
rJMSF004G14+ GAGGTTCTTGGAGGCTGGAAGGGCTGCCTTAATAGCCGGAGCAAATGAATCAGCAATTGT
rJMSF051D03+ GAGGTTCTTGGAGGCTGGAAGGGCTGCCTTAATAGCCGGAGCAAATGAATCAGCAATTGT
____________________________________________________________
consensus GAGGTTCTTGGAGGCTGGAAGGGCTGCCTTAATAGCCGGAGCAAATGAATCAGCAATTGT
. : . : . : . : . : . :
rJMSF004G16+ NACAATGAGACCAGCTCTGACTAGTCGAACATCAGTGGGATNGGGANCTGCCAGTNCTTN
rJMSF024P13+ CACAATGAGACCAGCTCTGACTAGTCGAACATCAGTGGGACTGGGAACTGCCAGTGCTTA
rJMSF004G14+ CACAATGAGACCAGCTCTGANTAGTCGAACATCAGTGGGACTGGGAACTGCCAGTGCTTA
rJMSF051D03+ CACAATGAGACCAGCTCTGACTAGTCGAACATCAGTGGGACTGGGAACTGCCAGTGCTTA
____________________________________________________________
consensus CACAATGAGACCAGCTCTGACTAGTCGAACATCAGTGGGACTGGGAACTGCCAGTGCTTA
. : . : . : . : . : . :
rJMSF004G16+ ACATCATTNTAGNTTATCCAGTTA
rJMSF024P13+ ACATCATTCTAGTTTATCCAGTTATTGTACGTACATACCTTCTGCAATGTGGGCACACGT
rJMSF004G14+ ACATCATTNTAGTTTATCCAGTTATTGTACGTACATACCTTCTGCAATGTGGGCACACGT
rJMSF051D03+ ACATCATTCTAGTTTATCCAGTTATTGTACGTACATACCTTCTGCAATGTGGGCACACGT
____________________________________________________________
consensus ACATCATTCTAGTTTATCCAGTTATTGTACGTACATACCTTCTGCAATGTGGGCACACGT
. : . : . : . : . : . :
rJMSF024P13+ GGTGTTGGAAGTCATCAACTCTCCTCAATGCATGTAAATAGTCGCTCAGAACCATTTCAA
rJMSF004G14+ GGTGTTGGAAGTCATCAACTCTCCTCAANGCATGTAAATAGTCGCTCAGAACCATTTCAA
rJMSF051D03+ GGTGTTGGAAGTCATCAACTCTCCTCAATGCATGTAAATAGTCGCTCAGAACCATTTCAA
____________________________________________________________
consensus GGTGTTGGAAGTCATCAACTCTCCTCAATGCATGTAAATAGTCGCTCAGAACCATTTCAA
. : . : . : . : . : . :
rJMSF024P13+ TTGTCTCTATATTTGTATCCTGCTATATATCTCTATATGTATAAATTATTTTAGATACTG
rJMSF004G14+ TTGTCTCTATATTTGTATCCTGCTATATATCTCTATATGNATAAATTATTTTAGATACTG
rJMSF051D03+ TTGTCTCTATATTTGTATCCTGCTATATATCTCTATATGTATAAATTATTTTAGATACTG
____________________________________________________________
consensus TTGTCTCTATATTTGTATCCTGCTATATATCTCTATATGTATAAATTATTTTAGATACTG
. : . : . : . : . : . :
rJMSF024P13+ TTCGAATCAAATTGTGATCATTCCTATGTATAATC
rJMSF004G14+ TTCGAATCAAATTGTGATCATTCCTATGTATAATCATTTGAATCTTAGAAGTCAAA
rJMSF051D03+ TTCGAATCAAATTGTGATCATTCCTATGTATAATCATTTGAATCTTAGAAGTCAAACATT
____________________________________________________________
consensus TTCGAATCAAATTGTGATCATTCCTATGTATAATCATTTGAATCTTAGAAGTCAAACATT