Contig 007243:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF050E22Sequence681007243 (2)ref|XP_009613964.1|3e-97PREDICTED: chorismate mutase 1, chloroplastic-like isoform X2 [Nicotiana toment748007243 (2)gb|ACI41889.1|8e-96chorismate mutase 1 [Petunia x hybrida]

Alignment

This contig is upended


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JMSF050E22-           GAATGGAGGCAAAGCTGCTTAGGGCCACCGCCTTTACCGTTCAAACCCATAATATCTCCC
                      ____________________________________________________________
consensus             GAATGGAGGCAAAGCTGCTTAGGGCCACCGCCTTTACCGTTCAAACCCATAATATCTCCC
 
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JMSF050E22-           GCTCTTCCAGGCTCACCACCCTCGCCTCTCACCATAGATGCCGTAAAGATTGCAGCTTTC
                      ____________________________________________________________
consensus             GCTCTTCCAGGCTCACCACCCTCGCCTCTCACCATAGATGCCGTAAAGATTGCAGCTTTC
 
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JMSF050E22-           GATTCCCCAATTCCAAGGGATTAAAGAATCGCATTCGCTCTGTCCAAGCCGTTGCTACTT
                      ____________________________________________________________
consensus             GATTCCCCAATTCCAAGGGATTAAAGAATCGCATTCGCTCTGTCCAAGCCGTTGCTACTT
 
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JMSF050E22-           CTCCCGGAATGGGAAAGAAAAGTAGAGTGGATGAGACAGAGAGTTATACTCTAGATGGTA
                      ____________________________________________________________
consensus             CTCCCGGAATGGGAAAGAAAAGTAGAGTGGATGAGACAGAGAGTTATACTCTAGATGGTA
 
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JMSF050E22-           TAAGAAGTTCCTTAATTCGGCAAGAGGATAGTATTATATTTAGCCTTGTGGAGAGAGCTC
                      ____________________________________________________________
consensus             TAAGAAGTTCCTTAATTCGGCAAGAGGATAGTATTATATTTAGCCTTGTGGAGAGAGCTC
 
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JMSF050E22-           AGTATTGTTACAACCCTGACACGTATAATCCTGACGCTTTTCCAATGGAAGCTTTCCACG
                      ____________________________________________________________
consensus             AGTATTGTTACAACCCTGACACGTATAATCCTGACGCTTTTCCAATGGAAGCTTTCCACG
 
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JMSF050E22-           GCTCATTGATTGAGTACATTCTTAAAGAAACTGAGAAGCTTCATGCTAAGGTTGGAAGGT
rJMSF050E22+                                          GAGAAGCTTCATGCTAAGGNTGGAAGGT
                      ____________________________________________________________
consensus             GCTCATTGATTGAGTACATTCTTAAAGAAACTGAGAAGCTTCATGCTAAGGTTGGAAGGT
 
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JMSF050E22-           ATAATAGCCCTGATGAGCATCCTTTCTTCCCAGATGAAGTGCCTCAA-CCCATGTTGCCA
rJMSF050E22+          ATAATAGCCCTGATGAGCATCCTTTCTTCCCAGATGAAGTGCCTCAACCCCATGTTGCCA
                      ____________________________________________________________
consensus             ATAATAGCCCTGATGAGCATCCTTTCTTCCCAGATGAAGTGCCTCAACCCCATGTTGCCA
 
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JMSF050E22-           CCCCTTCAATACCCACAGGTTCTGCATCCAGTTGCTACTTCAATTAATATCAACATCAAA
rJMSF050E22+          CCCCTTCAATACCCACAGGTTCTGCATCCAGTTGCTACTTCAATTAATATCAACATCAAA
                      ____________________________________________________________
consensus             CCCCTTCAATACCCACAGGTTCTGCATCCAGTTGCTACTTCAATTAATATCAACATCAAA
 
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JMSF050E22-           ATATGGGATATGTACTTCAAAAATCTTCTTCCTAGGTTAGTGAAAGAAGGCGATGACGGT
rJMSF050E22+          ATATGGGATATGTACTTCAAAAATCTTCTTCCTAGGTTAGTGAAAGAAGGCGATGACGGT
                      ____________________________________________________________
consensus             ATATGGGATATGTACTTCAAAAATCTTCTTCCTAGGTTAGTGAAAGAAGGCGATGACGGT
 
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JMSF050E22-           AATTGTGGAGCAACTGCAGTTTGTGACACTCTTTGCCTGCAGGCGCTCTCGAAGAGAATT
rJMSF050E22+          AATTGTGGAGCAACTGCAGTTTGTGACACTCTTTGCCTGCAGGCGCTCTCGAAGAGAATT
                      ____________________________________________________________
consensus             AATTGTGGAGCAACTGCAGTTTGTGACACTCTTTGCCTGCAGGCGCTCTCGAAGAGAATT
 
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JMSF050E22-           CATTATGGGAAA                                                
rJMSF050E22+          CATTATGGGAAATTTGTAGCAGAAGCAAAATATCAGGCATCACCAGAAGTCTATAAAGCT
                      ____________________________________________________________
consensus             CATTATGGGAAATTTGTAGCAGAAGCAAAATATCAGGCATCACCAGAAGTCTATAAAGCT
 
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rJMSF050E22+          GCTATTGTAGCACAAGACAAAAACAAACTGATGGAACTGCTGACATATCCTACGGTCGAA
                      ____________________________________________________________
consensus             GCTATTGTAGCACAAGACAAAAACAAACTGATGGAACTGCTGACATATCCTACGGTCGAA
 
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rJMSF050E22+          GAGGCAATCAAAAATCGGGTAGAGGTGAAAACGAGAACTTATGGGCAAGAGGTGACCATC
                      ____________________________________________________________
consensus             GAGGCAATCAAAAATCGGGTAGAGGTGAAAACGAGAACTTATGGGCAAGAGGTGACCATC
 
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rJMSF050E22+          AATGAAGGGGGAAGTAAAAGCGATCCGGTATACAAGATAAACCCAAGCCTAGTTGCTGAA
                      ____________________________________________________________
consensus             AATGAAGGGGGAAGTAAAAGCGATCCGGTATACAAGATAAACCCAAGCCTAGTTGCTGAA
 
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rJMSF050E22+          CTATACGGGGATTGGATCATGCCATTGACCAAGGAAGTCCAGGTTCAATACCTATTAAGA
                      ____________________________________________________________
consensus             CTATACGGGGATTGGATCATGCCATTGACCAAGGAAGTCCAGGTTCAATACCTATTAAGA
 
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rJMSF050E22+          AGACTCGATTAATCAAATGTAAATGTTCATTGCCACTAGTTCCATTGTTGAACTTACAGT
                      ____________________________________________________________
consensus             AGACTCGATTAATCAAATGTAAATGTTCATTGCCACTAGTTCCATTGTTGAACTTACAGT
 
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rJMSF050E22+          AGTTGATGCTATCAGGTATGTATTCATAGAGGTATTTAGTTTCCCATATAATACCATTGT
                      ____________________________________________________________
consensus             AGTTGATGCTATCAGGTATGTATTCATAGAGGTATTTAGTTTCCCATATAATACCATTGT
 
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rJMSF050E22+          TTGTGGTTTTGAAATATGGCACTGCTTACTTGTAAACCTGACCTTCAAATACCAATGTGT
                      ____________________________________________________________
consensus             TTGTGGTTTTGAAATATGGCACTGCTTACTTGTAAACCTGACCTTCAAATACCAATGTGT