Contig 007240:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF009H02Sequence391000993 (5)758007240 (4)ref|XP_011079495.1|1e-82PREDICTED: uncharacterized protein LOC105163000 isoform X1 [Sesamum indicum]
JMSF030B15Sequence712000993 (5)ref|XP_009773072.1|2e-20PREDICTED: uncharacterized protein LOC104223345 isoform X2 [Nicotiana sylvestri757007240 (4)ref|XP_011079495.1|5e-83PREDICTED: uncharacterized protein LOC105163000 isoform X1 [Sesamum indicum]
JMSF039H02Sequence665000993 (5)gb|ABN08058.1|7e-07RNA-directed DNA polymerase , related [Medicago truncatula]801007240 (4)ref|XP_011079495.1|5e-52PREDICTED: uncharacterized protein LOC105163000 isoform X1 [Sesamum indicum]
JMSF049O12Sequence666000993 (5)gb|ABN08058.1|7e-07RNA-directed DNA polymerase , related [Medicago truncatula]718007240 (4)ref|XP_011079495.1|2e-52PREDICTED: uncharacterized protein LOC105163000 isoform X1 [Sesamum indicum]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF039H02+ CTTAGAGCATTATAGCCCGTCAGGGATCGATCATTAGCC
                      ____________________________________________________________
consensus CTTAGAGCATTATAGCCCGTCAGGGATCGATCATTAGCC
 
. : . : . : . : . : . :
rJMSF039H02+ TGGAGCAGCCTAAAATCTCTTAGCCAGCTGAGCTGTCACACCCTTTATAGGTGTCTACAA
                      ____________________________________________________________
consensus TGGAGCAGCCTAAAATCTCTTAGCCAGCTGAGCTGTCACACCCTTTATAGGTGTCTACAA
 
. : . : . : . : . : . :
rJMSF039H02+ TTCTGCGAGGGGATTAGTCACTGTGTCTATGGTGGATACCCGAGTTACACCCAAAAAAAT
                      ____________________________________________________________
consensus TTCTGCGAGGGGATTAGTCACTGTGTCTATGGTGGATACCCGAGTTACACCCAAAAAAAT
 
. : . : . : . : . : . :
rJMSF039H02+ TACTGGGAAGGATTTGATGCCTTCTGGAGTACTTGTCCATACTGTTCTCGAGAGTAATCA
                      ____________________________________________________________
consensus TACTGGGAAGGATTTGATGCCTTCTGGAGTACTTGTCCATACTGTTCTCGAGAGTAATCA
 
. : . : . : . : . : . :
rJMSF009H02+ GCTAATTGGAT
rJMSF039H02+ CATTTCTGCAATTCTAATCATTTGCTATTTCTTTTAAATAATTTTGGCAGCTAATTGGAT
rJMSF030B15+ GCTAATTGGAT
rJMSF049O12+ GCTAATTGGAT
                      ____________________________________________________________
consensus CATTTCTGCAATTCTAATCATTTGCTATTTCTTTTAAATAATTTTGGCAGCTAATTGGAT
 
. : . : . : . : . : . :
rJMSF009H02+ GTATGCACTCTGTAAATGCCATTTTCCTTTTCCTTGATTCTGCTCTAAATAAGCTTCCAT
rJMSF039H02+ GTATGCACTCTGTAAATGCCATTTTCCTTTTCCTTGATTCTGCTCTAAATAAGCTTCCAT
rJMSF030B15+ GTATGCACTCTGTAAATGCCATTTTCCTTTTCCTTGATTCTGCTCTAAATAAGCTTCCAT
rJMSF049O12+ GTATGCACTCTGTAAATGCCATTTTCCTTTTCCTTGATTCTGCTCTAAATAAGCTTCCAT
                      ____________________________________________________________
consensus GTATGCACTCTGTAAATGCCATTTTCCTTTTCCTTGATTCTGCTCTAAATAAGCTTCCAT
 
. : . : . : . : . : . :
rJMSF009H02+ TTTCATGGTACGGCTTCGTATACTTTATTCTATGGGGTTGTGCTTATGTTGCTTTCCAGT
rJMSF039H02+ TTTCATGGTACGGCTTCGTATACTTTATTCTATGGGGTTGTGCTTATGTTGCTTTCCAGT
rJMSF030B15+ TTTCATGGTACGGCTTCGTATACTTTATTCTATGGGGTTGTGCTTATGTTGCTTTCCAGT
rJMSF049O12+ TTTCATGGTACGGCTTCGTATACTTTATTCTATGGGGTTGTGCTTATGTTGCTTTCCAGT
                      ____________________________________________________________
consensus TTTCATGGTACGGCTTCGTATACTTTATTCTATGGGGTTGTGCTTATGTTGCTTTCCAGT
 
. : . : . : . : . : . :
rJMSF009H02+ GGATTCTCCACGCGTGCTGCTATACATGGTGGCCATATCCTTTCCTTGACCTTTCAACTC
rJMSF039H02+ GGATTCTCCACGCGTGCTGCTATACATGGTGGCCATATCCTTTCCTTGACCTTTCAACTC
rJMSF030B15+ GGATTCTCCACGCGTGCTGCTATACATGGTGGCCATATCCTTTCCTTGACCTTTCAACTC
rJMSF049O12+ GGATTCTCCACGCGTGCTGCTATACATGGTGGCCATATCCTTTCCTTGACCTTTCAACTC
                      ____________________________________________________________
consensus GGATTCTCCACGCGTGCTGCTATACATGGTGGCCATATCCTTTCCTTGACCTTTCAACTC
 
. : . : . : . : . : . :
rJMSF009H02+ CATGGGCACCTTTATGGTATTTTGCACTGGCCTTGGTTCACGTCCCCTGCTATGGAATAT
rJMSF039H02+ CATGGGCACCTTTATGGTATTTTGCACTGGCCTTGGTTCACGTCCCCTGCTATGGAATAT
rJMSF030B15+ CATGGGCACCTTTATGGTATTTTGCACTGGCCTTGGTTCACGTCCCCTGCTATGGAATAT
rJMSF049O12+ CATGGGCACCTTTATGGTATTTTGCACTGGCCTTGGTTCACGTCCCCTGCTATGGAATAT
                      ____________________________________________________________
consensus CATGGGCACCTTTATGGTATTTTGCACTGGCCTTGGTTCACGTCCCCTGCTATGGAATAT
 
. : . : . : . : . : . :
rJMSF009H02+ ACGTTCTGCTCATAAAATTAAAAGACGGAATCTTGTCAAGGATGTTTGCTGAGGCTTATG
rJMSF039H02+ ACGTTCTGCTCATAAAATTAAAAGACGGAATCTTGTCAAGGATGTTTGCTGAGGCTTATG
rJMSF030B15+ ACGTTCTGCTCATAAAATTAAAAGACGGAATCTTGTCAAGGATGTTTGCTGAGGCTTATG
rJMSF049O12+ ACGTTCTGCTCATAAAATTAAAAGACGGAATCTTGTCAAGGATGTTTGCTGAGGCTTATG
                      ____________________________________________________________
consensus ACGTTCTGCTCATAAAATTAAAAGACGGAATCTTGTCAAGGATGTTTGCTGAGGCTTATG
 
. : . : . : . : . : . :
rJMSF009H02+ TTAGGGTTACAATGGAGAAGAAGGGAACTTGACACAGAAGAAATCTGTTTCCAGAAAGAA
rJMSF039H02+ TTAGGGTTACAATGGAGAAGAAGGGAACTTGACACAGAAGAAATCTGTTTCCAGAAAGAA
rJMSF030B15+ TTAGGGTTACAATGGAGAAGAAGGGAACTTGACACAGAAGAAATCTGTTTCCAGAAAGAA
rJMSF049O12+ TTAGGGTTACAATGGAGAAGAAGGGAACTTGACACAGAAGAAATCTGTTTCCAGAAAGAA
                      ____________________________________________________________
consensus TTAGGGTTACAATGGAGAAGAAGGGAACTTGACACAGAAGAAATCTGTTTCCAGAAAGAA
 
. : . : . : . : . : . :
rJMSF009H02+ AAGAGTGGATCCTATCTACTTGCATATAAGAAAAGAAGATAGATTTAGACATTGGTACCT
rJMSF039H02+ AAGAGTGGATCCTATCTACTTGCATATAAGAAAAGAAGATAGATTTAGACATTGGTACCT
rJMSF030B15+ AAGAGTGGATCCTATCTACTTGCATATAAGAAAAGAAGATAGATTTAGACATTGGTACCT
rJMSF049O12+ AAGAGTGGATCCTATCTACTTGCATATAAGAAAAGAAGATAGATTTAGACATTGGTACCT
                      ____________________________________________________________
consensus AAGAGTGGATCCTATCTACTTGCATATAAGAAAAGAAGATAGATTTAGACATTGGTACCT
 
. : . : . : . : . : . :
rJMSF009H02+ ATCAATATCTGCATCTTATGCATGTGCTCTAGGCCTCTAGCTACTAGTTCCTGCTGTACA
rJMSF039H02+ ATCAATATCTGCATCTTATGCATGTGCTCTAGGCCTCTAGCTACTAGTTCCTGCTGTACA
rJMSF030B15+ ATCAATATCTGCATCTTATGCATGTGCTCTAGGCCTCTAGCTACTAGTTCCTGCTGTACA
rJMSF049O12+ ATCAATATCTGCATCTTATGCATGTGCTCTAGGCCTCTAGCTACTAGTTCCTGCTGTACA
                      ____________________________________________________________
consensus ATCAATATCTGCATCTTATGCATGTGCTCTAGGCCTCTAGCTACTAGTTCCTGCTGTACA
 
. : . : . : . : . : . :
rJMSF009H02+ CTCTGTAGGAAATTGTTCATTTTAGTGTATGCATTATTAAT
rJMSF039H02+ CTCTGTAGAAAATTGTTCATTTTAGTGTATGCATTATTAAT
rJMSF030B15+ CTCTGTAGAAAATTGTTCATTTTAGTGTATGCATTATTAAT
rJMSF049O12+ CTCTGTAGAAAATTGTTCATTTTAGTGTATGCATTATTAATTTAATCCTGAATGTAAAGA
                      ____________________________________________________________
consensus CTCTGTAGAAAATTGTTCATTTTAGTGTATGCATTATTAATTTAATCCTGAATGTAAAGA