Contig 007239:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF014F11Sequence508003896 (2)ref|XP_009778400.1|2e-46PREDICTED: cyprosin-like isoform X1 [Nicotiana sylvestris]806007239 (2)ref|XP_009616098.1|1e-78PREDICTED: cyprosin-like [Nicotiana tomentosiformis]
JMSF049K24Sequence693003896 (2)ref|XP_009778402.1|7e-44PREDICTED: cyprosin-like isoform X2 [Nicotiana sylvestris] ref|XP_009778403.1| P707007239 (2)ref|XP_009616098.1|1e-66PREDICTED: cyprosin-like [Nicotiana tomentosiformis]

Alignment

This contig is upended


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rJMSF014F11+                                            TCAAATTAACCATGCCATTGGGCAGA
                      ____________________________________________________________
consensus                                               TCAAATTAACCATGCCATTGGGCAGA
 
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rJMSF014F11+          TGGAATAGTGAGCTGGGAGTGTAAACACGTTGTCTCAAAGTATGGAGATTTAATATGGGA
                      ____________________________________________________________
consensus             TGGAATAGTGAGCTGGGAGTGTAAACACGTTGTCTCAAAGTATGGAGATTTAATATGGGA
 
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rJMSF014F11+          ACTCATAATCTTAGGGTTCCAACCTGATTCGGTGTGTTACAGAATCGGGCTTTGCTTCTA
rJMSF049K24+                       GGGTTCCAACCTGATTCGGTGTGTTACAGAATCGGGCTTTGCTTCTA
                      ____________________________________________________________
consensus             ACTCATAATCTTAGGGTTCCAACCTGATTCGGTGTGTTACAGAATCGGGCTTTGCTTCTA
 
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rJMSF014F11+          TAATCAGAGTGACGACGGTGTAAGCGGAGGTCCTGAAATGGTACGCAAAAGTTTAAAGCT
rJMSF049K24+          TAATCAGAGTGACGACGGTGTAAGCGGAGGTCCTGAAATGGTACGCAAAAGTTTAAAGCT
                      ____________________________________________________________
consensus             TAATCAGAGTGACGACGGTGTAAGCGGAGGTCCTGAAATGGTACGCAAAAGTTTAAAGCT
 
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rJMSF014F11+          GAAGTCTTCTTCAGGAGACGAGAGAGCTTTGTGTACGTTCTGTGAGATGACGGTTTTCTG
rJMSF049K24+          GAAGTCTTCTTCAGGAGACGAGAGAGCTTTGTGTACGTTCTGTGAGATGACGGTTTTCTG
                      ____________________________________________________________
consensus             GAAGTCTTCTTCAGGAGACGAGAGAGCTTTGTGTACGTTCTGTGAGATGACGGTTTTCTG
 
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rJMSF014F11+          GATCAAAGTTGAGCTCAGGAAACAGAAAACCAAAGACAAAGTATTCAGTTATGTTGACGA
rJMSF049K24+          GATCAAAGTTGAGCTCAGGAAACAGAAAACCAAAGACAAAGTATTCAGTTATGTTGACGA
                      ____________________________________________________________
consensus             GATCAAAGTTGAGCTCAGGAAACAGAAAACCAAAGACAAAGTATTCAGTTATGTTGACGA
 
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rJMSF014F11+          GCTTTGTGAGAAGCTTCCGAATCCAAGAGGAAAGTCATTCATAAACTGCGACGATGTCTT
rJMSF049K24+          GCTTTGTGAGAAGCTTCCGAATCCAAGAGGAAAGTCATTCATAAACTGCGACGATGTCTT
                      ____________________________________________________________
consensus             GCTTTGTGAGAAGCTTCCGAATCCAAGAGGAAAGTCATTCATAAACTGCGACGATGTCTT
 
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rJMSF014F11+          TAAACTGCCACATATTTCAGTTACCATAGCCAACAAAACCTTCCCCCTCGCTCCACGTGA
rJMSF049K24+          TAAACTGCCACATATTTCAGTTACCATAGCCAACAAAACCTTCCCCCTCGCTCCACGTGA
                      ____________________________________________________________
consensus             TAAACTGCCACATATTTCAGTTACCATAGCCAACAAAACCTTCCCCCTCGCTCCACGTGA
 
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rJMSF014F11+          GTATGTGATCAGGATTCAAGAAAACCGAACCACTTTATGTGTTAGCGCATTCGCGCCTTT
rJMSF049K24+          GTATGTGATCAGGATTCAAGAAAACCGAACCACTTTATGTGTTAGCGCATTCGCGCCTTT
                      ____________________________________________________________
consensus             GTATGTGATCAGGATTCAAGAAAACCGAACCACTTTATGTGTTAGCGCATTCGCGCCTTT
 
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rJMSF014F11+          GGATGTGCCCCGTCCTCAAGGCCCTCTCTGGGTTCTGGGAGGGGCATTCTTGAGAGCATA
rJMSF049K24+          GGATGTGCCCCGTCCTCAAGGCCCTCTCTGGGTTCTGGGAGGGGCATTCTTGAGAGCATA
                      ____________________________________________________________
consensus             GGATGTGCCCCGTCCTCAAGGCCCTCTCTGGGTTCTGGGAGGGGCATTCTTGAGAGCATA
 
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rJMSF014F11+          CCACACTGTGTTCGACTTTGGGAAGATGCAAATCGGCTTTGCACAGACTGCATAGAATGA
rJMSF049K24+          CCACACTGTGTTCGACTTTGGGAAGATGCAAATCGGCTTTGCACAGACTGCATAGAATGA
                      ____________________________________________________________
consensus             CCACACTGTGTTCGACTTTGGGAAGATGCAAATCGGCTTTGCACAGACTGCATAGAATGA
 
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rJMSF014F11+          ACAGATCATCGATGTTTGGCAATGGATCGGAGTTTTAATTATTAATGCTTAAGATGTGCT
rJMSF049K24+          ACAGATCATCGATGTTTGGCAATGGATCGGAGTTTTAATTATTAATGCTTAAGATGTGCT
                      ____________________________________________________________
consensus             ACAGATCATCGATGTTTGGCAATGGATCGGAGTTTTAATTATTAATGCTTAAGATGTGCT
 
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rJMSF014F11+          TGTATAGGCGTATATAGAGTTGCATTATATTGCAACTATATTATATGACTTGTGGGAATA
rJMSF049K24+          TGTATAGGCGTATATAGAGTTGCATTATATTGCAACTATATTATATGACTTGTGGGAATA
                      ____________________________________________________________
consensus             TGTATAGGCGTATATAGAGTTGCATTATATTGCAACTATATTATATGACTTGTGGGAATA
 
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rJMSF014F11+          ATTGTGCTTATGAAAGAATAATCATGTATATAGGTTTTGCTCAGCATTTTGGCATCTACC
rJMSF049K24+          ATTGTGCTTATGAAAGAATAATCATGTATATAGGTTTTGCTCAGCATTTTGGCATCTACC
                      ____________________________________________________________
consensus             ATTGTGCTTATGAAAGAATAATCATGTATATAGGTTTTGCTCAGCATTTTGGCATCTACC