Contig 007236:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF045A23-                           GGATGAGTTGTATTCACAACGTTTTTCTCTGCGAAGAGTTGTAA
JMSF049H01-                                                                   GTAA
                      ____________________________________________________________
consensus                             GGATGAGTTGTATTCACAACGTTTTTCTCTGCGAAGAGTTGTAA
 
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JMSF045A23-           GCAGTGAGAGAGGTTCAGTGAAGTGCTGCGATGGCGGAGAAGCCTCAACCGGTTCAGGTC
JMSF049H01-           GCAGTGAGAGAGGTTCAGTGAAGTGCTGCGATGGCGGAGAAGCCTCAACCGGTTCAGGTC
                      ____________________________________________________________
consensus             GCAGTGAGAGAGGTTCAGTGAAGTGCTGCGATGGCGGAGAAGCCTCAACCGGTTCAGGTC
 
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JMSF045A23-           TTGTACTGCGGAGTATGCGGGTTACCCGCCGAGTATTGTGAGTTCGGACCGGACTTCGAG
JMSF049H01-           TTGTACTGCGGAGTATGCGGGTTACCCGCCGAGTATTGTGAGTTCGGACCGGACTTCGAG
                      ____________________________________________________________
consensus             TTGTACTGCGGAGTATGCGGGTTACCCGCCGAGTATTGTGAGTTCGGACCGGACTTCGAG
 
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JMSF045A23-           AAATGC-AACCCTGGTTGATCCAGAACGCGCCCGATCTCTACCCGGATCTCCTTAAAGGA
JMSF049H01-           AAATGCAAACCCTGGTTGATCCAGAACGCGCCCGATCTCTACCCGGATCTCCTTAAAGGA
                      ____________________________________________________________
consensus             AAATGCAAACCCTGGTTGATCCAGAACGCGCCCGATCTCTACCCGGATCTCCTTAAAGGA
 
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JMSF045A23-           GCCGGTGGAAAAGAAGCAGATAAAATATCTCATCAGCTCCAATCAACTTCAATCTCCGAT
JMSF049H01-           GCCGGTGGAAAAGAAGCAGATAAAATATCTCATCAGCTCCAATCAACTTCAATCTCCGAT
rJMSF045A23+                                               TCCAATCAACTTCAATCTCCGAT
                      ____________________________________________________________
consensus             GCCGGTGGAAAAGAAGCAGATAAAATATCTCATCAGCTCCAATCAACTTCAATCTCCGAT
 
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JMSF045A23-           GCTGGAGCAGGTTCTTCAGCTCCTAAGCAGGAAGAAGTGAAACGGCTTCCAGGTGGAAAG
JMSF049H01-           GCTGGAGCAGGTTCTTCAGCTCCTAAGCAGGAAGAAGTGAAACGGCTTCCAGGTGGAAAG
rJMSF045A23+          GCTGGAGCAGGTTCTTCAGCTCCTAAGCAGGAAGAAGTGAAACGGCTTCCAGGTGGAAAG
                      ____________________________________________________________
consensus             GCTGGAGCAGGTTCTTCAGCTCCTAAGCAGGAAGAAGTGAAACGGCTTCCAGGTGGAAAG
 
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JMSF045A23-           ATAAAAAAGAAAGAGAAGCAGGAAATTGTGATTGAAAAGATGACTCGCAACAAGCGAAAA
JMSF049H01-           ATAAAAAAGAAAGAGAAGCAGGAAATTGTGATTGAAAAGATGACTCGCAACAAGCGAAAA
rJMSF045A23+          ATAAAAAAGAAAGAGAAGCAGGAAATTGTGATTGAAAAGATGACTCGCAACAAGCGAAAA
rJMSF049H01+                                  ATTGTGATTGAAAAGATGACTCGCAACAAGCGAAAA
                      ____________________________________________________________
consensus             ATAAAAAAGAAAGAGAAGCAGGAAATTGTGATTGAAAAGATGACTCGCAACAAGCGAAAA
 
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JMSF045A23-           TGCATCACCACCATAAAGGGGCTGGAATTATTTGGCATCAAACTAAGTGATGCTTCAAAG
JMSF049H01-           TGCATCACCACCATAAAGGGGCTGGAATTATTTGGCATCAAACTAAGTGATGCTTCAAAG
rJMSF045A23+          TGCATCACCACCATAAAGGGGCTGGAATTATTTGGCATCAAACTAAGTGATGCTTCAAAG
rJMSF049H01+          TGCATCACCACCATAAAGGGGCTGGAATTATTNGGCATCAAACTAAGTGATGCTTCAAAG
                      ____________________________________________________________
consensus             TGCATCACCACCATAAAGGGGCTGGAATTATTTGGCATCAAACTAAGTGATGCTTCAAAG
 
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JMSF045A23-           AAGCTTGGTAAAAAGTTTGCAACTGGAGCCTCTGTTGTTAAGGGCCCAACTGAAAAGGAA
JMSF049H01-           AAGCTTGGTAAAAAGTTTGCAACTGGAGCCTCTGTTGTTAAGGGCCCAACTGAAAAGGAA
rJMSF045A23+          AAGCTTGGTAAAAAGTTTGCAACTGGAGCCTCTGTTGTTAAGGGCCCAACTGAAAAGGAA
rJMSF049H01+          AAGCTTGGTAAAAAGTTTGCAACTGGAGCCTCTGTTGTTAAGGGCCCAACTGAAAAGGAA
                      ____________________________________________________________
consensus             AAGCTTGGTAAAAAGTTTGCAACTGGAGCCTCTGTTGTTAAGGGCCCAACTGAAAAGGAA
 
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JMSF045A23-           CAGATTGATGTTCAAGGAGATATAGCCTATGACATTGTGGATTTTCTTACAGAGACCTGG
JMSF049H01-           CAGATTGATGTTCAAGGAGATATAGCCTATGACATTGTGGATTTTCTTACAGAGACCTGG
rJMSF045A23+          CAGATTGATGTTCAAGGAGATATAGCCTATGACATTGTGGATTTTCTTACAGAGACCTGG
rJMSF049H01+          CAGATTGATGTTCAAGGAGATATAGCCTATGACATTGTGGATTTTCTTACAGAGACCTGG
                      ____________________________________________________________
consensus             CAGATTGATGTTCAAGGAGATATAGCCTATGACATTGTGGATTTTCTTACAGAGACCTGG
 
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JMSF045A23-           CCAGATGTCCCCGAGTCTGCAATTTTCTTTGTTGAAGA                      
JMSF049H01-           CCAGATGTCCCCGAGTCTGCAATTTTCTTTGTTGAAGATGGGAAAAAGGTCCCGGCTGTA
rJMSF045A23+          CCAGATGTCCCCGAGTCTGCAATTTTCTTTGTTGAAGATGGGAAAAAGGTCCCGGCTGTA
rJMSF049H01+          CCAGATGTCCCCGAGTCTGCAATTTTCTTTGTTGAAGATGGGAAAAAGGTCCCGGCTGTA
                      ____________________________________________________________
consensus             CCAGATGTCCCCGAGTCTGCAATTTTCTTTGTTGAAGATGGGAAAAAGGTCCCGGCTGTA
 
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JMSF049H01-           TAAAATTTTGAAGATGCTGTACCCTTGTTAATGGAAGCAAGCCATTTCA           
rJMSF045A23+          TAAAATTTTGAAGATGCTGTACCCTTGTTAATGGAAGCAAGCCATTTCATGCAAAAAACC
rJMSF049H01+          TAAAATTTTGAAGATGCTGTACCCTTGTTAATGGAAGCAAGCCATTTCATGCAAAAAACC
                      ____________________________________________________________
consensus             TAAAATTTTGAAGATGCTGTACCCTTGTTAATGGAAGCAAGCCATTTCATGCAAAAAACC
 
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rJMSF045A23+          TTCCATTGTACTACTGCGGACGTATGCAAGATGGTCTATATTAAAACGTAGCGACCCCAT
rJMSF049H01+          TTCCATTGTACTACTGCGGACGTATGCAAGATGGTCTATATTAAAACGTAGCGACCCCAT
                      ____________________________________________________________
consensus             TTCCATTGTACTACTGCGGACGTATGCAAGATGGTCTATATTAAAACGTAGCGACCCCAT
 
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rJMSF045A23+          CAAGTATAAGTTGATCCCCGCATTTTCCCAATGAAAGATTTTGACTTGATGGTCCTGTTT
rJMSF049H01+          CAAGTATAAGTTGATCCCCGCATTTTCCCAATGAAAGATTTTGACTTGATGGTCCTGTTT
                      ____________________________________________________________
consensus             CAAGTATAAGTTGATCCCCGCATTTTCCCAATGAAAGATTTTGACTTGATGGTCCTGTTT
 
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rJMSF045A23+          AAAGGTATAGAGAAAACATCTGAACAATGTAACTCCCTTTCCTATTGAAGTTTCCCCATC
rJMSF049H01+          AAAGGTATAGAGAAAACATCTGAACAATGTAACTCCCTTTCCTATTGAAGTTTCCCCATC
                      ____________________________________________________________
consensus             AAAGGTATAGAGAAAACATCTGAACAATGTAACTCCCTTTCCTATTGAAGTTTCCCCATC
 
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rJMSF045A23+          TTTTAAACTTTCCCTAGTTTTAATCAAGGAGGCAATTAGCATATTTCCGCCCCCTGTATG
rJMSF049H01+          TTTTAAACTTTCCCTAGTTTTAATCAAGGAGGCAATTAGCATATTTCCGCCCCCTGTATG
                      ____________________________________________________________
consensus             TTTTAAACTTTCCCTAGTTTTAATCAAGGAGGCAATTAGCATATTTCCGCCCCCTGTATG
 
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rJMSF045A23+          GTTGAAGTAACTCTGCTTGCACTAAAA                                 
rJMSF049H01+          GTTGAAGTAACTCTGCTTGCACTAAAACTTGGATTGACAGACAATTCCAACATTTACCCT
                      ____________________________________________________________
consensus             GTTGAAGTAACTCTGCTTGCACTAAAACTTGGATTGACAGACAATTCCAACATTTACCCT
 
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rJMSF049H01+          CAATGCTTATGCTATTTTCCCTTCATAAACACTCTCATATGCCATTATGATGATAAAGAC
                      ____________________________________________________________
consensus             CAATGCTTATGCTATTTTCCCTTCATAAACACTCTCATATGCCATTATGATGATAAAGAC
 
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rJMSF049H01+          TGAGAGACATGTATACTGTATTGTATTTTTGTGGCATTACTCTGTAAATTGATGAAATGT
                      ____________________________________________________________
consensus             TGAGAGACATGTATACTGTATTGTATTTTTGTGGCATTACTCTGTAAATTGATGAAATGT