Contig 007234:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF049E01+                                                         AGTGAATGATACT
                      ____________________________________________________________
consensus                                                            AGTGAATGATACT
 
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rJMSF048O16+                                     TAGAAGAGCATGGATGTCAGGAATGGAAAGGAA
rJMSF049E01+          AAGTTTCAGGAAATGGTAGATGANGTTTAGAAGAGCATGGATGTCAGGAATGGAAAGGAA
                      ____________________________________________________________
consensus             AAGTTTCAGGAAATGGTAGATGANGTTTAGAAGAGCATGGATGTCAGGAATGGAAAGGAA
 
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rJMSF048O16+          AAGAAATTATTCATTCCCCAAAAAATTCATCATTTCTTGATCAGAATACAGAAGAAATTA
rJMSF049E01+          AAGAAATTATTCATTCCCCAAAAAATTCATCATTTCTTGATCAGAATACAGAAGAAATTA
                      ____________________________________________________________
consensus             AAGAAATTATTCATTCCCCAAAAAATTCATCATTTCTTGATCAGAATACAGAAGAAATTA
 
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rJMSF048O16+          ATGTTCTTGAAACCACAAATGAACATGAAGAGACCATTGACATAAAACTGAATGATCAAC
rJMSF049E01+          ATGTTCTTGAAACCACAAATGAACATGAAGAGACCATTGACATAAAACTGAATGATCAAC
                      ____________________________________________________________
consensus             ATGTTCTTGAAACCACAAATGAACATGAAGAGACCATTGACATAAAACTGAATGATCAAC
 
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rJMSF048O16+          AAGAACAAGAAACAGTTGCCTGTGAAGATCAGAGCAATGAGAAAGCAAAAATGGGTATGG
rJMSF049E01+          AAGAACAAGAAACAGTTGCCTGTGAAGATCAGAGCAATGAGAAAGCAAAAATGGGTATGG
                      ____________________________________________________________
consensus             AAGAACAAGAAACAGTTGCCTGTGAAGATCAGAGCAATGAGAAAGCAAAAATGGGTATGG
 
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rJMSF048O16+          TAGATGATCCTTATATAGAGTGCTCTAGCGATGAAGTTGAAGAAATAAGTTCTCCATTCC
rJMSF049E01+          TAGATGATCCTTATATAGAGTGCTCTAGCGATGAAGTTGAAGAAATAAGTTCTCCATTCC
                      ____________________________________________________________
consensus             TAGATGATCCTTATATAGAGTGCTCTAGCGATGAAGTTGAAGAAATAAGTTCTCCATTCC
 
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rJMSF048O16+          AACAGAACAATGAAGTATCTTCTGAGGAGGAGGAACAACAAGAACTACAGGATTCAGAGG
rJMSF049E01+          AACAGAACAATGAAGTATCTTCTGAGGAGGAGGAACAACAAGAACTACAGGATTCAGAGG
                      ____________________________________________________________
consensus             AACAGAACAATGAAGTATCTTCTGAGGAGGAGGAACAACAAGAACTACAGGATTCAGAGG
 
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rJMSF048O16+          ATACAACAAAGCAGGAGCAAGTAAGCCAAAAGCAGTTACGGTCTCGGGTTATCAAGGCTG
rJMSF049E01+          ATACAACAAAGCAGGAGCAAGTAAGCCAAAAGCAGTTACGGTCTCGGGTTATCAAGGCTG
                      ____________________________________________________________
consensus             ATACAACAAAGCAGGAGCAAGTAAGCCAAAAGCAGTTACGGTCTCGGGTTATCAAGGCTG
 
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rJMSF048O16+          AACCAGGTACTCAAGAGCATCGAATTCCCCAAGTCGTGTTGTCACTGCAAGCAATAACTC
rJMSF049E01+          AACCAGGTACTCAAGAGCATCGAATTCCCCAAGTCGTGTTGTCACTGCAAGCAATAACTC
                      ____________________________________________________________
consensus             AACCAGGTACTCAAGAGCATCGAATTCCCCAAGTCGTGTTGTCACTGCAAGCAATAACTC
 
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rJMSF048O16+          CACCAAGAAGAGTCACTAGAAGAACGGCAACTACTACTGCCGGTTGCATTTCTCCATTAC
rJMSF049E01+          CACCAAGAAGAGTCACTAGAAGAACGGCAACTACTACTGCCGGTTGCATTTCTCCATTAC
                      ____________________________________________________________
consensus             CACCAAGAAGAGTCACTAGAAGAACGGCAACTACTACTGCCGGTTGCATTTCTCCATTAC
 
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rJMSF048O16+          TCGACGAGCAAGCTCCACAGCAGAGAAAGAAGCGCGTAAAAAGTCAAGTAGGTGAAATAT
rJMSF049E01+          TCGACGAGCAAGCTCCACAGCAGAGAAAGAAGCGCGTAAAAAGTCAAGTAGGTGAAATAT
                      ____________________________________________________________
consensus             TCGACGAGCAAGCTCCACAGCAGAGAAAGAAGCGCGTAAAAAGTCAAGTAGGTGAAATAT
 
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rJMSF048O16+          CCCGCATGCCTAGACGATCAACTCGTCTTTCGTCGGGACAATCAAGAAAGCGGGTATCAC
rJMSF049E01+          CCCGCATGCCTAGACGATCAACTCGTCTTTCGTCGGGACAATCAAGAAAGCGGGTATCAC
                      ____________________________________________________________
consensus             CCCGCATGCCTAGACGATCAACTCGTCTTTCGTCGGGACAATCAAGAAAGCGGGTATCAC
 
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rJMSF048O16+          GCAGTCGAACCTGAGGAAGACAACATAGATTATTCTTAGGAAGCATGTTAATGATGTCTT
rJMSF049E01+          GCAGTCGAACCTGAGGAAGACAACATAGATTATTCTTAGGAAGCATGTTAATGATGTCTT
                      ____________________________________________________________
consensus             GCAGTCGAACCTGAGGAAGACAACATAGATTATTCTTAGGAAGCATGTTAATGATGTCTT
 
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rJMSF048O16+          AAACTTTCTCTCTTCAAGGATAGTATGTACCTTTATTTGTACCAAGAATTCTGCTGCTT 
rJMSF049E01+          AAACTTTCTCTCTTCAAGGATAGTATGTACCTTTATTTGTACCAAGAATTCTGCTGCTTT
                      ____________________________________________________________
consensus             AAACTTTCTCTCTTCAAGGATAGTATGTACCTTTATTTGTACCAAGAATTCTGCTGCTTT