| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF020F13 | Sequence | 677 | 007231 (3) | ref|XP_009769326.1| | 7e-101 | PREDICTED: glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a | |||||
| JMFF025P07 | Sequence | 574 | 007709 (5) | ref|XP_009769326.1| | 3e-74 | PREDICTED: glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a | 787 | 007231 (3) | ref|XP_009769326.1| | 7e-117 | PREDICTED: glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a |
| JMSF048M18 | Sequence | 675 | 007709 (5) | ref|XP_009769326.1| | 6e-94 | PREDICTED: glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a | 741 | 007231 (3) | ref|XP_009769326.1| | 2e-114 | PREDICTED: glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a |
This contig is upended
. : . : . : . : . : . :
rJMFF025P07+ CTTGCTTGTTGAGCGGGGTGCAGATGTTTAC
____________________________________________________________
consensus CTTGCTTGTTGAGCGGGGTGCAGATGTTTAC
. : . : . : . : . : . :
rJMFF025P07+ AAGATAGATAAAGCAATTACCGAAATTTGGAATGCCCCATGGGCCCCTTTAGATTGTGTG
rJMSF048M18+ TGGGCCCCNTTAGATTGTGTG
____________________________________________________________
consensus AAGATAGATAAAGCAATTACCGAAATTTGGAATGCCCCATGGGCCCCTTTAGATTGTGTG
. : . : . : . : . : . :
rJMFF020F13+ GTTGCAATTGCAACTGGAGGCCAATATGTGATGAATTTTCCTG
rJMFF025P07+ ATCTTGTTGGCTTTGGTGTTGCAATTGCAACTGGAGGCCAATATGTGATGAATTTTCCTG
rJMSF048M18+ ATCTTGTTGGCTTTGGTGTTGCAATTGCAACTGGAGGCCAATATGTGATGAATTTTCCTG
____________________________________________________________
consensus ATCTTGTTGGCTTTGGTGTTGCAATTGCAACTGGAGGCCAATATGTGATGAATTTTCCTG
. : . : . : . : . : . :
rJMFF020F13+ AAAGAACTTATAAATCCATGTTGATACCAATCATGCAAGAAGACAAAAGGGGAGGTGAAG
rJMFF025P07+ AAAGAACTTATAAATCCATGTTGATACCAATCATGCAAGAAGACAAAAGGGGAGGTGAAG
rJMSF048M18+ AAAGAACTTATAAATCCATGTTGATACCAATCATGCAAGAAGACAAAAGGGGAGGTGAAG
____________________________________________________________
consensus AAAGAACTTATAAATCCATGTTGATACCAATCATGCAAGAAGACAAAAGGGGAGGTGAAG
. : . : . : . : . : . :
rJMFF020F13+ CCACTCGTAGAGGATTTTATGTTTACGATGACAGGCGCAAAGCCAGCCCCGACCNTGAAA
rJMFF025P07+ CCACTCGTAGAGGATTTTATGTTTACGATGACAGGCGCAAAGCCAGCCCCGACCCTGAAA
rJMSF048M18+ CCACTCGTAGAGGATTTTATGTTTACGATGACAGGCGCAAAGCCAGCCCCGACCCTGAAA
____________________________________________________________
consensus CCACTCGTAGAGGATTTTATGTTTACGATGACAGGCGCAAAGCCAGCCCCGACCCTGAAA
. : . : . : . : . : . :
rJMFF020F13+ TAAAAAAATATATNGAGAAGGCAAGAGAGATGTCTGGTGTCTCCATTGACCNTAAGTTGA
rJMFF025P07+ TAAAAAAATATATTGAGAAGGCAAGAGAGATGTCTGGTGTCTCCATTGACCCTAAGTTGA
rJMSF048M18+ TAAAAAAATATATTGAGAAGGCAAGAGAGATGTCTGGTGTCTCCATTGACCCTAAGTTGA
____________________________________________________________
consensus TAAAAAAATATATTGAGAAGGCAAGAGAGATGTCTGGTGTCTCCATTGACCCTAAGTTGA
. : . : . : . : . : . :
rJMFF020F13+ CGAAACTTTCGGATAAAGATATTGTGGAGATGACATTTTTGCCAGTGGTGAATGAAGCCT
rJMFF025P07+ CGAAACTTTCGGATAAAGATATTGTGGAGATGACATTTTTGCCAGTGGTGAATGAAGCCT
rJMSF048M18+ CGAAACTTTCGGATAAAGATATTGTGGAGATGACATTTTTGCCAGTGGTGAATGAAGCCT
____________________________________________________________
consensus CGAAACTTTCGGATAAAGATATTGTGGAGATGACATTTTTGCCAGTGGTGAATGAAGCCT
. : . : . : . : . : . :
rJMFF020F13+ GTAGAGTACTTGCTGAAGGTATTGCTATCAAAGCTTCTGATCTGGACATTGCTGGTGTGA
rJMFF025P07+ GTAGAGTACTTGCTGAAGGTATTGCTATCAAAGCTTCTGATCTGGACATTGCTGGTGTGA
rJMSF048M18+ GTAGAGTACTTGCTGAAGGTATTGCTATCAAAGCTTCTGATCTGGACATTGCTGGTGTGA
____________________________________________________________
consensus GTAGAGTACTTGCTGAAGGTATTGCTATCAAAGCTTCTGATCTGGACATTGCTGGTGTGA
. : . : . : . : . : . :
rJMFF020F13+ TGGGCATGGGTTTCCCTCCTTACAGGGGAGGGGTCTTGTTTTGGGCTGACACTNTGGGGT
rJMFF025P07+ TGGGCATGGGTTTCCCTCCTTACAGGGGAGGGGTCTTGTTTTGGGCTGACACTCTGGGGT
rJMSF048M18+ TGGGCATGGGTTTCCCTCCTTACAGGGGAGGGGTCTTGTTTTGGGCTGACACTCTGGGGT
____________________________________________________________
consensus TGGGCATGGGTTTCCCTCCTTACAGGGGAGGGGTCTTGTTTTGGGCTGACACTCTGGGGT
. : . : . : . : . : . :
rJMFF020F13+ CAAAGTACATTTACTCANAGTTGAATGAGTGGTCAAAGATGTATGGAGCTTTCTTTGAGC
rJMFF025P07+ CAAAGTACATTTACTCAAAGTTGAATGAGTGGTCAAAGATGTATGGAGCTTTCTTTGAGC
rJMSF048M18+ CAAAGTACATTTACTCAAAGTTGAATGAGTGGTCAAAGATGTATGGAGCTTTCTTTGAGC
____________________________________________________________
consensus CAAAGTACATTTACTCAAAGTTGAATGAGTGGTCAAAGATGTATGGAGCTTTCTTTGAGC
. : . : . : . : . : . :
rJMFF020F13+ CATGTTCTTACTTGGCTGAAAGAGCATCCAAGGGTGCTCCTATGAGTTTGAAAATGGACA
rJMFF025P07+ CATGTTCTTACTTGGCTGAAAGAGCATCCAAGGGTGCTCCTCTGAGTTTGAAAATGGACA
rJMSF048M18+ CATGTTCTTACTTGGCTGAAAGAGCATCCAAGGGTGCTCCTCTGAGTTTGAAAATGGACA
____________________________________________________________
consensus CATGTTCTTACTTGGCTGAAAGAGCATCCAAGGGTGCTCCTCTGAGTTTGAAAATGGACA
. : . : . : . : . : . :
rJMFF020F13+ CAGGAAAGTCTCGCCTTTAATCAAATCATCAGAGTGGCGTCTTGTTAAATCTTTATTGCT
rJMFF025P07+ CAGGAAAGTCTCGCCTTTAATCAAATCATCAGAGTGGCGTCTTGTTAAATCTTTATTGCT
rJMSF048M18+ CAGGAAAGTCTCGCCTTTAATCAAATCATCAGAGTGGCGTCTTGTTAAATCTTTATTGCT
____________________________________________________________
consensus CAGGAAAGTCTCGCCTTTAATCAAATCATCAGAGTGGCGTCTTGTTAAATCTTTATTGCT
. : . : . : . : . : . :
rJMFF020F13+ ATTATTATNGTGTTTTATCTTTAGTATAAGAAGGAAATGAGGAATTGATCTGTTTAATCA
rJMFF025P07+ ATTATTATTGTGTTTTATCTTTAGTATAAGAAGGAAATGAGGAATTGATCTGTTTAATCA
rJMSF048M18+ ATTATTATTGTGTTTTATCTTTAGTATAAGAAGGAAATGAGGAATTGATCTGTTTAATCA
____________________________________________________________
consensus ATTATTATTGTGTTTTATCTTTAGTATAAGAAGGAAATGAGGAATTGATCTGTTTAATCA
. : . : . : . : . : . :
rJMFF020F13+ NC-TTTGAAGGGAGAAATAATACAAT
rJMFF025P07+ ACTTTTGAAGGGAGAAATAATACAAT
rJMSF048M18+ ACTTTTGAAGGGAGAAATAATACAATTGAGAAATAATGTAATGGCCAGGTGTAGTAGTGT
____________________________________________________________
consensus ACTTTTGAAGGGAGAAATAATACAATTGAGAAATAATGTAATGGCCAGGTGTAGTAGTGT