Contig 007229:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF020L22Sequence670015736ref|XP_009771933.1|1e-47PREDICTED: probable folate-biopterin transporter 7 [Nicotiana sylvestris]726007229 (2)ref|XP_009601818.1|8e-94PREDICTED: probable folate-biopterin transporter 7 isoform X2 [Nicotiana toment
JMSF048G12Sequence685008072 (7)ref|XP_009592735.1|4e-53PREDICTED: thioredoxin H2-like [Nicotiana tomentosiformis]774007229 (2)ref|XP_009601818.1|2e-101PREDICTED: probable folate-biopterin transporter 7 isoform X2 [Nicotiana toment

Alignment

This contig is upended


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rJMSF020L22+                                                               CTTGTGG
rJMSF048G12+             TCCCCAAAAGTATGTCTAATCATCACGGGATCAAAAAACAGCTCTCAGAACTTGTGG
                      ____________________________________________________________
consensus                TCCCCAAAAGTATGTCTAATCATCACGGGATCAAAAAACAGCTCTCAGAACTTGTGG
 
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rJMSF020L22+          TTGCGCTGAAGAAACCAGAAATCTCTTACTCCATAGCTTGGTTTGCCGCGTCGTTTGCAG
rJMSF048G12+          TTGCGCTGAAGAAACCAGAAATCTCTTACTCCATAGCTTGGTTTGCCGCGTCGTTTGCAG
                      ____________________________________________________________
consensus             TTGCGCTGAAGAAACCAGAAATCTCTTACTCCATAGCTTGGTTTGCCGCGTCGTTTGCAG
 
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rJMSF020L22+          CAGTTCCTGCTCTAACAGGGACCATGTTCTACTACCAAACACAACACTTGAAGATTGAGA
rJMSF048G12+          CAGTTCCTGCTCTAACAGGGACCATGTTCTACTACCAAACACAACACTTGAAGATTGAGA
                      ____________________________________________________________
consensus             CAGTTCCTGCTCTAACAGGGACCATGTTCTACTACCAAACACAACACTTGAAGATTGAGA
 
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rJMSF020L22+          CCTCAGTACTGGGTATTTCTAAAGTGTTTGGACAGATAATGATGCTTTTGTGGGGCATTA
rJMSF048G12+          CCTCAGTACTGGGTATTTCTAAAGTGTTTGGACAGATAATGATGCTTTTGTGGGGCATTA
                      ____________________________________________________________
consensus             CCTCAGTACTGGGTATTTCTAAAGTGTTTGGACAGATAATGATGCTTTTGTGGGGCATTA
 
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rJMSF020L22+          TCTATGACAAACACCTTAAGTCAATCTCACCAAGGAAGCTAATAGCTGGAATTCAGGTGT
rJMSF048G12+          TCTATGACAAACACCTTAAGTCAATCTCACCAAGGAAGCTAATAGCTGGAATTCAGGTGT
                      ____________________________________________________________
consensus             TCTATGACAAACACCTTAAGTCAATCTCACCAAGGAAGCTAATAGCTGGAATTCAGGTGT
 
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rJMSF020L22+          TAATGGCAGTTCTAATGTTATCGGACATGCTGTTTGTGAAAGGTGTATATGGGAGGCTAG
rJMSF048G12+          TAATGGCAGTTCTAATGTTATCGGACATGCTGTTTGTGAAAGGTGTATATGGGAGGCTAG
                      ____________________________________________________________
consensus             TAATGGCAGTTCTAATGTTATCGGACATGCTGTTTGTGAAAGGTGTATATGGGAGGCTAG
 
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rJMSF020L22+          GAATTCCAGAGTCTTTGTACGTTGTGATTTTCTCAGGCTTCTTGGAGATGCTATGTTTTT
rJMSF048G12+          GAATTCCAGAGTCTTTGTACGTTGTGATTTTCTCAGGCTTCTTGGAGATGCTATGTTTTT
                      ____________________________________________________________
consensus             GAATTCCAGAGTCTTTGTACGTTGTGATTTTCTCAGGCTTCTTGGAGATGCTATGTTTTT
 
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rJMSF020L22+          TCAAGATTCTCCCGTTCAGCGTTTTAATGGCGCAGCTTTGCCCACCGGGGTGCGAAGGAT
rJMSF048G12+          TCAAGATTCTCCCGTTCAGCGTTTTAATGGCGCAGCTTTGCCCACCGGGGTGCGAAGGAT
                      ____________________________________________________________
consensus             TCAAGATTCTCCCGTTCAGCGTTTTAATGGCGCAGCTTTGCCCACCGGGGTGCGAAGGAT
 
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rJMSF020L22+          CTGTAATGGCGTTTCTCATGTCTGCTGTAGCTCTTGCCATGGTAGTAAGTGGGTATCTTG
rJMSF048G12+          CTGTAATGGCGTTTCTCATGTCTGCTGTAGCTCTTGCCATGGTAGTAAGTGGGTATCTTG
                      ____________________________________________________________
consensus             CTGTAATGGCGTTTCTCATGTCTGCTGTAGCTCTTGCCATGGTAGTAAGTGGGTATCTTG
 
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rJMSF020L22+          GGGTTGCCTTGGCATCGCATGTCAAGGTTACATCAGGAAATGATTTCTCAGGCTTTCCAT
rJMSF048G12+          GGGTTGCCTTGGCATCGCATGTCAAGGTTACATCAGGAAATGATTTCTCAGGCTTTCCAT
                      ____________________________________________________________
consensus             GGGTTGCCTTGGCATCGCATGTCAAGGTTACATCAGGAAATGATTTCTCAGGCTTTCCAT
 
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rJMSF020L22+          CTGGTCTTTTGATACAAGCAGCATCAACACTTGTACCACTTGTTTGTTCATCATTTATAC
rJMSF048G12+          CTGGTCTTTTGATACAAGCAGCATCAACACTTGTACCACTTGTTTGTTCATCATTTATAC
                      ____________________________________________________________
consensus             CTGGTCTTTTGATACAAGCAGCATCAACACTTGTACCACTTGTTTGTTCATCATTTATAC
 
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rJMSF020L22+          CAGACGGCCCAAAGCCAAAAACCAGCTAGTTTTTTATTTAATCAAGGAATTATTCAAATA
rJMSF048G12+          CAGACGGCCCAAAGCCAAAAACCAGCTAGTTTTTTATTTAATCA---AATTATTCAAATA
                      ____________________________________________________________
consensus             CAGACGGCCCAAAGCCAAAAACCAGCTAGTTTTTTATTTAATCAAGGAATTATTCAAATA
 
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rJMSF020L22+          CTTGATCATCCTGTAATTTGTTTAGTTGTAGTGATTTGTTGTTGTACAATTTTGAGGGT 
rJMSF048G12+          CTTGATCATCCTGTAATTTGTTTAGTTGTAGTGATTTGTTGTTGTACAATTTTGAGGGTA
                      ____________________________________________________________
consensus             CTTGATCATCCTGTAATTTGTTTAGTTGTAGTGATTTGTTGTTGTACAATTTTGAGGGTA