Contig 007222:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF016L17-                                                                  CTCTG
JMSF045M06-                                                       GGAATCTCTCTCTCTG
                      ____________________________________________________________
consensus                                                         GGAATCTCTCTCTCTG
 
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JMSF016L17-           CGGTTTCGTTCCTCTGAACTTGTCCGGATCCCTTCCTGTTCGCTCCTAGGGGATAGGAAG
JMSF045M06-           CGGTTTCGTTCCTCTGAACTTGTCCGGATCCCTTCCTGTTCGCTCCTAGGGGATAGGAAG
                      ____________________________________________________________
consensus             CGGTTTCGTTCCTCTGAACTTGTCCGGATCCCTTCCTGTTCGCTCCTAGGGGATAGGAAG
 
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JMSF016L17-           CAAACACTTGAAAGAAATCATCTTTAATCTCCTCAGCGAACA---------GGAAAGTCC
JMSF045M06-           CAAACACTTGAAAGAAATCATCTTTAATCTCCTCAGCGAACAGGTCAGCTTGGAAAGTCC
                      ____________________________________________________________
consensus             CAAACACTTGAAAGAAATCATCTTTAATCTCCTCAGCGAACAGGTCAGCTTGGAAAGTCC
 
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JMSF016L17-           AGAACATGGAACAAAACGGTGCTGGGTGCCAAACTCCTCAAGCTCCTACGCTTTGCGTCA
JMSF045M06-           AGAACATGGAACAAAACGGTGCTGGGTGCCAAACTCCTCAAGCTCCTACGCTTTGCGTCA
rJMSF016L17+                                                               TGCGTCA
                      ____________________________________________________________
consensus             AGAACATGGAACAAAACGGTGCTGGGTGCCAAACTCCTCAAGCTCCTACGCTTTGCGTCA
 
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JMSF016L17-           ATAACTGTGGATTCTTTGGAACTCCATCAAACATGAACATGTGTTCCAAGTGCTATAAAG
JMSF045M06-           ATAACTGTGGATTCTTTGGAACTCCATCAAACATGAACATGTGTTCCAAGTGCTATAAAG
rJMSF016L17+          ATAACTGTGGATTCTTTGGAACTCCATCAAACATGAACATGTGTTCCAAGTGCTATAAAG
rJMSF045M06+                                             AACATGTGTTCCAAGTGCTATAAAG
                      ____________________________________________________________
consensus             ATAACTGTGGATTCTTTGGAACTCCATCAAACATGAACATGTGTTCCAAGTGCTATAAAG
 
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JMSF016L17-           ATGCGATGTTGAAACAAGATCAAGCTAAACTTGCTGCTTCTTCGCTCGAGAGTATAATGA
JMSF045M06-           ATGCGATGTTGAAACAAGATCAAGCTAAACTTGCTGCTTCTTCGCTCGAGAGTATAATGA
rJMSF016L17+          ATGCGATGTTGAAACAAGATCAAGCTAAACTTGCTGCTTCTTCGCTCGAGAGTATAATGA
rJMSF045M06+          ATGCGATGTTGAAACAAGATCAAGCTAAACTTGCTGCTTCTTCGCTCGAGAGTATAATGA
                      ____________________________________________________________
consensus             ATGCGATGTTGAAACAAGATCAAGCTAAACTTGCTGCTTCTTCGCTCGAGAGTATAATGA
 
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JMSF016L17-           ATGGCGACTCCAGCTCCAGTGCGAAGCCAGTAGGTGTCACCCTAGCTGCACAGGATGGTC
JMSF045M06-           ATGGCGACTCCAGCTCCAGTGCGAAGCCAGTAGGTGTCACCCTAGCTGCACAGGATGGTC
rJMSF016L17+          ATGGCGACTCCAGCTCCAGTGCGAAGCCAGTAGGTGTCACCCTAGCTGCACAGGATGGTC
rJMSF045M06+          ATGGCGACTCCAGCTCCAGTGCGAAGCCAGTAGGTGTCACCCTAGCTGCACAGGATGGTC
                      ____________________________________________________________
consensus             ATGGCGACTCCAGCTCCAGTGCGAAGCCAGTAGGTGTCACCCTAGCTGCACAGGATGGTC
 
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JMSF016L17-           CCACAGAGACCCTGGCGGTACCAACCCAAACATCCTCCCCGTTGTTGGAGAATGTCAATG
JMSF045M06-           CCACAGAGACCCTGGCGGTACCAACCCAAACATCCTCCCCGTTGTTGGAGAATGTCAATG
rJMSF016L17+          CCACAGAGACCCTGGCGGTACCAACCCAAACATCCTCCCCGTTGTTGGAGAATGTCAATG
rJMSF045M06+          CCACAGAGACCCTGGCGGTACCAACCCAAACATCCTCCCCGTTGTTGGAGAATGTCAATG
                      ____________________________________________________________
consensus             CCACAGAGACCCTGGCGGTACCAACCCAAACATCCTCCCCGTTGTTGGAGAATGTCAATG
 
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JMSF016L17-           GGGAGAAGCCCAAGGAAGGTCCAAGCAGATGCAGCAGTTGCAGGGAGCGTGTTGGCTTAA
JMSF045M06-           GGGAGAAGCCCAAGGAAGGTCCAAGCAGATGCAGCAGTTGCAGGAAGCGTGTTGGCTTAA
rJMSF016L17+          GGGAGAAGCCCAAGGAAGGTCCAAGCAGATGCAGCAGTTGCAGGGAGCGTGTTGGCTTAA
rJMSF045M06+          GGGAGAAGCCCAAGGAAGGTCCAAGCAGATGCAGCAGTTGCAGGAAGCGTGTTGGCTTAA
                      ____________________________________________________________
consensus             GGGAGAAGCCCAAGGAAGGTCCAAGCAGATGCAGCAGTTGCAGGGAGCGTGTTGGCTTAA
 
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JMSF016L17-           CAGGTTTCACTTGTCGTTGTGGAAATCTCTTCTGTTCAGCCCATCGTTACTCAGACAAGC
JMSF045M06-           CAGGTTTCACTTGTCGTTGTGGAAATCTCTTCTGTTCAGCCCATCGTTACTCAGACAAGC
rJMSF016L17+          CAGGTTTCACTTGTCGTTGTGGAAATCTCTTCTGTTCAGCCCATCGTTACTCAGACAAGC
rJMSF045M06+          CAGGTTTCACTTGTCGTTGTGGAAATCTCTTCTGTTCAGCCCATCGTTACTCAGACAAGC
                      ____________________________________________________________
consensus             CAGGTTTCACTTGTCGTTGTGGAAATCTCTTCTGTTCAGCCCATCGTTACTCAGACAAGC
 
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JMSF016L17-           ACGACTGCCCTTTCGACTACCACAAGGCAGCTCA                          
JMSF045M06-           ACGACTGCCCTTTCGACTACCACAAGGCAGCTCAGGACACAATAGCCAAAGCCAACCCGG
rJMSF016L17+          ACGACTGCCCTTTCGACTACCACAAGGCAGCTCAGGACACAATAGCCAAAGCCAACCCGG
rJMSF045M06+          ACGACTGCCCTTTCGACTACCACAAGGCAGCTCAGGACACAATAGCCAAAGCCAACCCGG
                      ____________________________________________________________
consensus             ACGACTGCCCTTTCGACTACCACAAGGCAGCTCAGGACACAATAGCCAAAGCCAACCCGG
 
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JMSF045M06-           TCGTTAAGGCTGAAAAACTCGACAAGATCTAGCCAGGCGACTTCACTTCACAGTGAGTGT
rJMSF016L17+          TCGTTAAGGCTGAAAAACTCGACAAGATCTAGCCAGGCGACTTCACTTCACAGTGAGTGT
rJMSF045M06+          TCGTTAAGGCTGAAAAACTCGACAAGATCTAGCCAGGCGACTTCACTTCACAGTGAGTGT
                      ____________________________________________________________
consensus             TCGTTAAGGCTGAAAAACTCGACAAGATCTAGCCAGGCGACTTCACTTCACAGTGAGTGT
 
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JMSF045M06-           TCACAAACTCCTATATATCCATCCCAGTTGTCGTTTCCATCGTGGCTTCGGTGATATCTC
rJMSF016L17+          TCACAAACTCCTATATATCCATCCCAGTTGTCGTTTCCATCGTGGCTTCGGTGATATCTC
rJMSF045M06+          TCACAAACTCCTATATATCCATCCCAGTTGTCGTTTCCATCGTGGCTTCGGTGATATCTC
                      ____________________________________________________________
consensus             TCACAAACTCCTATATATCCATCCCAGTTGTCGTTTCCATCGTGGCTTCGGTGATATCTC
 
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JMSF045M06-           TGTAGTGACTTA                                                
rJMSF016L17+          TGTAGTGACTTATGAGATGCCTAGAATGGTGAGAGAAAGAAGGTAGTCTAGGCTTGATAT
rJMSF045M06+          TGTAGTGACTTATGAGATGCCTAGAATGGTGAGAGAAAGAAGGTAGTCTAGGCTTGATAT
                      ____________________________________________________________
consensus             TGTAGTGACTTATGAGATGCCTAGAATGGTGAGAGAAAGAAGGTAGTCTAGGCTTGATAT
 
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rJMSF016L17+          GGCATCTAGTGATCAATGAATTCTATGTTATTTGTTGTTGGTGTGGGGATTATACTTTGG
rJMSF045M06+          GGCATCTAGTGATCAATGAATTCTATGTTATTTGTTGTTGGTGTGGGGATTATACTTTGG
                      ____________________________________________________________
consensus             GGCATCTAGTGATCAATGAATTCTATGTTATTTGTTGTTGGTGTGGGGATTATACTTTGG
 
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rJMSF016L17+          TTTGATCTCAAGTCCTCTGTACTCTGGCTTGTTGGGCTTTTTGTGCTTTCATCTTCGAA 
rJMSF045M06+          TTTGATCTCAAGTCCTCTGTACTCTGGCTTGTTGGGCTTTTTGTGCTTTCATCTTCGAAT
                      ____________________________________________________________
consensus             TTTGATCTCAAGTCCTCTGTACTCTGGCTTGTTGGGCTTTTTGTGCTTTCATCTTCGAAT