Contig 007217:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN036E13Sequence610007217 (2)ref|XP_009600804.1|2e-69PREDICTED: protein yippee-like [Nicotiana tomentosiformis]
JMSF044A15Sequence933024269emb|CAN76144.1|5e-07hypothetical protein VITISV_024928 [Vitis vinifera]574007217 (2)ref|XP_009600804.1|1e-36PREDICTED: protein yippee-like [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMFN036E13-                                                       TGAATTTTCTTGAACT
                      ____________________________________________________________
consensus                                                         TGAATTTTCTTGAACT
 
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JMFN036E13-           TTACTGCGTTTTTTTGCATTTGAAGAGGTGAAGGCAGATGGGGAGGCTGTTTGTGGTGAG
                      ____________________________________________________________
consensus             TTACTGCGTTTTTTTGCATTTGAAGAGGTGAAGGCAGATGGGGAGGCTGTTTGTGGTGAG
 
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JMFN036E13-           CCTTGAAGGCAAGATCTATAGCTGCAAACACTGTGGAACGCACCTTGCTCTCTCTCAAGA
                      ____________________________________________________________
consensus             CCTTGAAGGCAAGATCTATAGCTGCAAACACTGTGGAACGCACCTTGCTCTCTCTCAAGA
 
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JMFN036E13-           CGTGGTCTCCAGGTCTTTCCAATGCCGACATGGGAAGGCTTATCTCTTCAATAAGGTAGT
                      ____________________________________________________________
consensus             CGTGGTCTCCAGGTCTTTCCAATGCCGACATGGGAAGGCTTATCTCTTCAATAAGGTAGT
 
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JMFN036E13-           GAATGTCACTTGTGGAGCAAATGAAGATCGACACATGATGACTGGCGTGCACACTGTTGC
rJMSF044A15+                                            ATGATGACTGGCGTGCACACTGTTGC
                      ____________________________________________________________
consensus             GAATGTCACTTGTGGAGCAAATGAAGATCGACACATGATGACTGGCGTGCACACTGTTGC
 
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JMFN036E13-           AGACATTTTCTGTGTCTGTTGTGGCTCAATCGTTGGCTGGAAATATGAAACTGCACATGA
rJMSF044A15+          AGACATTTTCTGTGTCTGTTGTGGCTCAATCGTTGGCTGGAAATATGAAACTGCACATGA
                      ____________________________________________________________
consensus             AGACATTTTCTGTGTCTGTTGTGGCTCAATCGTTGGCTGGAAATATGAAACTGCACATGA
 
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JMFN036E13-           CGAGAGTCAAAAGTACAAAGAAGGCAAATCGGTTCTTGAACGGTTTAAGATTTCCGGCCC
rJMSF044A15+          CGAGAGTCAAAAGTACAAAGAAGGCAAATCGGTTCTTGAACGGTTTAAGATTTCCGGCCC
                      ____________________________________________________________
consensus             CGAGAGTCAAAAGTACAAAGAAGGCAAATCGGTTCTTGAACGGTTTAAGATTTCCGGCCC
 
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JMFN036E13-           CGATGGGAGCAGCTACTGGACCAGCCGCGAAACTCGCGCCCCCAGCGACACCGAAGACGT
rJMSF044A15+          CGATGGGAGCAGCTACTGGACCAGCCGCGAAACTCGCGCCCCCAGCGACACCGAAGACGT
                      ____________________________________________________________
consensus             CGATGGGAGCAGCTACTGGACCAGCCGCGAAACTCGCGCCCCCAGCGACACCGAAGACGT
 
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JMFN036E13-           TTGATCACATTTCATCCTTAAACTTCAACTGTACATCCTTCACTCACTAAACTTCTGGAT
rJMSF044A15+          TTGATCACATTTCATCCTTAAACTTCAACTGTACATCCTTCACTCACTAAACTTCTGGAT
                      ____________________________________________________________
consensus             TTGATCACATTTCATCCTTAAACTTCAACTGTACATCCTTCACTCACTAAACTTCTGGAT
 
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JMFN036E13-           TCTGCAATTTCGGGTTAACTTATCCCGCGGTTTTTGCGATGAAACACTGCAACACATTTG
rJMSF044A15+          TCTGCAATTTCGGGTTAACTTATCCCGCGGTTTTTGCGATGAAACACTGCAACACATTTG
                      ____________________________________________________________
consensus             TCTGCAATTTCGGGTTAACTTATCCCGCGGTTTTTGCGATGAAACACTGCAACACATTTG
 
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JMFN036E13-           ATCATCCTTAATCAATGTCTGAACATCTCGTGACTCAGTGGTTGCAGTTTCTAT      
rJMSF044A15+          ATCATCCTTAATCAATGTCTGAACATCTCGTGACTCAGTGGTTGCAGTTTCTATATCATC
                      ____________________________________________________________
consensus             ATCATCCTTAATCAATGTCTGAACATCTCGTGACTCAGTGGTTGCAGTTTCTATATCATC
 
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rJMSF044A15+          ATGAATTCTTAATTTCAGTGAAAAAATTTAGGTACCCAAAAGTCTATCCTACCAGCAATT
                      ____________________________________________________________
consensus             ATGAATTCTTAATTTCAGTGAAAAAATTTAGGTACCCAAAAGTCTATCCTACCAGCAATT
 
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rJMSF044A15+          TATGGTGTTTTTGGTGCTATAATGATTCCAATTCCCAAATAATATGTACAAGATTATGTG
                      ____________________________________________________________
consensus             TATGGTGTTTTTGGTGCTATAATGATTCCAATTCCCAAATAATATGTACAAGATTATGTG