clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFN006D03 | Sequence | 639 | 007216 (5) | ref|XP_009589418.1| | 2e-114 | PREDICTED: probable Xaa-Pro aminopeptidase P [Nicotiana tomentosiformis] | |||||
JMSF018A15 | Sequence | 297 | 013323 (4) | 797 | 007216 (5) | ref|XP_009589418.1| | 4e-135 | PREDICTED: probable Xaa-Pro aminopeptidase P [Nicotiana tomentosiformis] | |||
JMSF025D24 | Sequence | 615 | 013323 (4) | ref|XP_009626586.1| | 8e-122 | PREDICTED: probable Xaa-Pro aminopeptidase P [Nicotiana tomentosiformis] | 744 | 007216 (5) | ref|XP_009589418.1| | 2e-142 | PREDICTED: probable Xaa-Pro aminopeptidase P [Nicotiana tomentosiformis] |
JMSF043O18 | Sequence | 759 | 013323 (4) | ref|XP_006344615.1| | 3e-76 | PREDICTED: probable Xaa-Pro aminopeptidase P-like [Solanum tuberosum] | 569 | 007216 (5) | ref|XP_009589418.1| | 1e-72 | PREDICTED: probable Xaa-Pro aminopeptidase P [Nicotiana tomentosiformis] |
JMSF048P06 | Sequence | 257 | 013323 (4) | 709 | 007216 (5) | ref|XP_009589418.1| | 4e-123 | PREDICTED: probable Xaa-Pro aminopeptidase P [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
JMFN006D03- AAATAGTGCGGAATTGGAAGGCATGCAAAACTGTC
____________________________________________________________
consensus AAATAGTGCGGAATTGGAAGGCATGCAAAACTGTC
. : . : . : . : . : . :
JMFN006D03- ATCTAAGAGATGCTGCTGCTCTAGCACATTTTTGGGCCTGGTTGGAGGAGGAAATCTGCA
____________________________________________________________
consensus ATCTAAGAGATGCTGCTGCTCTAGCACATTTTTGGGCCTGGTTGGAGGAGGAAATCTGCA
. : . : . : . : . : . :
JMFN006D03- AGGATGTGGGTTTAACAGAGGTTCTGGTGCGAATGGTGCGATCATTCATTACAAACCAGA
rJMSF025D24+ AACCAGA
____________________________________________________________
consensus AGGATGTGGGTTTAACAGAGGTTCTGGTGCGAATGGTGCGATCATTCATTACAAACCAGA
. : . : . : . : . : . :
JMFN006D03- GCCTGATAGTTGCAGCATTGTGAATCGACATGAGCTTTTCCTTTTGGATAGTGGTGCTCA
rJMSF025D24+ GCCTGATAGTTGCAGCATTGTGAATCGACATGAGCTTTTCCTTTTGGATAGTGGTGCTCA
rJMSF018A15+ ATCGACATGAGCTTTTCCTTTTGGATAGTGGTGCTCA
____________________________________________________________
consensus GCCTGATAGTTGCAGCATTGTGAATCGACATGAGCTTTTCCTTTTGGATAGTGGTGCTCA
. : . : . : . : . : . :
JMFN006D03- ATATGTTGATGGAACAACTGACATAACAAGGACAGTCCATTTTGGTGAACCATCTTCACG
rJMSF025D24+ ATATGTTGATGGAACAACTGACATAACAAGGACAGTCCATTTTGGTGAACCATCTTCACG
rJMSF048P06+ ACTGACATACCAAGGACAGTCCATTTTGGTGAACCATCTTCACG
rJMSF018A15+ ATATGTTGATGGAACAACTGACATAACAAGGACAGTCCATTTTGGTGAACCATCTTCACG
____________________________________________________________
consensus ATATGTTGATGGAACAACTGACATAACAAGGACAGTCCATTTTGGTGAACCATCTTCACG
. : . : . : . : . : . :
JMFN006D03- AGAGAAAGAATGTTTCACTCGGGTTTTGCAGGGTCACATAGCACTTGACCAGGCTGTCTT
rJMSF025D24+ AGAGAAAGAATGTTTCACTCGGGTTTTGCAGGGTCACATAGCACTTGACCAGGCTGTCTT
rJMSF048P06+ AGAGAAAGAATGTTTCACTCGGGTTTTGCAGGGTCACATAGCACTTGACCAGGCTGTCTT
rJMSF018A15+ AGAGAAAGAATGTTTCACTCGGGTTTTGCAGGGTCACATAGCACTTGACCAGGCTGTCTT
____________________________________________________________
consensus AGAGAAAGAATGTTTCACTCGGGTTTTGCAGGGTCACATAGCACTTGACCAGGCTGTCTT
. : . : . : . : . : . :
JMFN006D03- CCCCGAAAACACTCCAGGTTTTGTACTGGATGCATTTGCTCGATCATCCTTGTGGAAGGT
rJMSF025D24+ CCCCGAAAACACTCCAGGTTTTGTACTGGATGCATTTGCTCGATCATCCTTGTGGAAGGT
rJMSF048P06+ CCCCGAAAACACTCCAGGTTTTGTACTGGATGCATTTGCTCGATCATCCTTGTGGAAGGT
rJMSF018A15+ CCCCGAAAACACTCCAGGTTTTGTACTGGATGCATTTGCTCGATCATCCTTGTGGAAGGT
____________________________________________________________
consensus CCCCGAAAACACTCCAGGTTTTGTACTGGATGCATTTGCTCGATCATCCTTGTGGAAGGT
. : . : . : . : . : . :
JMFN006D03- TGGCCTTGATTACCGACATGGAACTGGGCATGGTGTAGGAGCTGCACTAAATGTTCATGA
rJMSF025D24+ TGGCCTTGATTACCGACATGGAACTGGGCATGGTGTAGGAGCTGCACTAAATGTTCATGA
rJMSF048P06+ TGGCCTTGATTACCGACATGGAACTGGGCATGGTGTAGGAGCTGCACTAAATGTTCATGA
rJMSF018A15+ TGGCCTTGATTACCGACATGGAACTGGGCATGGTGTAGGAGCTGCACTAAATGTTCATGA
rJMSF043O18+ GGTGTAGGAGCTGCACTAAATGTTCATGA
____________________________________________________________
consensus TGGCCTTGATTACCGACATGGAACTGGGCATGGTGTAGGAGCTGCACTAAATGTTCATGA
. : . : . : . : . : . :
JMFN006D03- AGGCCCTCAAGGCATTAGCTTCCGTTTTGGAAACATGACTCCCATGGTGCCAGGCATGGT
rJMSF025D24+ AGGCCCTCAAGGCATTAGCTTCCGTTTTGGAAACATGACTCCCATGGTGCCAGGCATGGT
rJMSF048P06+ AGGCCCTCAAGGCATTAGCTTCCGTTTTGGAAACATGACTCCCATGGTGCCAGGCATGGT
rJMSF018A15+ AGGCCCTCAAGGCATTAGCTTCCGTTTTGGAAACATGACTCCCATGGTGCCAGGCATGGT
rJMSF043O18+ AGGCCCTCAAGGCATTAGCTTCCGTTTTGGAAACATGACTCCCATGGTGCCAGGCATGGT
____________________________________________________________
consensus AGGCCCTCAAGGCATTAGCTTCCGTTTTGGAAACATGACTCCCATGGTGCCAGGCATGGT
. : . : . : . : . : . :
JMFN006D03- AGTCAGCAATGAGCCCGGCTACTATGAAGACCATTCGTTTGGCATTCGGATTGAGAATCT
rJMSF025D24+ AGTCAGCAATGAGCCCGGCTACTATGAAGACCATTCGTTTGGCATTCGGATTGAGAATCT
rJMSF048P06+ AGTCAGCAATGAGCCCGGCTACTATGAAGACCATTCGTTTGGCATTCGGATTGAGAATCT
rJMSF018A15+ AGTCAGCAATGAGCCCGGCTACTATGAAGACCATTCGTTTGGCATTCGGATTGAGAATCT
rJMSF043O18+ AGTCAGCAATGAGCCCGGCTACTATGAAGACCATTCGTTTGGCATTCGGATTGAGAATCT
____________________________________________________________
consensus AGTCAGCAATGAGCCCGGCTACTATGAAGACCATTCGTTTGGCATTCGGATTGAGAATCT
. : . : . : . : . : . :
JMFN006D03- TCTTTATGTCAAGGAAATGGACACTCCAAATCGTTTTGGCGGGATTGGATATCTTGGATT
rJMSF025D24+ TCTTTATGTCAAGGAAATGGACACTCCAAATCGTTTTGGCGGGATTGGATATCTTGGATT
rJMSF048P06+ TCTTTATGTCAAGGAAATGGACACTCCAAATCGTTTTGGCGGGATTGGATATCTTGGATT
rJMSF018A15+ TCTTTATGTCAAGGAAATGGACACTCCAAATCGTTTTGGCGGGATTGGATATCTTGGATT
rJMSF043O18+ TCTTTATGTCAAGGAAATGGACACTCCAAATCGTTTTGGCGGGATTGGATATCTTGGATT
____________________________________________________________
consensus TCTTTATGTCAAGGAAATGGACACTCCAAATCGTTTTGGCGGGATTGGATATCTTGGATT
. : . : . : . : . : . :
JMFN006D03- TGAA
rJMSF025D24+ TGAAAAGCTTACTTTTGTTCCTGTACAGGCTAAATTGGTTGATTTGTCAATACTCTCTGC
rJMSF048P06+ TGAAAAGCTTACTTTTGTTCCTATACAGGCTAAATTGGTTGATTTGTCAATACTCTCTGC
rJMSF018A15+ TGAAAAGCTTACTTTTGTTCCTATACAGGCTAAATTGGTTGATTTGTCAATACTCTCTGC
rJMSF043O18+ TGAAAAGCTTACTTTTGTTCCTATACAGGCTAAATTGGTTGATTTGTCAATACTCTCTGC
____________________________________________________________
consensus TGAAAAGCTTACTTTTGTTCCTATACAGGCTAAATTGGTTGATTTGTCAATACTCTCTGC
. : . : . : . : . : . :
rJMSF025D24+ TGCTGAGGTTGCTTGGCTGAATAGTTACCACTTGCAAGTGTGGGAGAAGGTTTCAGGTTT
rJMSF048P06+ TGCTGAGGTTGCTTGGCTGAATAGTTACCACTTGCAAGTGTGGGAGAAGGTTTCAGGTTT
rJMSF018A15+ TGCTGAGGTTGCTTGGCTGAATAGTTACCACTTGCAAGTGTGGGAGAAGGTTTCAGGTTT
rJMSF043O18+ TGCTGAGGTTGCTTGGCTGAATAGTTACCACTTGCAAGTGTGGGAGAAGGTTTCAGGTTT
____________________________________________________________
consensus TGCTGAGGTTGCTTGGCTGAATAGTTACCACTTGCAAGTGTGGGAGAAGGTTTCAGGTTT
. : . : . : . : . : . :
rJMSF025D24+ AGTGGATGGTCGTGCTCGGGAATGGCTATGGAACAACACAAGGCCTATCGATTCATCTCC
rJMSF048P06+ AGTGGATGGTCGTGCTCGGGAATGGCTATGGAACAACACAAGGCCTATCGATTCATCTCC
rJMSF018A15+ AGTGGATGGTCGTGCTCGGGAATGGCTATGGAACAACACAAGGCCTATCGATTCATCTCC
rJMSF043O18+ AGTGGATGGTCGTGCTCGGGAATGGCTATGGAACAACACAAGGCCTATCGATTCATCTCC
____________________________________________________________
consensus AGTGGATGGTCGTGCTCGGGAATGGCTATGGAACAACACAAGGCCTATCGATTCATCTCC
. : . : . : . : . : . :
rJMSF025D24+ AACTCCTACTTAGTTAGTTAGTTACTCTTTACCGCCATACCCCATACAAATATACGTCTG
rJMSF048P06+ AACTCCTACTTAGTTAGTTAGTTACTCTTTACCGCCATACCCCANACAAATATACGTCTG
rJMSF018A15+ AACTCCTACTTAGTTAGTTAGTTACTCTTTACCGCCATACCCCATACAAATATACGTCTG
rJMSF043O18+ AACTCCTACTTAGTTAGTTAGTTACTCTTTACCGCCATACCCCATACAAATATACGTCTG
____________________________________________________________
consensus AACTCCTACTTAGTTAGTTAGTTACTCTTTACCGCCATACCCCATACAAATATACGTCTG
. : . : . : . : . : . :
rJMSF025D24+ TTGTGTATATCAAGCAT
rJMSF048P06+ TTGTGTATATCAAGCATTCAACCCTAAATATTTGTTCCAGTATGTCAAACTTAATTCGCT
rJMSF018A15+ TTGTGTATATCAAGCATTCAACCCTAAATATTTGTTCCAGTATGTCAAACTTAATTCGCT
rJMSF043O18+ TTGTGTATATCAAGCATTCAACCCTAAATATTTGTTCCAGTATGTCAAACTTAATTCGCT
____________________________________________________________
consensus TTGTGTATATCAAGCATTCAACCCTAAATATTTGTTCCAGTATGTCAAACTTAATTCGCT
. : . : . : . : . : . :
rJMSF048P06+ GTATT
rJMSF018A15+ GTATTTGTCTAGTTCAAGTTTG
rJMSF043O18+ GTATTTGTCTAGTTCAAGTTTGGTGTATGTATGGAATAGTCCAAAAATGAAAATATGCTA
____________________________________________________________
consensus GTATTTGTCTAGTTCAAGTTTGGTGTATGTATGGAATAGTCCAAAAATGAAAATATGCTA