Contig 007212:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF043H14-                                                                  GGAAT
                      ____________________________________________________________
consensus                                                                    GGAAT
 
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JMSF043H14-           GTTTACTCTAGACGGGCAACTGCATCAGTGCTTAGTAGAACTTTTGAGAAAAATGGCAGT
                      ____________________________________________________________
consensus             GTTTACTCTAGACGGGCAACTGCATCAGTGCTTAGTAGAACTTTTGAGAAAAATGGCAGT
 
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JMSF043H14-           GTAGCTGTTGAAGATATTGACTGGGATGCTCTTACCGTCAAAGGAACCTGCCAACAAATT
                      ____________________________________________________________
consensus             GTAGCTGTTGAAGATATTGACTGGGATGCTCTTACCGTCAAAGGAACCTGCCAACAAATT
 
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JMSF043H14-           GAAAAACGTTATTTACGGCTTACTTCTGCACCTGATCCTGCCACGGTAAGACCTGAAGAA
                      ____________________________________________________________
consensus             GAAAAACGTTATTTACGGCTTACTTCTGCACCTGATCCTGCCACGGTAAGACCTGAAGAA
 
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JMSF043H14-           GTGTTGGAGAAAGCTCTACTTATGGTTCAAAATTCCCCAAAAAATTACCTATACAAATGT
                      ____________________________________________________________
consensus             GTGTTGGAGAAAGCTCTACTTATGGTTCAAAATTCCCCAAAAAATTACCTATACAAATGT
 
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JMSF043H14-           GACCAATTAAAATCTATACGTCAAGACCTTACTGTACAACGCATACGTAATGAGCTGACA
                      ____________________________________________________________
consensus             GACCAATTAAAATCTATACGTCAAGACCTTACTGTACAACGCATACGTAATGAGCTGACA
 
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JMSF043H14-           GTTAGGGTTTATGAAACACATGCTCGATTAGCGATTGAAGTTGGAGACTTGGCAGAATTT
                      ____________________________________________________________
consensus             GTTAGGGTTTATGAAACACATGCTCGATTAGCGATTGAAGTTGGAGACTTGGCAGAATTT
 
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JMSF043H14-           AATCAGTGCCAGTCACAACT-GAAAACACTTTATGCAGAAGGAATCAATGGATGTCATAT
rJMSF043H14+          AATCAGTGCCAGTCACAACTGGAAANCACTTTATGCAGAAGGAATCAATGGATGTCATAT
                      ____________________________________________________________
consensus             AATCAGTGCCAGTCACAACTGGAAAACACTTTATGCAGAAGGAATCAATGGATGTCATAT
 
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JMSF043H14-           GGAACTTGCAGCATATAATTTACTTTGTGCACTTCTGCACTCCCACAACAAGAGAGATCT
rJMSF043H14+          GGAACNTGCAGCATATAATTTACTTTGTGCACTTCTGCACTCCCACAACAAGAGAGATCT
                      ____________________________________________________________
consensus             GGAACTTGCAGCATATAATTTACTTTGTGCACTTCTGCACTCCCACAACAAGAGAGATCT
 
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JMSF043H14-           CCTATCGACAATGTCAAGATTATCAGCTGAAGCTAGGGAGAACACAGCTGTTAAACATGC
rJMSF043H14+          CCTATCGACAATGTCAAGATTATCAGCTGAAGCTAGGGAGAACACAGCTGTTAAACATGC
                      ____________________________________________________________
consensus             CCTATCGACAATGTCAAGATTATCAGCTGAAGCTAGGGAGAACACAGCTGTTAAACATGC
 
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JMSF043H14-           TCTTTCAGTTCGTACAGCAGTGACCTCTGAAAACTATGTGCTGTTTTTCAAACTATACAG
rJMSF043H14+          TCTTTCAGTTCGTACAGCAGTGACCTCTGAAAACTATGTGCTGTTTTTCAAACTATACAG
                      ____________________________________________________________
consensus             TCTTTCAGTTCGTACAGCAGTGACCTCTGAAAACTATGTGCTGTTTTTCAAACTATACAG
 
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JMSF043H14-           AACAGCTCCCAACCTCAACAGCTGTCTCATGGATCTTTATGTTGAAAAGATGCGGTATGC
rJMSF043H14+          AACAGCTCCCAACCTCAACAGCTGTCTCATGGATCTTTATGTTGAAAAGATGCGGTATGC
                      ____________________________________________________________
consensus             AACAGCTCCCAACCTCAACAGCTGTCTCATGGATCTTTATGTTGAAAAGATGCGGTATGC
 
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JMSF043H14-           AGCTGTAAGATGTATGTCTCGTTCATATCGTCCTACAGTTCCTATACCCTATGTTGCTCA
rJMSF043H14+          AGCTGTAAGATGTATGTCTCGTTCATATCGTCCTACAGTTCCTATACCCTATGTTGCTCA
                      ____________________________________________________________
consensus             AGCTGTAAGATGTATGTCTCGTTCATATCGTCCTACAGTTCCTATACCCTATGTTGCTCA
 
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JMSF043H14-           GGTTTTAGGGTTCACTTCTGTCATGCCCACAACTGAAGTCAGTGATGCGG          
rJMSF043H14+          GGTTTTAGGGTTCACTTCTGTCATGCCCACAACTGAAGTCAGTGATGCGGAGAGAGATGG
                      ____________________________________________________________
consensus             GGTTTTAGGGTTCACTTCTGTCATGCCCACAACTGAAGTCAGTGATGCGGAGAGAGATGG
 
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rJMSF043H14+          TGTGGAGGAATGTATAGAATGGTTGAAGGCACACGGTGCATGCCTTACTTCGGATAATTC
                      ____________________________________________________________
consensus             TGTGGAGGAATGTATAGAATGGTTGAAGGCACACGGTGCATGCCTTACTTCGGATAATTC
 
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rJMSF043H14+          TGGAGAGATGCAACTTGATACCAAAGCATCCACATCAAGCCTTTTCATGCCAGAACCTGA
                      ____________________________________________________________
consensus             TGGAGAGATGCAACTTGATACCAAAGCATCCACATCAAGCCTTTTCATGCCAGAACCTGA
 
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rJMSF043H14+          AGATGCTGTGGCGCATGGAGACGCGAGTCTTGCAGTAAGTGATTTTTTGACCCGCAATCT
                      ____________________________________________________________
consensus             AGATGCTGTGGCGCATGGAGACGCGAGTCTTGCAGTAAGTGATTTTTTGACCCGCAATCT
 
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rJMSF043H14+          TGTTGTATGATTAAAAGAACCCTCAAAATGCTGTATTCAGTAATGGGCATTTTGACTAGT
                      ____________________________________________________________
consensus             TGTTGTATGATTAAAAGAACCCTCAAAATGCTGTATTCAGTAATGGGCATTTTGACTAGT
 
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rJMSF043H14+          TTTAGCTCTTCCTGTTAAATCTTTGTTTGTTTTGGAGAAGCGCTCAATTCTTCTTTACAT
                      ____________________________________________________________
consensus             TTTAGCTCTTCCTGTTAAATCTTTGTTTGTTTTGGAGAAGCGCTCAATTCTTCTTTACAT
 
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rJMSF043H14+          GTAAGAAGATACAAATTTAATGCATATAGCTGAGCAGAAATCATTGTAAGCAAATGGAAG
                      ____________________________________________________________
consensus             GTAAGAAGATACAAATTTAATGCATATAGCTGAGCAGAAATCATTGTAAGCAAATGGAAG