Contig 007210:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS084H01Sequence214007210 (2)
JMSF043D05Sequence721000456 (2)ref|XP_009759587.1|1e-39PREDICTED: AT-rich interactive domain-containing protein 4-like [Nicotiana sylv241007210 (2)

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS084H01+ ATTTTAAAATTTCACAATTCCA
                      ____________________________________________________________
consensus ATTTTAAAATTTCACAATTCCA
 
. : . : . : . : . : . :
JMFS084H01+ TTACTAAAAATACACAATTTATACGTCGTTTAGGACCAGAATCCACCTCCACCTTACAAT
                      ____________________________________________________________
consensus TTACTAAAAATACACAATTTATACGTCGTTTAGGACCAGAATCCACCTCCACCTTACAAT
 
. : . : . : . : . : . :
JMFS084H01+ AGACCCTGGTCCATGGTATAACTCAGAGAAATGTGCATTAACTAGTAACTACACTGATAA
rJMSF043D05- A
                      ____________________________________________________________
consensus AGACCCTGGTCCATGGTATAACTCAGAGAAATGTGCATTAACTAGTAACTACACTGATAA
 
. : . : . : . : . : . :
JMFS084H01+ AGCTACAATTACAAAATGGTTTATGGATATATATATTACACCACTCACTCACTCATCCTT
rJMSF043D05- AGCTACAATTACAAAATGGTTTATGGATATATATATTACACCACTCACTCACTCATCCTT
                      ____________________________________________________________
consensus AGCTACAATTACAAAATGGTTTATGGATATATATATTACACCACTCACTCACTCATCCTT
 
. : . : . : . : . : . :
JMFS084H01+ GCTGTTACACTT
rJMSF043D05- GCTGTTACACTTTTTTCACTTTCTTGCTTCTATTTTCCCTACTTTCCACTATTTGTCCCC
                      ____________________________________________________________
consensus GCTGTTACACTTTTTTCACTTTCTTGCTTCTATTTTCCCTACTTTCCACTATTTGTCCCC
 
. : . : . : . : . : . :
rJMSF043D05- AACAGCTTAAACTTACCTATGCCCTAAATATCACATGACTCTACGCAGTAACAAGAAGAT
                      ____________________________________________________________
consensus AACAGCTTAAACTTACCTATGCCCTAAATATCACATGACTCTACGCAGTAACAAGAAGAT
 
. : . : . : . : . : . :
rJMSF043D05- CTAACTATGCAGAGAGGCAGAACAAAAAAAAAAAANTNNCAAAANAAATTTTAAACAAAA
                      ____________________________________________________________
consensus CTAACTATGCAGAGAGGCAGAACAAAAAAAAAAAANTNNCAAAANAAATTTTAAACAAAA